BLASTX nr result

ID: Atractylodes22_contig00005924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005924
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277631.1| PREDICTED: U5 small nuclear ribonucleoprotei...   632   e-179
ref|XP_002524865.1| WD-repeat protein, putative [Ricinus communi...   627   e-177
ref|XP_003554035.1| PREDICTED: U5 small nuclear ribonucleoprotei...   627   e-177
ref|NP_001239810.1| uncharacterized protein LOC100789793 [Glycin...   626   e-177
ref|XP_002326058.1| predicted protein [Populus trichocarpa] gi|2...   618   e-174

>ref|XP_002277631.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
            [Vitis vinifera]
          Length = 344

 Score =  632 bits (1631), Expect = e-179
 Identities = 305/340 (89%), Positives = 322/340 (94%), Gaps = 1/340 (0%)
 Frame = -2

Query: 1262 EGALSVMGSRP-MELSAIPYSGHQNMNTGPNGKQRTSSLLSPIMLLTGHQSAVYTMKFNP 1086
            E ALSV+G RP MELSA+P +G +    G NGKQRTSSL SPIMLL GHQSA+YTMKFNP
Sbjct: 7    ENALSVVGPRPGMELSAVPCTGPRA--PGANGKQRTSSLESPIMLLAGHQSAIYTMKFNP 64

Query: 1085 AGTVIASGSHDREIFLWHVTGECKNFMVLKGHKNAVLDLQWTTDGSQIISASPDKTLRAW 906
             GTVIASGSH+REIFLW+V G+CKNFMVLKGHKNA+LDLQWTTDG+QIISASPDKTLRAW
Sbjct: 65   TGTVIASGSHEREIFLWYVHGDCKNFMVLKGHKNAILDLQWTTDGTQIISASPDKTLRAW 124

Query: 905  DVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTFPDKYQI 726
            DVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWD+RQRGAIQTFPDKYQI
Sbjct: 125  DVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQI 184

Query: 725  TAVGFSDASDKIYTGGIDNDVKVWDLRRNEVTMTLQGHQNMITGMQLSPDGSYLLTNGMD 546
            TAV FSDASDKI+TGGIDNDVKVWDLRRNEVTMTLQGHQ+MITGMQLSPDGSYLLTNGMD
Sbjct: 185  TAVSFSDASDKIFTGGIDNDVKVWDLRRNEVTMTLQGHQDMITGMQLSPDGSYLLTNGMD 244

Query: 545  CTLRIWDMRPYAPQNRCVKIMEGHQHNVEQNLLKCSWSPDGSKVTAGSSDRMVYIWDTTS 366
            C L IWDMRPYAPQNRCVKI+EGHQHN E+NLLKCSWSPDGSKVTAGSSDRMVYIWDTTS
Sbjct: 245  CKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTS 304

Query: 365  RRILYKLPGHTGSVNECVFHPTEPIIGSCSSDKQIYLGEI 246
            RRILYKLPGHTGSVNECVFHP+EPI+GSCSSDKQIYLGEI
Sbjct: 305  RRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344


>ref|XP_002524865.1| WD-repeat protein, putative [Ricinus communis]
            gi|223535828|gb|EEF37489.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 345

 Score =  627 bits (1618), Expect = e-177
 Identities = 300/346 (86%), Positives = 322/346 (93%)
 Frame = -2

Query: 1283 QVRMQAGEGALSVMGSRPMELSAIPYSGHQNMNTGPNGKQRTSSLLSPIMLLTGHQSAVY 1104
            QV  + G+ ALSV GSRPME S +PY+G Q    GP+GKQRTSSL S IMLLTGHQSAVY
Sbjct: 2    QVAPREGDNALSVPGSRPMEWSTVPYTGLQG--PGPSGKQRTSSLESTIMLLTGHQSAVY 59

Query: 1103 TMKFNPAGTVIASGSHDREIFLWHVTGECKNFMVLKGHKNAVLDLQWTTDGSQIISASPD 924
            TMKFNPAG +IASGSHD++IFLW+V GECKNFMVLKGHKNAVLDL WTTDGSQIISASPD
Sbjct: 60   TMKFNPAGNLIASGSHDKDIFLWYVHGECKNFMVLKGHKNAVLDLHWTTDGSQIISASPD 119

Query: 923  KTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTF 744
            KT+RAWD+ETGKQIKKMAEHSSFVNSCCP+RRGPPLVVSGSDDGTAKLWD+RQRGAIQTF
Sbjct: 120  KTVRAWDIETGKQIKKMAEHSSFVNSCCPTRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF 179

