BLASTX nr result

ID: Atractylodes22_contig00006209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006209
         (1104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplast...   392   e-107
gb|AAN31832.1| putative chloroplast translation elongation facto...   392   e-107
ref|NP_193769.1| Elongation factor Tu [Arabidopsis thaliana] gi|...   392   e-107
ref|XP_002304468.1| predicted protein [Populus trichocarpa] gi|2...   391   e-106
ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplast...   390   e-106

>ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplastic-like [Vitis
           vinifera]
          Length = 486

 Score =  392 bits (1008), Expect = e-107
 Identities = 194/214 (90%), Positives = 203/214 (94%)
 Frame = -3

Query: 643 GGGVAKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQM 464
           G    KKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQM
Sbjct: 117 GNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQM 176

Query: 463 DGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVDMEVRELLS 284
           DGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLV++EVRELLS
Sbjct: 177 DGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLS 236

Query: 283 SYEFPGDDIPIISGSALLALEALTENPKITKGENKWVDKIYELMEAVDDYIAIPQRQTDL 104
           SYEFPGDD+PIISGSALLALEAL  NP I +GEN+WVDKIYELM++VD YI IPQRQTDL
Sbjct: 237 SYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDL 296

Query: 103 PFLCAIEDVFSITGRGTVATGRVERGTVKVGESV 2
           PFL AIEDVFSITGRGTVATGRVERGT+KVGE+V
Sbjct: 297 PFLLAIEDVFSITGRGTVATGRVERGTIKVGETV 330


>gb|AAN31832.1| putative chloroplast translation elongation factor EF-Tu precursor
           [Arabidopsis thaliana]
          Length = 476

 Score =  392 bits (1007), Expect = e-107
 Identities = 193/214 (90%), Positives = 206/214 (96%)
 Frame = -3

Query: 643 GGGVAKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQM 464
           G  VAKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQM
Sbjct: 107 GSSVAKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQM 166

Query: 463 DGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVDMEVRELLS 284
           DGAILVVSGADGPMPQTKEHILLAKQVGVP+MVVFLNK+DQVDD ELL+LV++EVRELLS
Sbjct: 167 DGAILVVSGADGPMPQTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLS 226

Query: 283 SYEFPGDDIPIISGSALLALEALTENPKITKGENKWVDKIYELMEAVDDYIAIPQRQTDL 104
           SYEF GDDIPIISGSALLA+E LTENPK+ +G+NKWVDKIYELM+AVDDYI IPQRQT+L
Sbjct: 227 SYEFNGDDIPIISGSALLAVETLTENPKVKRGDNKWVDKIYELMDAVDDYIPIPQRQTEL 286

Query: 103 PFLCAIEDVFSITGRGTVATGRVERGTVKVGESV 2
           PFL A+EDVFSITGRGTVATGRVERGTVKVGE+V
Sbjct: 287 PFLLAVEDVFSITGRGTVATGRVERGTVKVGETV 320


>ref|NP_193769.1| Elongation factor Tu [Arabidopsis thaliana]
           gi|119194|sp|P17745.1|EFTU_ARATH RecName:
           Full=Elongation factor Tu, chloroplastic; Short=EF-Tu;
           AltName: Full=Ras-related protein RABE1b;
           Short=AtRABE1b; AltName: Full=Ras-related protein Rab8D;
           Short=AtRab8D; Flags: Precursor
           gi|15294276|gb|AAK95315.1|AF410329_1 AT4g20360/F9F13_10
           [Arabidopsis thaliana]
           gi|16930511|gb|AAL31941.1|AF419609_1 AT4g20360/F9F13_10
           [Arabidopsis thaliana] gi|22565|emb|CAA36498.1|
           elongation factor Tu precursor [Arabidopsis thaliana]
           gi|5738381|emb|CAB45802.2| translation elongation factor
           EF-Tu precursor, chloroplast [Arabidopsis thaliana]
           gi|7268831|emb|CAB79036.1| translation elongation factor
           EF-Tu precursor, chloroplast [Arabidopsis thaliana]
           gi|18377803|gb|AAL67051.1| putative translation
           elongation factor EF-Tu precursor, chloroplast
           [Arabidopsis thaliana] gi|23397118|gb|AAN31843.1|
           putative chloroplast translation elongation factor EF-Tu
           precursor [Arabidopsis thaliana]
           gi|24030503|gb|AAN41398.1| putative translation
           elongation factor EF-Tu precursor, chloroplast
           [Arabidopsis thaliana] gi|27363278|gb|AAO11558.1|
           At4g20360/F9F13_10 [Arabidopsis thaliana]
           gi|332658913|gb|AEE84313.1| Elongation factor Tu
           [Arabidopsis thaliana] gi|226817|prf||1607332A
           elongation factor Tu
          Length = 476

