BLASTX nr result

ID: Atractylodes22_contig00005624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005624
         (1626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98626.1| hypothetical protein 111O18.13 [Coffea canephora]      589   e-166
gb|AAG01118.1|AF273333_3 BAC19.3 [Solanum lycopersicum]               568   e-159
ref|XP_002867001.1| transcription factor IIB family protein [Ara...   564   e-158
ref|NP_195383.1| transcription initiation factor TFIIB [Arabidop...   564   e-158
gb|ABU45181.1| unknown [Capsicum frutescens]                          561   e-157

>gb|AEI98626.1| hypothetical protein 111O18.13 [Coffea canephora]
          Length = 526

 Score =  589 bits (1519), Expect = e-166
 Identities = 316/429 (73%), Positives = 338/429 (78%), Gaps = 12/429 (2%)
 Frame = -1

Query: 1563 MKCPYCAAAQGRCATTSAGRFITECISCGRVVEERQTQSHHLFHIRAQDSPLCLVTSDLP 1384
            M+CPYC+AAQGRC TTS+GR ITEC SCGRVVEERQ+QSHHLFHIRAQDSPLCLVTSDLP
Sbjct: 1    MRCPYCSAAQGRCTTTSSGRSITECTSCGRVVEERQSQSHHLFHIRAQDSPLCLVTSDLP 60

Query: 1383 TLPHSITDQSSTTAVPASEAEEDPFEPTGFITAFSTWSLEPYPVFAQSSLSFAGHLAELE 1204
            TLP   T  S+ T+   +  ++DPFEPTGFITAFSTWSLEPYP+FAQSS+SFAGHLAELE
Sbjct: 61   TLPVPATTDSNPTS---NSDDDDPFEPTGFITAFSTWSLEPYPLFAQSSISFAGHLAELE 117

Query: 1203 RVLETTXXXXXXXXXXXV---------DNLRAYLQIIDVASILGLDCDISDHAFQLFRDC 1051
            RVLETT                     DNLRAYLQIIDVASILGLD DISDHAFQLFRDC
Sbjct: 118  RVLETTSSSSSCSSSSGSNSSGPSVVVDNLRAYLQIIDVASILGLDYDISDHAFQLFRDC 177

Query: 1050 SSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLS 871
            SSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLS
Sbjct: 178  SSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLS 237

Query: 870  QPLNSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPXXXXXXXXXXXSQ 691
            QP+NSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNP            Q
Sbjct: 238  QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQ 297

Query: 690  LEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAIPPEKAFPTATIASGR 511
            LEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY+P +PPEKAFP ATIASGR
Sbjct: 298  LEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYSPVVPPEKAFPMATIASGR 357

Query: 510  SSSTPRIN-DGIEAEIKPVESRDSSNEPWKFQSQNATNSQEMDVDGGIIISEELEKKRNT 334
             SSTPR +   + +  K  ES++            A N +E +    I  S+ L   R  
Sbjct: 358  -SSTPRADLVEVPSSDKQTESKNPRTSDVLDTCHVAKNKEETENRDSIHRSQSLPMHRTP 416

Query: 333  QLW--PPPV 313
             LW   PPV
Sbjct: 417  ILWKSQPPV 425


>gb|AAG01118.1|AF273333_3 BAC19.3 [Solanum lycopersicum]
          Length = 425

 Score =  568 bits (1464), Expect = e-159
 Identities = 307/424 (72%), Positives = 334/424 (78%), Gaps = 8/424 (1%)
 Frame = -1

Query: 1563 MKCPYCAAAQGRCATTSAGRFITECISCGRVVEERQTQSHHLFHIRAQDSPLCLVTSDLP 1384
            M+CPYC+A QGRC ++++GR ITEC SCGRVVEER TQSHHLFH RAQDSPLCL TSDLP
Sbjct: 1    MRCPYCSAEQGRCTSSTSGRPITECTSCGRVVEERLTQSHHLFHTRAQDSPLCLATSDLP 60

Query: 1383 TLPHSITDQSSTTAVPASEAEEDPFEPTGFITAFSTWSLEPYPVFAQSSLSFAGHLAELE 1204
            TLP S T+            +EDPFEPTGFIT FSTWSLEPYPVFAQSS+SFAGHLAELE
Sbjct: 61   TLPISATND-----------DEDPFEPTGFITTFSTWSLEPYPVFAQSSISFAGHLAELE 109

Query: 1203 RVLE-TTXXXXXXXXXXXVDNLRAYLQIIDVASILGLDCDISDHAFQLFRDCSSATCLRN 1027
            RVLE T+           V+NLRAYLQIIDVASIL LD DISDHAFQLFRDCSSATCLRN
Sbjct: 110  RVLEMTSTSSSSSSSSVVVENLRAYLQIIDVASILRLDSDISDHAFQLFRDCSSATCLRN 169

Query: 1026 RSVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLSQPLNSNSI 847
            RSVEALATAALV AIREAQEPRTLQEIS+AANLPQKEIGKYIKILGEALQLSQP+NSNSI
Sbjct: 170  RSVEALATAALVHAIREAQEPRTLQEISVAANLPQKEIGKYIKILGEALQLSQPINSNSI 229