Query: 743  PDKYQITAVGFSDASDKIYTGGIDNDVKVWDLRRNEVTMTLQGHQNMITGMQLSPDGSYL 564
            PDKYQITAV FSDASDKI+TGGIDN+VKVWDLR+ EVTM L+GHQ+MITGMQLSPDGSYL
Sbjct: 180  PDKYQITAVSFSDASDKIFTGGIDNEVKVWDLRKGEVTMKLEGHQDMITGMQLSPDGSYL 239

Query: 563  LTNGMDCTLRIWDMRPYAPQNRCVKIMEGHQHNVEQNLLKCSWSPDGSKVTAGSSDRMVY 384
            LTNGMDC L IWDMRPYAPQNRCVKI+EGHQHN E+NLLKC+WSPDG+KVTAGSSDRMVY
Sbjct: 240  LTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCNWSPDGTKVTAGSSDRMVY 299

Query: 383  IWDTTSRRILYKLPGHTGSVNECVFHPTEPIIGSCSSDKQIYLGEI 246
            IWDTTSRRILYKLPGHTGSVNECVFHP EPIIGSCSSDKQIYLGEI
Sbjct: 300  IWDTTSRRILYKLPGHTGSVNECVFHPHEPIIGSCSSDKQIYLGEI 345


>ref|XP_003554035.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
            isoform 1 [Glycine max] gi|356571750|ref|XP_003554036.1|
            PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa
            protein-like isoform 2 [Glycine max]
            gi|356571752|ref|XP_003554037.1| PREDICTED: U5 small
            nuclear ribonucleoprotein 40 kDa protein-like isoform 3
            [Glycine max]
          Length = 345

 Score =  627 bits (1616), Expect = e-177
 Identities = 297/346 (85%), Positives = 319/346 (92%)
 Frame = -2

Query: 1283 QVRMQAGEGALSVMGSRPMELSAIPYSGHQNMNTGPNGKQRTSSLLSPIMLLTGHQSAVY 1104
            QV    GE ALSV+G RPME S +PY+  Q    GPNGKQRTSSL SPIMLL+GHQSA+Y
Sbjct: 2    QVFPSEGESALSVVGPRPMEWSTVPYNAPQA--PGPNGKQRTSSLESPIMLLSGHQSAIY 59

Query: 1103 TMKFNPAGTVIASGSHDREIFLWHVTGECKNFMVLKGHKNAVLDLQWTTDGSQIISASPD 924
            TMKFNPAG+V+ASGSHDREIFLW+V G+CKNFMVLKGHKNAVLDL WTTDG+QI+SASPD
Sbjct: 60   TMKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPD 119

Query: 923  KTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTF 744
            KT+RAWDVETGKQIKKM EH S+VNSCCPSRRGPPLVVSGSDDGTAKLWD+RQRG+IQTF
Sbjct: 120  KTVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTF 179

Query: 743  PDKYQITAVGFSDASDKIYTGGIDNDVKVWDLRRNEVTMTLQGHQNMITGMQLSPDGSYL 564
            PDKYQITAVGFSDASDKI+TGGIDNDVK+WDLR+ EVTMTLQGHQ+MIT MQLSPDGSYL
Sbjct: 180  PDKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITAMQLSPDGSYL 239

Query: 563  LTNGMDCTLRIWDMRPYAPQNRCVKIMEGHQHNVEQNLLKCSWSPDGSKVTAGSSDRMVY 384
            LTNGMDC L IWDMRPYAPQNRCVK++EGHQHN E+NLLKC WSPDGSKVTAGSSDRMVY
Sbjct: 240  LTNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVY 299

Query: 383  IWDTTSRRILYKLPGHTGSVNECVFHPTEPIIGSCSSDKQIYLGEI 246
            IWDTTSRRILYKLPGH GSVNECVFHP EPIIGSCSSDKQIYLGEI
Sbjct: 300  IWDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345


>ref|NP_001239810.1| uncharacterized protein LOC100789793 [Glycine max]
            gi|255645285|gb|ACU23139.1| unknown [Glycine max]
          Length = 345

 Score =  626 bits (1614), Expect = e-177
 Identities = 298/346 (86%), Positives = 319/346 (92%)
 Frame = -2