 Score =  392 bits (1007), Expect = e-107
 Identities = 193/214 (90%), Positives = 206/214 (96%)
 Frame = -3

Query: 643 GGGVAKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQM 464
           G  VAKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQM
Sbjct: 107 GSSVAKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQM 166

Query: 463 DGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVDMEVRELLS 284
           DGAILVVSGADGPMPQTKEHILLAKQVGVP+MVVFLNK+DQVDD ELL+LV++EVRELLS
Sbjct: 167 DGAILVVSGADGPMPQTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLS 226

Query: 283 SYEFPGDDIPIISGSALLALEALTENPKITKGENKWVDKIYELMEAVDDYIAIPQRQTDL 104
           SYEF GDDIPIISGSALLA+E LTENPK+ +G+NKWVDKIYELM+AVDDYI IPQRQT+L
Sbjct: 227 SYEFNGDDIPIISGSALLAVETLTENPKVKRGDNKWVDKIYELMDAVDDYIPIPQRQTEL 286

Query: 103 PFLCAIEDVFSITGRGTVATGRVERGTVKVGESV 2
           PFL A+EDVFSITGRGTVATGRVERGTVKVGE+V
Sbjct: 287 PFLLAVEDVFSITGRGTVATGRVERGTVKVGETV 320


>ref|XP_002304468.1| predicted protein [Populus trichocarpa] gi|222841900|gb|EEE79447.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  391 bits (1005), Expect = e-106
 Identities = 193/214 (90%), Positives = 204/214 (95%)
 Frame = -3

Query: 643 GGGVAKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQM 464
           GG   KKYDEIDAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQM
Sbjct: 56  GGSAPKKYDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQM 115

Query: 463 DGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVDMEVRELLS 284
           DGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLV++EVRELLS
Sbjct: 116 DGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLS 175

Query: 283 SYEFPGDDIPIISGSALLALEALTENPKITKGENKWVDKIYELMEAVDDYIAIPQRQTDL 104
           SYEFPGDDIPIISGSALLALEAL ENP I +GEN+WVDKIYELM+ VD+YI IPQRQTDL
Sbjct: 176 SYEFPGDDIPIISGSALLALEALMENPAIKRGENQWVDKIYELMDNVDNYIPIPQRQTDL 235

Query: 103 PFLCAIEDVFSITGRGTVATGRVERGTVKVGESV 2
           PFL A+EDVFSITGRGTVATGRVERGT+K G++V
Sbjct: 236 PFLLAVEDVFSITGRGTVATGRVERGTIKTGDTV 269


>ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform 1
           [Vitis vinifera] gi|359488736|ref|XP_003633809.1|
           PREDICTED: elongation factor Tu, chloroplastic-like
           isoform 2 [Vitis vinifera]
           gi|359488738|ref|XP_003633810.1| PREDICTED: elongation
           factor Tu, chloroplastic-like isoform 3 [Vitis vinifera]
          Length = 487

 Score =  390 bits (1002), Expect = e-106
 Identities = 192/214 (89%), Positives = 203/214 (94%)
 Frame = -3

Query: 643 GGGVAKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQM 464
           G    KKYDEIDAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQM
Sbjct: 118 GNSAPKKYDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQM 177

Query: 463 DGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVDMEVRELLS 284
           DGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLV++EVRELL+
Sbjct: 178 DGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLA 237

Query: 283 SYEFPGDDIPIISGSALLALEALTENPKITKGENKWVDKIYELMEAVDDYIAIPQRQTDL 104
           SYEFPGDDIPI+SGSALLALEAL  NP I +GEN+WVDKIYELM+AVD YI IPQRQTDL
Sbjct: 238 SYEFPGDDIPIVSGSALLALEALMANPSIKRGENEWVDKIYELMDAVDSYIPIPQRQTDL 297

Query: 103 PFLCAIEDVFSITGRGTVATGRVERGTVKVGESV 2
           PFL A+EDVFSITGRGTVATGRVERGT+KVGE+V
Sbjct: 298 PFLLAVEDVFSITGRGTVATGRVERGTIKVGETV 331


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