BLASTX nr result

ID: Atractylodes22_contig00006197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006197
         (1940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...   388   e-105
emb|CBI30994.3| unnamed protein product [Vitis vinifera]              381   e-103
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm...   376   e-101
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec...   376   e-101
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec...   371   e-100

>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Vitis vinifera]
          Length = 673

 Score =  388 bits (997), Expect = e-105
 Identities = 226/402 (56%), Positives = 244/402 (60%), Gaps = 2/402 (0%)
 Frame = -2

Query: 1939 VLQKIQQLTSYNYGNSNRFFQNRNANHSQQSEKFQFPQGNNDMN--QVTKPTTTDXXXXX 1766
            V QKIQQL+S+NYG+SNRF+QNRN  ++QQ+EK Q  QG+N +N   V K +TT+     
Sbjct: 150  VFQKIQQLSSFNYGSSNRFYQNRNP-YNQQTEKSQILQGSNAVNLGTVAKSSTTEAINVQ 208

Query: 1765 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKTSIPLPQGTSRYFIVKSCN 1586
                                                    KT+ PLPQG SRYFIVKSCN
Sbjct: 209  QQQVQPPQQQVSQTPMQNLPNGLPNQAN------------KTASPLPQGISRYFIVKSCN 256

Query: 1585 RENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSKTGGSVG 1406
            RENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSK GG VG
Sbjct: 257  RENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSKIGGFVG 316

Query: 1405 GGNWKYEHGTAHYGRNFCVRWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGE 1226
            GGNWKY HGTAHYGRNF V+WLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGE
Sbjct: 317  GGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGE 376

Query: 1225 QLASLLYLEPDSELMAISLXXXXXXXXXXXKGVNPENASENPDIVPXXXXXXXXXXXXXX 1046
            QLASLLYLEPDSELMAISL           KGVNP+N  ENPDIVP              
Sbjct: 377  QLASLLYLEPDSELMAISLAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESEE 436

Query: 1045 XXXXXEQGFGLAAQXXXXXXGMIWXXXXXXXXXXXXXXXXXXXXXXMNMMGADGFSYXXX 866
                  Q  G AAQ      G++W                        MMGADGFSY   
Sbjct: 437  EEESFGQALGPAAQGRGRGRGIMWPPHMPLARGARPIPSMRGFPPV--MMGADGFSYSAV 494

Query: 865  XXXXXXXXDLLNMXXXXXXXXXXXFSGDFQRPPFSGMMFHGR 740
                    D+  +           FSGDF  P  SGMMF GR
Sbjct: 495  PPDGFAMPDIFGVGPRAFPPYGPRFSGDFTGPA-SGMMFPGR 535



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 57/122 (46%), Positives = 62/122 (50%), Gaps = 19/122 (15%)
 Frame = -1

Query: 596 GPGRAPFMXXXXXXXXXXXR---PVYXXXXXXXXXXQNT--SRPKRDQMALGG--NDRYS 438
           GPGRAPFM           R   PV            N+  +R KRDQ       NDRYS
Sbjct: 552 GPGRAPFMGGMGVPAAAPTRAGRPVGMPPMFPPPPPPNSQNNRTKRDQRTPVNDRNDRYS 611

Query: 437 GGGSQPMGQDIGRPDDEAQP------------GAETTFKNGESESEDEAPRRSRHGEGKK 294
           GG  Q  GQD+  PDDE Q             G   +F+N ESESEDEAPRRSRHGEGKK
Sbjct: 612 GGSDQGRGQDMAGPDDETQYLQGLKSQQDDQFGGGNSFRNDESESEDEAPRRSRHGEGKK 671

Query: 293 KR 288
           KR
Sbjct: 672 KR 673


>emb|CBI30994.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  381 bits (978), Expect = e-103
 Identities = 222/398 (55%), Positives = 241/398 (60%), Gaps = 2/398 (0%)
 Frame = -2

