BLASTX nr result

ID: Atractylodes22_contig00005815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005815
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...    60   1e-20
ref|XP_002533124.1| polypyrimidine tract binding protein, putati...    60   2e-20
ref|XP_003534439.1| PREDICTED: polypyrimidine tract-binding prot...    58   7e-20
ref|XP_003552536.1| PREDICTED: polypyrimidine tract-binding prot...    58   7e-20
ref|XP_003534438.1| PREDICTED: polypyrimidine tract-binding prot...    58   7e-20

>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
           [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
           protein product [Vitis vinifera]
          Length = 449

 Score = 60.1 bits (144), Expect(3) = 1e-20
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = -1

Query: 683 QVLGFQRSSLLHSFFAPSSEPAQVRGKSVYIQYSNRHEIVNNK 555
           + L   ++  + S++A SSEPAQVRGK+VYIQYSNRHEIVNNK
Sbjct: 60  EFLDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNK 102



 Score = 55.8 bits (133), Expect(3) = 1e-20
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -3

Query: 552 PRDVPGNILLVTIEGAEAGEVSIDVIHLIF 463
           P DVPGN+LLVTIEG EAG+VSIDVIHL+F
Sbjct: 104 PGDVPGNVLLVTIEGVEAGDVSIDVIHLVF 133



 Score = 30.4 bits (67), Expect(3) = 1e-20
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = -2

Query: 466 FRFVPKIATFEKDAGFQVYV 407
           F FV KIATFEK AGFQ  +
Sbjct: 136 FGFVHKIATFEKAAGFQALI 155


>ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223527087|gb|EEF29269.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 59.7 bits (143), Expect(3) = 2e-20
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -1

Query: 647 SFFAPSSEPAQVRGKSVYIQYSNRHEIVNNK 555
           S++A SSEPAQVRGK+VYIQYSNRHEIVNNK
Sbjct: 72  SYYASSSEPAQVRGKTVYIQYSNRHEIVNNK 102



 Score = 55.8 bits (133), Expect(3) = 2e-20
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -3

Query: 552 PRDVPGNILLVTIEGAEAGEVSIDVIHLIF 463
           P DVPGN+LLVTIEG EAG+VSIDVIHL+F
Sbjct: 104 PGDVPGNVLLVTIEGVEAGDVSIDVIHLVF 133



 Score = 30.4 bits (67), Expect(3) = 2e-20
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = -2

Query: 466 FRFVPKIATFEKDAGFQVYV 407
           F FV KIATFEK AGFQ  +
Sbjct: 136 FGFVHKIATFEKAAGFQALI 155


>ref|XP_003534439.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
           isoform 2 [Glycine max]
          Length = 505

 Score = 57.8 bits (138), Expect(3) = 7e-20
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -1

Query: 647 SFFAPSSEPAQVRGKSVYIQYSNRHEIVNNK 555
           S++A SSEPA VRGK+VYIQYSNRHEIVNNK
Sbjct: 72  SYYASSSEPAMVRGKTVYIQYSNRHEIVNNK 102



 Score = 55.5 bits (132), Expect(3) = 7e-20
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -3

Query: 552 PRDVPGNILLVTIEGAEAGEVSIDVIHLIF 463
           P D+PGN+LLVTIEG EAG+VSIDVIHL+F
Sbjct: 104 PGDIPGNVLLVTIEGVEAGDVSIDVIHLVF 133



 Score = 30.8 bits (68), Expect(3) = 7e-20
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = -2

Query: 466 FRFVPKIATFEKDAGFQVYV 407
           F FV KIATFEK AGFQ  +
Sbjct: 136 FGFVHKIATFEKTAGFQALI 155


>ref|XP_003552536.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
           isoform 1 [Glycine max]
          Length = 496

 Score = 57.8 bits (138), Expect(3) = 7e-20
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -1

Query: 647 SFFAPSSEPAQVRGKSVYIQYSNRHEIVNNK 555
           S++A SSEPA VRGK+VYIQYSNRHEIVNNK
Sbjct: 72  SYYASSSEPAMVRGKTVYIQYSNRHEIVNNK 102



 Score = 55.5 bits (132), Expect(3) = 7e-20
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -3

Query: 552 PRDVPGNILLVTIEGAEAGEVSIDVIHLIF 463
           P D+PGN+LLVTIEG EAG+VSIDVIHL+F
Sbjct: 104 PGDIPGNVLLVTIEGVEAGDVSIDVIHLVF 133



 Score = 30.8 bits (68), Expect(3) = 7e-20
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = -2

Query: 466 FRFVPKIATFEKDAGFQVYV 407
           F FV KIATFEK AGFQ  +
Sbjct: 136 FGFVHKIATFEKTAGFQALI 155


>ref|XP_003534438.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
           isoform 1 [Glycine max]
          Length = 496

 Score = 57.8 bits (138), Expect(3) = 7e-20
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -1

Query: 647 SFFAPSSEPAQVRGKSVYIQYSNRHEIVNNK 555
           S++A SSEPA VRGK+VYIQYSNRHEIVNNK
Sbjct: 72  SYYASSSEPAMVRGKTVYIQYSNRHEIVNNK 102



 Score = 55.5 bits (132), Expect(3) = 7e-20
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -3

Query: 552 PRDVPGNILLVTIEGAEAGEVSIDVIHLIF 463
           P D+PGN+LLVTIEG EAG+VSIDVIHL+F
Sbjct: 104 PGDIPGNVLLVTIEGVEAGDVSIDVIHLVF 133



 Score = 30.8 bits (68), Expect(3) = 7e-20
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = -2

Query: 466 FRFVPKIATFEKDAGFQVYV 407
           F FV KIATFEK AGFQ  +
Sbjct: 136 FGFVHKIATFEKTAGFQALI 155


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