BLASTX nr result

ID: Atractylodes22_contig00005688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005688
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273533.1| PREDICTED: mitochondral 37S ribosomal protei...   112   4e-23
gb|ABK21823.1| unknown [Picea sitchensis] gi|116790489|gb|ABK256...   110   9e-23
ref|XP_004161956.1| PREDICTED: mitochondral 37S ribosomal protei...   109   3e-22
ref|XP_004154171.1| PREDICTED: mitochondral 37S ribosomal protei...   109   3e-22
ref|XP_004145134.1| PREDICTED: mitochondral 37S ribosomal protei...   109   3e-22

>ref|XP_002273533.1| PREDICTED: mitochondral 37S ribosomal protein S27 [Vitis vinifera]
           gi|297738035|emb|CBI27236.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/70 (81%), Positives = 62/70 (88%), Gaps = 1/70 (1%)
 Frame = +1

Query: 7   AAVRG-VTEARAKIFGHVLNPTGQRSAHKILRKKFIGEKVASWYPKDILKEDPLVVARKE 183
           AAV+G VTEARA+IFGHVLNPTGQRS HKILRKK IGEKVA WYP DI K+DPLV+AR+E
Sbjct: 12  AAVKGGVTEARARIFGHVLNPTGQRSPHKILRKKLIGEKVAQWYPYDIKKDDPLVMARQE 71

Query: 184 HVRLSKLEML 213
             RLSKLEML
Sbjct: 72  QERLSKLEML 81


>gb|ABK21823.1| unknown [Picea sitchensis] gi|116790489|gb|ABK25632.1| unknown
           [Picea sitchensis]
          Length = 99

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/70 (72%), Positives = 61/70 (87%)
 Frame = +1

Query: 4   QAAVRGVTEARAKIFGHVLNPTGQRSAHKILRKKFIGEKVASWYPKDILKEDPLVVARKE 183
           +AA++GVTEARA+IFGHVLNPTGQRS HKILRKK IGE+VA WYP DI K+DP+++AR E
Sbjct: 9   EAALKGVTEARARIFGHVLNPTGQRSPHKILRKKLIGEQVAQWYPDDICKDDPMLIARSE 68

Query: 184 HVRLSKLEML 213
             RL KL+ML
Sbjct: 69  KERLEKLQML 78


>ref|XP_004161956.1| PREDICTED: mitochondral 37S ribosomal protein S27-like [Cucumis
           sativus]
          Length = 141

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/71 (73%), Positives = 60/71 (84%)
 Frame = +1

Query: 1   AQAAVRGVTEARAKIFGHVLNPTGQRSAHKILRKKFIGEKVASWYPKDILKEDPLVVARK 180
           A A  +GVTEARA+IFGH+LNPTGQRS HK+LRKK IG+KV+ WYP DI K+DPLV+AR 
Sbjct: 50  AAAVNKGVTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVSQWYPYDIKKDDPLVMARL 109

Query: 181 EHVRLSKLEML 213
           E  RLSKLEML
Sbjct: 110 EQERLSKLEML 120


>ref|XP_004154171.1| PREDICTED: mitochondral 37S ribosomal protein S27-like [Cucumis
           sativus]
          Length = 94

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/71 (73%), Positives = 60/71 (84%)
 Frame = +1

Query: 1   AQAAVRGVTEARAKIFGHVLNPTGQRSAHKILRKKFIGEKVASWYPKDILKEDPLVVARK 180
           A A  +GVTEARA+IFGH+LNPTGQRS HK+LRKK IG+KV+ WYP DI K+DPLV+AR 
Sbjct: 3   AAAVNKGVTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVSQWYPYDIKKDDPLVMARL 62

Query: 181 EHVRLSKLEML 213
           E  RLSKLEML
Sbjct: 63  EQERLSKLEML 73


>ref|XP_004145134.1| PREDICTED: mitochondral 37S ribosomal protein S27-like isoform 1
           [Cucumis sativus] gi|449454786|ref|XP_004145135.1|
           PREDICTED: mitochondral 37S ribosomal protein S27-like
           isoform 2 [Cucumis sativus]
           gi|449454788|ref|XP_004145136.1| PREDICTED: mitochondral
           37S ribosomal protein S27-like isoform 3 [Cucumis
           sativus]
          Length = 102

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/71 (73%), Positives = 60/71 (84%)
 Frame = +1

Query: 1   AQAAVRGVTEARAKIFGHVLNPTGQRSAHKILRKKFIGEKVASWYPKDILKEDPLVVARK 180
           A A  +GVTEARA+IFGH+LNPTGQRS HK+LRKK IG+KV+ WYP DI K+DPLV+AR 
Sbjct: 11  AAAVNKGVTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVSQWYPYDIKKDDPLVMARL 70

Query: 181 EHVRLSKLEML 213
           E  RLSKLEML
Sbjct: 71  EQERLSKLEML 81


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