Query: 1939 VLQKIQQLTSYNYGNSNRFFQNRNANHSQQSEKFQFPQGNNDMN--QVTKPTTTDXXXXX 1766
            V QKIQQL+S+NYG+SNRF+QNRN  ++QQ+EK Q  QG+N +N   V K +TT+     
Sbjct: 77   VFQKIQQLSSFNYGSSNRFYQNRNP-YNQQTEKSQILQGSNAVNLGTVAKSSTTEAINVQ 135

Query: 1765 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKTSIPLPQGTSRYFIVKSCN 1586
                                                    KT+ PLPQG SRYFIVKSCN
Sbjct: 136  QQQVQPPQQQVSQTPMQNLPNGLPNQAN------------KTASPLPQGISRYFIVKSCN 183

Query: 1585 RENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSKTGGSVG 1406
            RENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSK GG VG
Sbjct: 184  RENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSKIGGFVG 243

Query: 1405 GGNWKYEHGTAHYGRNFCVRWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGE 1226
            GGNWKY HGTAHYGRNF V+WLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGE
Sbjct: 244  GGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGE 303

Query: 1225 QLASLLYLEPDSELMAISLXXXXXXXXXXXKGVNPENASENPDIVPXXXXXXXXXXXXXX 1046
            QLASLLYLEPDSELMAISL           KGVNP+N  ENPDIVP              
Sbjct: 304  QLASLLYLEPDSELMAISLAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESEE 363

Query: 1045 XXXXXEQGFGLAAQXXXXXXGMIWXXXXXXXXXXXXXXXXXXXXXXMNMMGADGFSYXXX 866
                  Q  G AAQ      G++W                        MMGADGFSY   
Sbjct: 364  EEESFGQALGPAAQGRGRGRGIMWPPHMPLARGARPIPSMRGFPPV--MMGADGFSYSAV 421

Query: 865  XXXXXXXXDLLNMXXXXXXXXXXXFSGDFQRPPFSGMM 752
                    D+  +           FSGDF  P  SGM+
Sbjct: 422  PPDGFAMPDIFGVGPRAFPPYGPRFSGDFTGPA-SGMI 458


>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
            gi|223537608|gb|EEF39232.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 702

 Score =  376 bits (966), Expect = e-101
 Identities = 219/402 (54%), Positives = 232/402 (57%), Gaps = 2/402 (0%)
 Frame = -2

Query: 1939 VLQKIQQLTSYNYGNSNRFFQNRNANHSQQSEKFQFPQGNNDMNQ--VTKPTTTDXXXXX 1766
            VLQKIQQL SYNYG+SN+FFQ R A   Q ++K QF QG N+M Q    KP  T+     
Sbjct: 163  VLQKIQQLNSYNYGSSNKFFQQRGAGFQQHADKSQFSQGPNNMGQGMAAKPPGTESANVQ 222

Query: 1765 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKTSIPLPQGTSRYFIVKSCN 1586
                                                    +T+IPLPQG SRYFIVKSCN
Sbjct: 223  QPQQQQPQPGQGQQSQQQATQTPTQNLPNGQPNQAN----RTAIPLPQGISRYFIVKSCN 278

Query: 1585 RENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSKTGGSVG 1406
            RENLELSVQQGVWATQRSNEAKLNEAFDS ENVILIFSVNRTRHFQGCAKMTSK G SVG
Sbjct: 279  RENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGASVG 338

Query: 1405 GGNWKYEHGTAHYGRNFCVRWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGE 1226
            GGNWKY HGTAHYGRNF V+WLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPS+G 
Sbjct: 339  GGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSVGG 398

Query: 1225 QLASLLYLEPDSELMAISLXXXXXXXXXXXKGVNPENASENPDIVPXXXXXXXXXXXXXX 1046
            QLA LLY EPDSELMAISL           KGVNPEN  +NPDIVP              
Sbjct: 399  QLACLLYDEPDSELMAISLAAEAKREEEKAKGVNPENGGDNPDIVPFEDNEEEEEEESEE 458

Query: 1045 XXXXXEQGFGLAAQXXXXXXGMIWXXXXXXXXXXXXXXXXXXXXXXMNMMGADGFSYXXX 866
                  Q  G   Q      G+IW                        MMGAD FSY   
Sbjct: 459  EEESFGQALGAPGQGRGRGRGIIWPHMPLARGARPIPGMRGFPPM---MMGADSFSYGPV 515