Query: 846  SVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPXXXXXXXXXXXSQLEDKRKTQ 667
            SVHMPRFCTLLQLNKSAQELATHIGEV+INKCFCTRRNP            QLEDKRKTQ
Sbjct: 230  SVHMPRFCTLLQLNKSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKTQ 289

Query: 666  AEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAIPPEKAFPTATIASGRSSSTPRIN 487
            AEICKVTGLTEVTLRKVYKELLENWDDLLPS+Y P +PPEKAFP+ATIA+GR SSTPR++
Sbjct: 290  AEICKVTGLTEVTLRKVYKELLENWDDLLPSSYKPVVPPEKAFPSATIATGR-SSTPRVD 348

Query: 486  --DGIEAE-IKPVESRDSSNEPWKFQSQNATNSQEMDVDGGIIISEELEKKRN---TQL- 328
              +G  +E  KPV+  DS                 +D+   I   E+ + K N   TQL 
Sbjct: 349  IVEGTSSERDKPVKPVDS-----------------LDISPQIRGKEDSDSKDNINTTQLS 391

Query: 327  WPPP 316
            WPPP
Sbjct: 392  WPPP 395


>ref|XP_002867001.1| transcription factor IIB family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297312837|gb|EFH43260.1| transcription factor
            IIB family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 506

 Score =  564 bits (1453), Expect = e-158
 Identities = 296/415 (71%), Positives = 324/415 (78%), Gaps = 23/415 (5%)
 Frame = -1

Query: 1563 MKCPYCAAAQGRCATTSAGRFITECISCGRVVEERQTQSHHLFHIRAQDSPLCLVTSDLP 1384
            MKCPYC++ QGRCATTS+GR ITEC SCGRV+EERQTQ+HHLFH+RAQD+PLCLVTSDL 
Sbjct: 1    MKCPYCSSTQGRCATTSSGRSITECSSCGRVMEERQTQNHHLFHLRAQDTPLCLVTSDL- 59

Query: 1383 TLPHSITDQSSTTAVPASEAEEDPFEPTGFITAFSTWSLEPYPVFAQSSLSFAGHLAELE 1204
                       T   P+ E EEDPFEPTGFITAFSTWSLEP P+FA+SSLSF+GHLAELE
Sbjct: 60   ----------QTATQPSLEDEEDPFEPTGFITAFSTWSLEPSPIFARSSLSFSGHLAELE 109

Query: 1203 RVLE-TTXXXXXXXXXXXVDNLRAYLQIIDVASILGLDCDISDHAFQLFRDCSSATCLRN 1027
            R LE  +           VDNLRAY+QIIDVASILGLDCDIS+HAFQLFRDC SATCLRN
Sbjct: 110  RTLELASSTSNSNSSTVVVDNLRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRN 169

Query: 1026 RSVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLSQPLNSNSI 847
            RSVEALATA LVQAIREAQEPRTLQEISIAAN+ QKEIGKYIKILGEALQLSQP+NSNSI
Sbjct: 170  RSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSI 229

Query: 846  SVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPXXXXXXXXXXXSQLEDKRKTQ 667
            SVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNP            QLEDKRKTQ
Sbjct: 230  SVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQ 289

Query: 666  AEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAIPPEKAFPTATIASGRSSSTPRIN 487
            AEICK+TGLTEVTLRKVYKELLENWDDLLPSNYTPA+PPEKAFPT TI++ R S+TPR  
Sbjct: 290  AEICKITGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTISTTR-STTPRAA 348

Query: 486  DGIE--------AEIKPVESRDSS--------------NEPWKFQSQNATNSQEM 388
            D  E          +KP+E+ D +               +PW F + +  N  EM
Sbjct: 349  DPPEPSFVDRDKPSVKPIETSDHTYQQPKGKEDKQPKFRQPWLFGTASVMNPGEM 403


>ref|NP_195383.1| transcription initiation factor TFIIB [Arabidopsis thaliana]
            gi|2464915|emb|CAB16810.1| transcription initiation
            factor like protein [Arabidopsis thaliana]
            gi|7270613|emb|CAB80331.1| transcription initiation
            factor like protein [Arabidopsis thaliana]
            gi|16509378|emb|CAC82714.1| TFIIB-related protein
            [Arabidopsis thaliana] gi|30102720|gb|AAP21278.1|
            At4g37010 [Arabidopsis thaliana]
            gi|39545884|gb|AAR28005.1| TFIIB5/pBrp [Arabidopsis
            thaliana] gi|332661282|gb|AEE86682.1| transcription
            initiation factor TFIIB [Arabidopsis thaliana]
          Length = 503

 Score =  564 bits (1453), Expect = e-158
 Identities = 297/415 (71%), Positives = 324/415 (78%), Gaps = 23/415 (5%)
 Frame = -1

