BLASTX nr result

ID: Atractylodes22_contig00005994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005994
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...   119   9e-25
gb|ABC94893.1| polyprotein [Oryza australiensis]                      115   2e-23
ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] g...   114   5e-23
prf||1510387A retrotransposon del1-46                                 113   8e-23
gb|ABA93560.1| retrotransposon protein, putative, Ty3-gypsy subc...   112   1e-22

>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
           gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
           kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
           Group] gi|31431495|gb|AAP53268.1| retrotransposon
           protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1230

 Score =  119 bits (299), Expect = 9e-25
 Identities = 61/181 (33%), Positives = 102/181 (56%)
 Frame = +3

Query: 366 FLSCKPPTFLGDYDPCKAMGWIREIEEVFETSKCVAEDRVIFATSVLKAEALFWWDMVVG 545
           F   KPPTF G  +P +A  WI  +E+ FE   C  ++++I+AT +L++ A  WWD    
Sbjct: 74  FQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWD--AH 131

Query: 546 VRGSSTAARMTWDEFKKIFQDKFCPKSAVKQLDEEFLKLKQGSMTMQEYTSKFMERSRFA 725
            +  S    +TW+ FK+ F  K+ P+S  +  ++EFL+LKQG+ ++ EY  +F   +RFA
Sbjct: 132 KKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAEYEIEFSRLARFA 191

Query: 726 GYYVATEELRVERYIWGLKTPIRELVTIWNPTTFQSAVDAALIMERDRKRQDAERGADKR 905
             +V T+  +  R+  GL+ P++  V  +  T F+  V  A ++E+    Q  E G  ++
Sbjct: 192 PEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKAQLLEKGYHEQRIEHGQPQK 251

Query: 906 K 908
           K
Sbjct: 252 K 252


>gb|ABC94893.1| polyprotein [Oryza australiensis]
          Length = 1469

 Score =  115 bits (288), Expect = 2e-23
 Identities = 61/181 (33%), Positives = 100/181 (55%)
 Frame = +3

Query: 348 GCTYKTFLSCKPPTFLGDYDPCKAMGWIREIEEVFETSKCVAEDRVIFATSVLKAEALFW 527
           G +   F+  KPPTF    +P  A  W+R IE+     +    DRV+FAT+ L+  A  W
Sbjct: 45  GSSLGEFMRAKPPTFSTAEEPMDAEDWLRVIEKKLTLVRVREADRVVFATNQLEGPASDW 104

Query: 528 WDMVVGVRGSSTAARMTWDEFKKIFQDKFCPKSAVKQLDEEFLKLKQGSMTMQEYTSKFM 707
           WD     R    A   TW+EF   F++ F P + ++    EF +L+QG+ ++QEY +KF 
Sbjct: 105 WDTYKETRAED-AGEPTWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTSVQEYLNKFT 163

Query: 708 ERSRFAGYYVATEELRVERYIWGLKTPIRELVTIWNPTTFQSAVDAALIMERDRKRQDAE 887
           + +R+A   +A EE +++++I GL   +R  +   + T+FQS ++  + +E D+K  D  
Sbjct: 164 QLARYATSDLADEEEKIDKFIEGLNDELRGPMIGQDHTSFQSLINKVVRLEHDQKVVDNN 223

Query: 888 R 890
           R
Sbjct: 224 R 224


>ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group]
           gi|255679330|dbj|BAH94833.1| Os10g0357350 [Oryza sativa
           Japonica Group]
          Length = 443

 Score =  114 bits (284), Expect = 5e-23
 Identities = 57/166 (34%), Positives = 96/166 (57%)
 Frame = +3

Query: 366 FLSCKPPTFLGDYDPCKAMGWIREIEEVFETSKCVAEDRVIFATSVLKAEALFWWDMVVG 545
           F   KPPTF G  +P +A  WI  +E+ FE   C  ++++I+AT +L++ A  WWD    
Sbjct: 162 FQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWD--AH 219

Query: 546 VRGSSTAARMTWDEFKKIFQDKFCPKSAVKQLDEEFLKLKQGSMTMQEYTSKFMERSRFA 725
            +  S    +TW+ FK+ F  K+ P+S  +  ++EFL+LKQG+ ++ EY  +F   +RFA
Sbjct: 220 KKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAEYEIEFSRLARFA 279

Query: 726 GYYVATEELRVERYIWGLKTPIRELVTIWNPTTFQSAVDAALIMER 863
             +V T+  +  R+  GL+ P++  V  +  T F+  V  A ++E+
Sbjct: 280 PEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKAQLLEK 325


>prf||1510387A retrotransposon del1-46
          Length = 1443

 Score =  113 bits (282), Expect = 8e-23
 Identities = 66/183 (36%), Positives = 103/183 (56%)
 Frame = +3

Query: 360 KTFLSCKPPTFLGDYDPCKAMGWIREIEEVFETSKCVAEDRVIFATSVLKAEALFWWDMV 539
           K F    PP F GD DP +A  WIR + ++ +T     E +VI A+  L+ EA FWWD  
Sbjct: 58  KEFKGLNPPIFKGDPDPLEAHRWIRHVTKILDTLGVTDEQKVILASFQLQGEAEFWWDAK 117

Query: 540 VGVRGSSTAARMTWDEFKKIFQDKFCPKSAVKQLDEEFLKLKQGSMTMQEYTSKFMERSR 719
           V  R   T  ++ WDEF ++F +KF P +    L E F+ L QGS+T+ +Y +KF E SR
Sbjct: 118 VRSREDDT-TQIKWDEFVEVFTEKFFPDTVRDDL-ERFMTLVQGSLTVAQYEAKFEELSR 175

Query: 720 FAGYYVATEELRVERYIWGLKTPIRELVTIWNPTTFQSAVDAALIMERDRKRQDAERGAD 899
           +A Y V     +V+R+  GLK  I + ++      ++  +  AL +E+ R++++A+  A 
Sbjct: 176 YAPYQVDINIRKVKRFEQGLKLSITKQLSSHLIKDYREVITRALSVEK-REQREAQIMAK 234

Query: 900 KRK 908
           + K
Sbjct: 235 RSK 237


>gb|ABA93560.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1469

 Score =  112 bits (280), Expect = 1e-22
 Identities = 59/175 (33%), Positives = 97/175 (55%)
 Frame = +3

Query: 348 GCTYKTFLSCKPPTFLGDYDPCKAMGWIREIEEVFETSKCVAEDRVIFATSVLKAEALFW 527
           G ++  F+  KPPTF    +P  A  W+R IE+     +    D+VIFA + L+  A  W
Sbjct: 45  GSSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVPEADKVIFAANQLEGPAGDW 104

Query: 528 WDMVVGVRGSSTAARMTWDEFKKIFQDKFCPKSAVKQLDEEFLKLKQGSMTMQEYTSKFM 707
           WDM    R    A    W+EF   F+D F P + ++    EF +L+QG+ T+QEY ++F 
Sbjct: 105 WDMYKEAR-EEDAGEPNWEEFTIAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFT 163

Query: 708 ERSRFAGYYVATEELRVERYIWGLKTPIRELVTIWNPTTFQSAVDAALIMERDRK 872
           + +R+A   +A EE +++++I GL   +R  +   +  +FQS ++  + +E DRK
Sbjct: 164 QLARYATRDLADEEEKIDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRK 218


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