Query: 1283 QVRMQAGEGALSVMGSRPMELSAIPYSGHQNMNTGPNGKQRTSSLLSPIMLLTGHQSAVY 1104
            QV    GE ALSV+G RPME S +PY+  Q    GPNGKQRTSSL SPIMLL+GHQSA+Y
Sbjct: 2    QVFSIEGESALSVVGPRPMEWSTVPYNAPQA--PGPNGKQRTSSLESPIMLLSGHQSAIY 59

Query: 1103 TMKFNPAGTVIASGSHDREIFLWHVTGECKNFMVLKGHKNAVLDLQWTTDGSQIISASPD 924
            TMKFNPAG+VIASGSHDREIFLW+V G+CKNFMVLKGHKNAVLDL WTTDG+QI+SASPD
Sbjct: 60   TMKFNPAGSVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPD 119

Query: 923  KTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTF 744
            KT+RAWDVETGKQIKKM EH S+VNSCCPSRRGPPLVVSGSDDGTAKLWD+RQRG+IQTF
Sbjct: 120  KTVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTF 179

Query: 743  PDKYQITAVGFSDASDKIYTGGIDNDVKVWDLRRNEVTMTLQGHQNMITGMQLSPDGSYL 564
            PDKYQITAVGFSDASDKI+TGGIDNDVK+WDLR+ EVTMTLQGHQ+MIT MQLSPDGSYL
Sbjct: 180  PDKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITDMQLSPDGSYL 239

Query: 563  LTNGMDCTLRIWDMRPYAPQNRCVKIMEGHQHNVEQNLLKCSWSPDGSKVTAGSSDRMVY 384
            LTNGMDC L IWDMRPYAPQNRCVK++EGHQHN E+NLLKC WSPDGSKVTAGSSDRMVY
Sbjct: 240  LTNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVY 299

Query: 383  IWDTTSRRILYKLPGHTGSVNECVFHPTEPIIGSCSSDKQIYLGEI 246
            IWDTTSRRILYKLPGH GSVNECVFHP EPIIGSCSSDKQIYLGEI
Sbjct: 300  IWDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345


>ref|XP_002326058.1| predicted protein [Populus trichocarpa] gi|222862933|gb|EEF00440.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  618 bits (1594), Expect = e-174
 Identities = 297/346 (85%), Positives = 316/346 (91%)
 Frame = -2

Query: 1283 QVRMQAGEGALSVMGSRPMELSAIPYSGHQNMNTGPNGKQRTSSLLSPIMLLTGHQSAVY 1104
            QV  +  E ALSV G RPME S +PY+G Q    G NGKQR SSL SPIMLLTGHQSA+Y
Sbjct: 2    QVVPRESESALSVSGPRPMEWSTVPYTGSQG--PGHNGKQRRSSLESPIMLLTGHQSAIY 59

Query: 1103 TMKFNPAGTVIASGSHDREIFLWHVTGECKNFMVLKGHKNAVLDLQWTTDGSQIISASPD 924
            TMKFNPAG VIASGSHD+EIFLW++ GECKNFMV++GHKNAVLDL WT DGSQIISASPD
Sbjct: 60   TMKFNPAGNVIASGSHDKEIFLWYMHGECKNFMVMRGHKNAVLDLHWTADGSQIISASPD 119

Query: 923  KTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTF 744
            KT+RAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGT+KLWDLRQ+GAIQTF
Sbjct: 120  KTVRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSKLWDLRQKGAIQTF 179

Query: 743  PDKYQITAVGFSDASDKIYTGGIDNDVKVWDLRRNEVTMTLQGHQNMITGMQLSPDGSYL 564
            PDKYQITAV FSDASDKI+TGGIDNDVKVWD+R+ EVTMTL+GHQ+MIT MQLSPDGSYL
Sbjct: 180  PDKYQITAVSFSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYL 239

Query: 563  LTNGMDCTLRIWDMRPYAPQNRCVKIMEGHQHNVEQNLLKCSWSPDGSKVTAGSSDRMVY 384
            LTNGMD  L IWDMRPYAPQNRCVKI EGHQHN E+NLLKCSWSPDGSKVTAGS+DRMVY
Sbjct: 240  LTNGMDNKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSADRMVY 299

Query: 383  IWDTTSRRILYKLPGHTGSVNECVFHPTEPIIGSCSSDKQIYLGEI 246
            IWDTTSRRILYKLPGH GSVNECVFHPTEPIIGSCSSDKQIYLGEI
Sbjct: 300  IWDTTSRRILYKLPGHAGSVNECVFHPTEPIIGSCSSDKQIYLGEI 345


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