Query: 1563 MKCPYCAAAQGRCATTSAGRFITECISCGRVVEERQTQSHHLFHIRAQDSPLCLVTSDLP 1384
            MKCPYC++AQGRC TTS+GR ITEC SCGRV+EERQTQ+HHLFH+RAQD+PLCLVTSDL 
Sbjct: 1    MKCPYCSSAQGRCTTTSSGRSITECSSCGRVMEERQTQNHHLFHLRAQDTPLCLVTSDL- 59

Query: 1383 TLPHSITDQSSTTAVPASEAEEDPFEPTGFITAFSTWSLEPYPVFAQSSLSFAGHLAELE 1204
                       T A P+ E EEDPFEPTGFITAFSTWSLEP P+FA+SSLSF+GHLAELE
Sbjct: 60   ----------QTAAQPSPEDEEDPFEPTGFITAFSTWSLEPSPIFARSSLSFSGHLAELE 109

Query: 1203 RVLE-TTXXXXXXXXXXXVDNLRAYLQIIDVASILGLDCDISDHAFQLFRDCSSATCLRN 1027
            R LE  +           VDNLRAY+QIIDVASILGLDCDIS+HAFQLFRDC SATCLRN
Sbjct: 110  RTLELASSTSNSNSSTVVVDNLRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRN 169

Query: 1026 RSVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLSQPLNSNSI 847
            RSVEALATA LVQAIREAQEPRTLQEISIAAN+ QKEIGKYIKILGEALQLSQP+NSNSI
Sbjct: 170  RSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSI 229

Query: 846  SVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPXXXXXXXXXXXSQLEDKRKTQ 667
            SVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNP            QLEDKRKTQ
Sbjct: 230  SVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQ 289

Query: 666  AEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAIPPEKAFPTATIASGRSSSTPRIN 487
            AEICK+TGLTEVTLRKVYKELLENWDDLLPSNYTPA+PPEKAFPT TI++ R S+TPR  
Sbjct: 290  AEICKITGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTISTTR-STTPRAV 348

Query: 486  DGIEAEI--------KPVESRDSS--------------NEPWKFQSQNATNSQEM 388
            D  E           KP+E+ D +               +PW F + +  N  EM
Sbjct: 349  DPPEPSFVEKDKPSAKPIETFDHTYQQPKGKEDKQPKFRQPWLFGTASVMNPAEM 403


>gb|ABU45181.1| unknown [Capsicum frutescens]
          Length = 426

 Score =  561 bits (1447), Expect = e-157
 Identities = 296/401 (73%), Positives = 329/401 (82%), Gaps = 8/401 (1%)
 Frame = -1

Query: 1563 MKCPYCAAAQGRCATTSAGRFITECISCGRVVEERQTQSHHLFHIRAQDSPLCLVTSDLP 1384
            M+CPYC+A Q RCAT+++GR ITEC SCGRVVEER TQSHHLFH RAQDSPLCL TSDLP
Sbjct: 1    MRCPYCSAEQARCATSTSGRPITECTSCGRVVEERLTQSHHLFHTRAQDSPLCLATSDLP 60

Query: 1383 TLPHSITDQSSTTAVPASEAEEDPFEPTGFITAFSTWSLEPYPVFAQSSLSFAGHLAELE 1204
            TLP           + A+  ++DPFEPTGFITAFSTWSLEPYPVFAQSS+SFAGHLAELE
Sbjct: 61   TLP-----------ISATHDDDDPFEPTGFITAFSTWSLEPYPVFAQSSISFAGHLAELE 109

Query: 1203 RVLETTXXXXXXXXXXXV--DNLRAYLQIIDVASILGLDCDISDHAFQLFRDCSSATCLR 1030
            RVLETT           V  +NLRAYLQIIDVASIL LD DISDHAFQLFRDCSSATCLR
Sbjct: 110  RVLETTSSSSSSSTSSSVVVENLRAYLQIIDVASILRLDYDISDHAFQLFRDCSSATCLR 169

Query: 1029 NRSVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLSQPLNSNS 850
            NRSVEALATAALV AIREAQEPRTLQEIS+AANLPQKEIGKYIKILGEALQLSQP+NSNS
Sbjct: 170  NRSVEALATAALVHAIREAQEPRTLQEISVAANLPQKEIGKYIKILGEALQLSQPINSNS 229

Query: 849  ISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPXXXXXXXXXXXSQLEDKRKT 670
            ISVHMPRFCTLLQLNKSAQELATHIGEV+INKCFCTRRNP            QLEDKRKT
Sbjct: 230  ISVHMPRFCTLLQLNKSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKT 289

Query: 669  QAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAIPPEKAFPTATIASGRSSSTPRI 490
            QAEICKVTGLTEVTLRKVYKELLENWDDLLPS+Y P +PP+KAFP+A I +GR SST R+
Sbjct: 290  QAEICKVTGLTEVTLRKVYKELLENWDDLLPSSYKPVVPPDKAFPSAAIPTGR-SSTLRV 348

Query: 489  N--DGIEAE----IKPVESRDSSNEPWKFQSQNATNSQEMD 385
            +  +G  +E    +KPV+S D+S +    +S+  ++S++ D
Sbjct: 349  DLVEGTSSERDKPVKPVDSLDASPQ---IRSKEDSHSKDND 386


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