BLASTX nr result

ID: Atractylodes22_contig00006061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00006061
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   110   3e-22
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-22
emb|CBI27434.3| unnamed protein product [Vitis vinifera]              109   7e-22
ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   108   2e-21
ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   106   6e-21

>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score =  110 bits (276), Expect = 3e-22
 Identities = 85/286 (29%), Positives = 137/286 (47%), Gaps = 7/286 (2%)
 Frame = -3

Query: 838 EIDQWMLFLSRNSVRELVLTN-SNRHYQLPSYVFSCLELKGLNLAACIFKPPLEFERLLN 662
           +ID+W+L LSR+S++E +L     + Y++PS +FS   L  L L  C+ +PPL F+   +
Sbjct: 109 DIDRWILHLSRSSIKEFILEIWKGQRYKVPSSLFSFEHLIHLELFNCLLQPPLTFKGFRS 168

Query: 661 LEHLILRNVDFRANSCRTLA-TLPQLKKLHLHSCTNVYNLNIEARTLRKLTVXXXXXXXX 485
           L+ L L+++    N    L  + P L++L L +     +LNI A  L+   +        
Sbjct: 169 LKSLDLQHITLTQNVFENLIFSCPLLERLTLMNFDGFTHLNINAPNLQFFDIGGVYDDVT 228

Query: 484 XXXXXXXXLTMVFLSIHKREEAFVRVGRMKA--RFLSNSAKKEYFIIDGHFLKFLSAVEI 311
                   L  + L ++ + +  V  G      RF +N        +  +FLK+LS   +
Sbjct: 229 FENTFQLTLVSIGLYVNVQNDRNVGHGSSSKLLRFFANLPHIRRLEVQSYFLKYLSIGNV 288

Query: 310 PKCLPHA---VNLCLLKFQLADLDELRGALCLLRNSPNLESLFIMHAQEPQVIHNDVTPA 140
           P  LP     +N   ++    DL+E   ALCLLR+SPN++ L ++   E Q     +T  
Sbjct: 289 PSRLPKPCFDLNYLSIRINFNDLEENSAALCLLRSSPNVQELEMLARPEEQTSLGTIT-- 346

Query: 139 SNHLESPDCLDLTFNQLETVEIKSFGGSRPELLFIKLLLAHSPSLQ 2
             +    D  +  F QL  V I    G R EL F+  LL++SP L+
Sbjct: 347 --NFWEDDHWNNLFGQLRLVRIVGISGIRCELDFMNFLLSNSPVLE 390


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
            predicted protein [Populus trichocarpa]
          Length = 505

 Score =  110 bits (276), Expect = 3e-22
 Identities = 88/286 (30%), Positives = 133/286 (46%), Gaps = 7/286 (2%)
 Frame = -3

Query: 838  EIDQWMLFLSRNSVRELVLTN-SNRHYQLPSYVFSCLELKGLNLAACIFKPPLEFERLLN 662
            +ID+W+L LSR S +E VL     + Y+LPS +FS   L  L L  C+ KPPL F+   N
Sbjct: 188  DIDRWILHLSRGSTKEFVLEIWKGQQYKLPSCLFSFKNLVYLELFNCLLKPPLAFKGFRN 247

Query: 661  LEHLILRNVDFRANSC-RTLATLPQLKKLHLHSCTNVYNLNIEARTLRKLTVXXXXXXXX 485
            L++L L++V        + +++   L++L L +     +LNI A  L+   V        
Sbjct: 248  LKNLDLQHVTLAQEVFEKLISSCAMLERLTLINFDGFTHLNINAPNLQFFDVGGVFDDVS 307

Query: 484  XXXXXXXXLTMVFLSIHKREEAFVRVGRMK--ARFLSNSAKKEYFIIDGHFLKFLSAVEI 311
                    L  + L ++ + +  V  G      RF  N        I  +FLK+L+  ++
Sbjct: 308  FENTFVLALVSIGLYVNVKNDQNVSYGSSSKLLRFFVNLPHVRRLEIQSYFLKYLAIGKV 367

