BLASTX nr result
ID: Atractylodes22_contig00005959
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00005959 (386 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_178116.5| coatomer subunit beta'-1 [Arabidopsis thaliana]... 72 5e-11 ref|XP_002304183.1| predicted protein [Populus trichocarpa] gi|2... 70 1e-10 ref|NP_001154478.1| coatomer subunit beta'-1 [Arabidopsis thalia... 70 2e-10 ref|NP_001154480.1| coatomer subunit beta'-1 [Arabidopsis thalia... 70 2e-10 ref|NP_175645.1| coatomer subunit beta'-2 [Arabidopsis thaliana]... 69 3e-10 >ref|NP_178116.5| coatomer subunit beta'-1 [Arabidopsis thaliana] gi|332198218|gb|AEE36339.1| coatomer subunit beta'-1 [Arabidopsis thaliana] Length = 1135 Score = 72.0 bits (175), Expect = 5e-11 Identities = 31/67 (46%), Positives = 47/67 (70%) Frame = +1 Query: 181 VKELQIALQYQIPPVKIKFQSTFSLKSRMVHAVDLHPTEPWVLLGLFCGVVCIWNYRTQV 360 V+ IAL++ P++++ + F+ +S V +VDLHPTEPW+L L+ G +CIWNY+TQ Sbjct: 206 VRVFLIALKFD--PLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQT 263 Query: 361 MEKSFGI 381 M KSF + Sbjct: 264 MVKSFDV 270 >ref|XP_002304183.1| predicted protein [Populus trichocarpa] gi|222841615|gb|EEE79162.1| predicted protein [Populus trichocarpa] Length = 452 Score = 70.5 bits (171), Expect = 1e-10 Identities = 26/62 (41%), Positives = 44/62 (70%) Frame = +1 Query: 196 IALQYQIPPVKIKFQSTFSLKSRMVHAVDLHPTEPWVLLGLFCGVVCIWNYRTQVMEKSF 375 + ++ + P++++ + + +S V +VDLHPTEPW+L+ L+ G VCIWNY++Q M KSF Sbjct: 26 LVTKWSVQPLRLEIKRKLAQRSERVKSVDLHPTEPWILVSLYSGTVCIWNYQSQTMAKSF 85 Query: 376 GI 381 + Sbjct: 86 EV 87 >ref|NP_001154478.1| coatomer subunit beta'-1 [Arabidopsis thaliana] gi|146286086|sp|Q9CAA0.2|COB21_ARATH RecName: Full=Coatomer subunit beta'-1; AltName: Full=Beta'-coat protein 1; Short=Beta'-COP 1 gi|5902363|gb|AAD55465.1|AC009322_5 Putative coatomer protein complex, subunit beta 2 (beta prime) [Arabidopsis thaliana] gi|20259354|gb|AAM14001.1| putative coatomer protein complex, subunit beta 2 (beta prime) [Arabidopsis thaliana] gi|332198217|gb|AEE36338.1| coatomer subunit beta'-1 [Arabidopsis thaliana] Length = 920 Score = 70.1 bits (170), Expect = 2e-10 Identities = 27/54 (50%), Positives = 40/54 (74%) Frame = +1 Query: 220 PVKIKFQSTFSLKSRMVHAVDLHPTEPWVLLGLFCGVVCIWNYRTQVMEKSFGI 381 P++++ + F+ +S V +VDLHPTEPW+L L+ G +CIWNY+TQ M KSF + Sbjct: 2 PLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDV 55 >ref|NP_001154480.1| coatomer subunit beta'-1 [Arabidopsis thaliana] gi|332198220|gb|AEE36341.1| coatomer subunit beta'-1 [Arabidopsis thaliana] Length = 912 Score = 70.1 bits (170), Expect = 2e-10 Identities = 27/54 (50%), Positives = 40/54 (74%) Frame = +1 Query: 220 PVKIKFQSTFSLKSRMVHAVDLHPTEPWVLLGLFCGVVCIWNYRTQVMEKSFGI 381 P++++ + F+ +S V +VDLHPTEPW+L L+ G +CIWNY+TQ M KSF + Sbjct: 2 PLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDV 55 >ref|NP_175645.1| coatomer subunit beta'-2 [Arabidopsis thaliana] gi|75169434|sp|Q9C827.1|COB22_ARATH RecName: Full=Coatomer subunit beta'-2; AltName: Full=Beta'-coat protein 2; Short=Beta'-COP 2 gi|12323125|gb|AAG51545.1|AC037424_10 coatomer complex subunit, putative; 33791-27676 [Arabidopsis thaliana] gi|332194671|gb|AEE32792.1| coatomer subunit beta'-2 [Arabidopsis thaliana] Length = 926 Score = 69.3 bits (168), Expect = 3e-10 Identities = 27/54 (50%), Positives = 40/54 (74%) Frame = +1 Query: 220 PVKIKFQSTFSLKSRMVHAVDLHPTEPWVLLGLFCGVVCIWNYRTQVMEKSFGI 381 P++++ + + +S V +VDLHPTEPW+L L+ G +CIWNY+TQVM KSF + Sbjct: 2 PLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEV 55