Query: 865  XXXXXXXXDLLNMXXXXXXXXXXXFSGDFQRPPFSGMMFHGR 740
                    DL  +           FSGDF     SGMMF GR
Sbjct: 516  TPDGFGMPDLFGVAPRGFTPYAPRFSGDFTGAA-SGMMFPGR 556



 Score = 87.8 bits (216), Expect = 9e-15
 Identities = 58/129 (44%), Positives = 64/129 (49%), Gaps = 14/129 (10%)
 Frame = -1

Query: 596 GPGRAPFMXXXXXXXXXXXRPVYXXXXXXXXXXQ-NTSRPKRDQMALGGNDRYSGGGSQP 420
           GPGRAPFM           R  +            +  RP +    +  NDRYS G  Q 
Sbjct: 574 GPGRAPFMGGMGPNSTNPLRGNWPGGMPFPPLPTPSPQRPVKRDQRMTANDRYSTGSDQG 633

Query: 419 MGQDIGRPDDEA-------------QPGAETTFKNGESESEDEAPRRSRHGEGKKKRRSS 279
                G PDDEA             Q GA  +F+N ESESEDEAPRRSRHGEGKKKRR S
Sbjct: 634 RNT-AGEPDDEARYQQEGLKASHEDQFGAGNSFRNDESESEDEAPRRSRHGEGKKKRRGS 692

Query: 278 EGDAATTSD 252
           EGDA   SD
Sbjct: 693 EGDATPGSD 701


>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 681

 Score =  376 bits (965), Expect = e-101
 Identities = 219/400 (54%), Positives = 234/400 (58%)
 Frame = -2

Query: 1939 VLQKIQQLTSYNYGNSNRFFQNRNANHSQQSEKFQFPQGNNDMNQVTKPTTTDXXXXXXX 1760
            VLQKIQ L SYNY +SN+FFQ R A+++QQ+EK   PQGNN  NQ               
Sbjct: 160  VLQKIQHLYSYNYNSSNKFFQQRGASYNQQAEKPLLPQGNNSTNQ---------GVTGNP 210

Query: 1759 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKTSIPLPQGTSRYFIVKSCNRE 1580
                                                 N+T+ PLPQG SRYFIVKSCNRE
Sbjct: 211  LPAELGNAQPQQQVQQSQQQVNQSQMQNVANGQPNQANRTATPLPQGISRYFIVKSCNRE 270

Query: 1579 NLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSKTGGSVGGG 1400
            NLELSVQQGVWATQRSNE+KLNEAFDSVENVILIFSVNRTRHFQGCAKMTSK GGSV GG
Sbjct: 271  NLELSVQQGVWATQRSNESKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSKIGGSVAGG 330

Query: 1399 NWKYEHGTAHYGRNFCVRWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQL 1220
            NWKY HGTAHYGRNF V+WLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQL
Sbjct: 331  NWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQL 390

Query: 1219 ASLLYLEPDSELMAISLXXXXXXXXXXXKGVNPENASENPDIVPXXXXXXXXXXXXXXXX 1040
            ASLLYLEPDSELMAIS+           KGVNP+N  ENPDIVP                
Sbjct: 391  ASLLYLEPDSELMAISVAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEE 450

Query: 1039 XXXEQGFGLAAQXXXXXXGMIWXXXXXXXXXXXXXXXXXXXXXXMNMMGADGFSYXXXXX 860
                 G G A Q      GM+W                        MMG DG SY     
Sbjct: 451  ESFGHGVGPAGQGRGRGRGMMWPPHMPLGRGARPMPGMQGFNPV--MMG-DGLSYGPVGP 507

Query: 859  XXXXXXDLLNMXXXXXXXXXXXFSGDFQRPPFSGMMFHGR 740
                  DL  +           FSGDF  PP + MMF GR
Sbjct: 508  DGFGMPDLFGVGPRGFAPYGPRFSGDFGGPP-AAMMFRGR 546