Query: 310  PKCLPHA---VNLCLLKFQLADLDELRGALCLLRNSPNLESLFIMHAQEPQVIHNDVTPA 140
            P  LP     +N   ++    D +E   A CLLR+ PNL+ + I+   E Q +   VT  
Sbjct: 368  PSKLPKPCIDLNYLSIRLNFNDYEENSAAFCLLRSCPNLQEIEILARPEEQAVVGPVT-- 425

Query: 139  SNHLESPDCLDLTFNQLETVEIKSFGGSRPELLFIKLLLAHSPSLQ 2
                   D     F QL  V+I    G R EL  IK LL++SP L+
Sbjct: 426  --DFWDDDHWKCLFGQLRLVKIVGISGIRSELDCIKFLLSNSPVLE 469


>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  109 bits (273), Expect = 7e-22
 Identities = 84/298 (28%), Positives = 143/298 (47%), Gaps = 16/298 (5%)
 Frame = -3

Query: 847 SFQEIDQWMLFLSRNSVRELVLTNSN-RHYQLPSYVFSCLELKGLNLAACIFKPPLEFER 671
           S+ +ID W+ FLS + ++E  L+ +   HY+LPSY F+ L L+ L L  C F+PP  F+ 
Sbjct: 133 SYSDIDHWINFLSNHDIQEFTLSRAKTEHYKLPSYFFTFLHLRHLKLRGCAFRPPPRFKG 192

Query: 670 LLNLEHLILRNVDFRANSCRTL-ATLPQLKKLHLHSCTNVYNLNIEARTLRKLTVXXXXX 494
              L  L L ++   A +  +L ++ P L++L +       +L I A  L+  +      
Sbjct: 193 FSKLISLQLEDILMDAETFGSLISSCPLLEQLTVSGYIPYDSLEISAPNLKSFSFTGDFG 252

Query: 493 XXXXXXXXXXXLTMVFL-----SIHKREEAFVRVGRMKARFLSNSAKKEYFIIDGHFLKF 329
                         V L     ++  +    +++GR       +    E   ++G+FL+F
Sbjct: 253 SICFKNTLLLAEVTVALCRVNKNVKHQSSNLIKIGR-------SLPAVEKLYLEGYFLEF 305

Query: 328 LSAVEIPKCLPHAVN----LCLLKFQLADLDELRGALCLLRNSPNLESLFIMH-----AQ 176
           L+   +PK LP   N    L L +   ++LDE+  +LCL+ +SPNLE L ++      A+
Sbjct: 306 LALGNVPKRLPILFNNLKVLHLDEMDFSNLDEILCSLCLITSSPNLEELRVVAYAGDIAR 365

Query: 175 EPQVIHNDVTPASNHLESPDCLDLTFNQLETVEIKSFGGSRPELLFIKLLLAHSPSLQ 2
           +  V +      S+H         +  +L+ V+++      PEL FIK +LA SPSL+
Sbjct: 366 DAVVEYFGTQNLSHH---------SLKRLQKVKMEEISNFEPELEFIKFILASSPSLE 414


>ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477724|gb|AES58927.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score =  108 bits (269), Expect = 2e-21
 Identities = 89/287 (31%), Positives = 137/287 (47%), Gaps = 9/287 (3%)
 Frame = -3

Query: 835 IDQWMLFLSRNSVRELVLTNSNRH-YQLPSYVFSCLELKGLNLAACIFKPPLEFERLLNL 659
           +D+W+  L++ S++ELVL  S R  Y++P  +FSC  L  L L  C+ KPP   E L NL
Sbjct: 106 LDRWIFHLTKRSIKELVLQISERKLYKIPWCLFSCQSLHHLTLYYCLLKPPSTIEGLKNL 165

