BLASTX nr result

ID: Atractylodes22_contig00006231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006231
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002868863.1| hypothetical protein ARALYDRAFT_490642 [Arab...    70   2e-10
ref|NP_178124.2| Pre-mRNA-processing-splicing factor [Arabidopsi...    70   2e-10
ref|NP_195589.2| Pre-mRNA-processing-splicing factor [Arabidopsi...    70   2e-10
gb|AEW09276.1| Pinus taeda anonymous locus UMN_2001_01 genomic s...    70   2e-10
ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact...    70   2e-10

>ref|XP_002868863.1| hypothetical protein ARALYDRAFT_490642 [Arabidopsis lyrata subsp.
            lyrata] gi|297314699|gb|EFH45122.1| hypothetical protein
            ARALYDRAFT_490642 [Arabidopsis lyrata subsp. lyrata]
          Length = 2332

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -2

Query: 413  SPQDVTFHARILENIKQWDGEKSIILTCNFTPGSYSLTPF 294
            SPQDVTFH+R+LEN KQWDGEK IILTC+FTPGS SL  +
Sbjct: 2188 SPQDVTFHSRVLENNKQWDGEKCIILTCSFTPGSCSLMSY 2227


>ref|NP_178124.2| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana]
            gi|5902365|gb|AAD55467.1|AC009322_7 Putative splicing
            factor Prp8 [Arabidopsis thaliana]
            gi|332198232|gb|AEE36353.1| Pre-mRNA-processing-splicing
            factor [Arabidopsis thaliana]
          Length = 2359

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -2

Query: 413  SPQDVTFHARILENIKQWDGEKSIILTCNFTPGSYSLTPF 294
            SPQDVT H+RILEN KQWDGEK IILTC+FTPGS SLT +
Sbjct: 2213 SPQDVTSHSRILENNKQWDGEKCIILTCSFTPGSCSLTSY 2252


>ref|NP_195589.2| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana]
            gi|332661573|gb|AEE86973.1| Pre-mRNA-processing-splicing
            factor [Arabidopsis thaliana]
          Length = 2332

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = -2

Query: 413  SPQDVTFHARILENIKQWDGEKSIILTCNFTPGSYSLTPF 294
            SPQDVTFH R+LEN KQWD EK IILTC+FTPGS SLT +
Sbjct: 2188 SPQDVTFHTRVLENNKQWDAEKCIILTCSFTPGSCSLTSY 2227


>gb|AEW09276.1| Pinus taeda anonymous locus UMN_2001_01 genomic sequence
           gi|361069931|gb|AEW09277.1| Pinus taeda anonymous locus
           UMN_2001_01 genomic sequence gi|376340358|gb|AFB34690.1|
           hypothetical protein UMN_2001_01, partial [Pinus cembra]
           gi|376340360|gb|AFB34691.1| hypothetical protein
           UMN_2001_01, partial [Pinus cembra]
           gi|376340362|gb|AFB34692.1| hypothetical protein
           UMN_2001_01, partial [Pinus cembra]
           gi|376340364|gb|AFB34693.1| hypothetical protein
           UMN_2001_01, partial [Pinus cembra]
           gi|376340366|gb|AFB34694.1| hypothetical protein
           UMN_2001_01, partial [Pinus cembra]
           gi|376340368|gb|AFB34695.1| hypothetical protein
           UMN_2001_01, partial [Pinus cembra]
           gi|376340370|gb|AFB34696.1| hypothetical protein
           UMN_2001_01, partial [Pinus cembra]
           gi|383176538|gb|AFG71821.1| Pinus taeda anonymous locus
           UMN_2001_01 genomic sequence gi|383176539|gb|AFG71822.1|
           Pinus taeda anonymous locus UMN_2001_01 genomic sequence
           gi|383176540|gb|AFG71823.1| Pinus taeda anonymous locus
           UMN_2001_01 genomic sequence gi|383176542|gb|AFG71824.1|
           Pinus taeda anonymous locus UMN_2001_01 genomic sequence
           gi|383176543|gb|AFG71825.1| Pinus taeda anonymous locus
           UMN_2001_01 genomic sequence gi|383176544|gb|AFG71826.1|
           Pinus taeda anonymous locus UMN_2001_01 genomic sequence
           gi|383176545|gb|AFG71827.1| Pinus taeda anonymous locus
           UMN_2001_01 genomic sequence gi|383176546|gb|AFG71828.1|
           Pinus taeda anonymous locus UMN_2001_01 genomic sequence
           gi|383176547|gb|AFG71829.1| Pinus taeda anonymous locus
           UMN_2001_01 genomic sequence gi|383176549|gb|AFG71830.1|
           Pinus taeda anonymous locus UMN_2001_01 genomic sequence
           gi|383176550|gb|AFG71831.1| Pinus taeda anonymous locus
           UMN_2001_01 genomic sequence gi|383176551|gb|AFG71832.1|
           Pinus taeda anonymous locus UMN_2001_01 genomic sequence
           gi|383176552|gb|AFG71833.1| Pinus taeda anonymous locus
           UMN_2001_01 genomic sequence gi|383176554|gb|AFG71834.1|
           Pinus taeda anonymous locus UMN_2001_01 genomic sequence
          Length = 134

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -2

Query: 413 SPQDVTFHARILENIKQWDGEKSIILTCNFTPGSYSLTPF 294
           SPQD+T HARILEN KQWDGEK IILTC+FTPGS SLT +
Sbjct: 72  SPQDLTCHARILENNKQWDGEKCIILTCSFTPGSCSLTAY 111


>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
            [Vitis vinifera]
          Length = 2367

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -2

Query: 413  SPQDVTFHARILENIKQWDGEKSIILTCNFTPGSYSLTPF 294
            SPQD+T HARILEN KQWDGEK IILTC+FTPGS SLT +
Sbjct: 2221 SPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAY 2260


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