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 10/75 (13%)
 Frame = -1

Query: 479 KRDQMALGGNDRYSGGGSQPMGQDI----GRPDDEAQPGAETTFKNGE------SESEDE 330
           KRDQ     NDR+  G  Q   QD+    G PDD+  P  +  +K  +      SESEDE
Sbjct: 608 KRDQRTADRNDRFGSGSEQGKSQDMLSQSGGPDDD--PQYQQGYKGNQDDHPDDSESEDE 665

Query: 329 APRRSRHGEGKKKRR 285
           APRRSRHGEGKKK +
Sbjct: 666 APRRSRHGEGKKKHK 680


>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 691

 Score =  371 bits (953), Expect = e-100
 Identities = 218/405 (53%), Positives = 236/405 (58%), Gaps = 5/405 (1%)
 Frame = -2

Query: 1939 VLQKIQQLTSYNYGNSNRFFQNRNANHSQQSEKFQFPQGNNDMNQ--VTKPTTTDXXXXX 1766
            VLQKIQ L SYNY +SN+FFQ R A+++QQ+EK Q PQG N  NQ    KP   +     
Sbjct: 160  VLQKIQHLFSYNYNSSNKFFQQRGASYNQQAEKPQLPQGTNSTNQGVTGKPLPAESGNAQ 219

Query: 1765 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKTSIPLPQGTSRYFIVKSCN 1586
                                                    +T+ PLPQG SRYFIVKSCN
Sbjct: 220  PQQQVQQSQQQVNQSQMQNVANGQPNQAN-----------RTATPLPQGISRYFIVKSCN 268

Query: 1585 RENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSKTGGSVG 1406
            RENLELSVQQGVWATQRSNE+KLNEAFDSVENVIL+FSVNRTRHFQGCAKMTS+ GGSV 
Sbjct: 269  RENLELSVQQGVWATQRSNESKLNEAFDSVENVILVFSVNRTRHFQGCAKMTSRIGGSVA 328

Query: 1405 GGNWKYEHGTAHYGRNFCVRWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGE 1226
            GGNWKY HGTAHYGRNF V+WLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGE
Sbjct: 329  GGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGE 388

Query: 1225 QLASLLYLEPDSELMAISLXXXXXXXXXXXKGVNPENASENPDIVPXXXXXXXXXXXXXX 1046
            QLASLLYLEPDSELMAIS+           KGVNP+N  ENPDIVP              
Sbjct: 389  QLASLLYLEPDSELMAISVAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDE 448

Query: 1045 XXXXXEQGFGLAAQXXXXXXGMIWXXXXXXXXXXXXXXXXXXXXXXMNMMGADGFSY--- 875
                   G G A Q      GM+W                        MMG DG SY   
Sbjct: 449  EEESFSHGVGPAGQGRGRGRGMMWPPHMPLGRGARPMPGMQGFNPV--MMG-DGLSYGPV 505

Query: 874  XXXXXXXXXXXDLLNMXXXXXXXXXXXFSGDFQRPPFSGMMFHGR 740
                       DL  +           FSGDF  PP + MMF GR
Sbjct: 506  GPVGPDGFGMPDLFGVGPRGFAPYGPRFSGDFGGPP-AAMMFRGR 549



 Score = 68.9 bits (167), Expect = 4e-09
 Identities = 39/80 (48%), Positives = 45/80 (56%), Gaps = 15/80 (18%)
 Frame = -1

Query: 479 KRDQMALGGNDRYSGGGSQPMGQDI----GRPDDEAQ-----------PGAETTFKNGES 345
           KRDQ     NDR+  G  Q   QD+    G PDD+AQ             A   F+N +S
Sbjct: 611 KRDQRTADRNDRFGSGSEQGKSQDMLSQSGGPDDDAQYQQGYKGNQDDHPAVNNFRNDDS 670

Query: 344 ESEDEAPRRSRHGEGKKKRR 285
           ESEDEAPRRSRHGEGKKK +
Sbjct: 671 ESEDEAPRRSRHGEGKKKHK 690


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