Query: 658 EHLILRNVDFRANSCRTL-ATLPQLKKLHLHSCTNVYNLNIEARTLRKLTVXXXXXXXXX 482
           + L L +V     +   L ++ P L+ L L        +NI A  L+ L +         
Sbjct: 166 KSLDLDHVSMSQYAFENLISSCPLLENLTLTELDGFTQINIHAPNLKVLDICGKFEDISF 225

Query: 481 XXXXXXXLTMVFLSIHKREEA-FVRVGRMKARFLSNSAKKEY---FIIDGHFLKFLSAVE 314
                     V LS++   E+   R+    +  L+  A   +    +I+G+FLK+L+A  
Sbjct: 226 DNTFQLDYVFVDLSLYLNSESNQSRLHGSPSNLLNFFAHLHHIHGLVINGYFLKYLAAGA 285

Query: 313 IPKCLP-HAVNLCLLKFQL--ADLDELRGALCLLRNSPNLESLFIMHAQEPQVIHNDVTP 143
           +P  LP   +NL  L F +   D  E+  ALC+ R+SPNL+ L I    E + I   + P
Sbjct: 286 VPVKLPTPCINLTYLWFSINFYDFKEISTALCVFRSSPNLKELNIFAKHEKKTI--VLAP 343

Query: 142 ASNHLESPDCLDLTFNQLETVEIKSFGGSRPELLFIKLLLAHSPSLQ 2
           A    E          ++  V I+   G + EL F++ LL HSP L+
Sbjct: 344 AFFCWEDIFLEPSMLTRVRHVGIEGISGIKSELDFMRFLLLHSPVLE 390


>ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 416

 Score =  106 bits (265), Expect = 6e-21
 Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 7/286 (2%)
 Frame = -3

Query: 838 EIDQWMLFLSRNSVRELVLTN-SNRHYQLPSYVFSCLELKGLNLAACIFKPPLEFERLLN 662
           +ID+W+L+LSR  +RE +L     +HY+LPS +++C  L  L L   + KPP  F+  ++
Sbjct: 99  DIDRWILYLSRTPIREFILEIWKGQHYKLPSCLYNCQSLIHLELFNSLLKPPPTFKGFMS 158

Query: 661 LEHLILRNVDFRANSCRTL-ATLPQLKKLHLHSCTNVYNLNIEARTLRKLTVXXXXXXXX 485
           L+ L L+++    ++   L ++ P L+K  L +     +LNI A  L+            
Sbjct: 159 LKSLDLQHIIMAQDAFENLISSCPLLEKFTLMNFDGFTHLNIHAPNLQFFDTGGVFYDVN 218

Query: 484 XXXXXXXXLTMVFLSIHKREEAFVRVG--RMKARFLSNSAKKEYFIIDGHFLKFLSAVEI 311
                      + L +    +  +  G  R   +F ++  + +   I  +FLK+L+A  +
Sbjct: 219 FKNTFLLATVSIGLYVDITNDKNLADGNSRNLVKFFAHLPRIQRLEIQSYFLKYLAAGNV 278

Query: 310 PKCLP-HAVNLCLLKFQL--ADLDELRGALCLLRNSPNLESLFIMHAQEPQVIHNDVTPA 140
           P  LP   ++L  L  ++  + ++E   ALCLLR+SPNL+ L ++   E Q +       
Sbjct: 279 PGKLPAPCIDLTHLSIRINFSSVEENLTALCLLRSSPNLQELEMLARPEEQTL----LET 334

Query: 139 SNHLESPDCLDLTFNQLETVEIKSFGGSRPELLFIKLLLAHSPSLQ 2
           S  L   +  + +F  L  V++    G  P+L FI  LLA+SP L+
Sbjct: 335 STTLWKKEHWNYSFAHLRVVKLTGISGVGPQLDFINFLLAYSPVLE 380


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