BLASTX nr result
ID: Atractylodes22_contig00005604
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00005604
(1149 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520518.1| protein with unknown function [Ricinus commu... 96 1e-28
ref|XP_004143132.1| PREDICTED: transcription initiation factor I... 96 3e-27
ref|XP_003537974.1| PREDICTED: uncharacterized protein LOC100800... 91 1e-23
ref|XP_003539601.1| PREDICTED: transcription initiation factor I... 91 9e-22
ref|XP_003539600.1| PREDICTED: transcription initiation factor I... 91 1e-21
>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
gi|223540360|gb|EEF41931.1| protein with unknown
function [Ricinus communis]
Length = 383
Score = 92.8 bits (229), Expect(2) = 1e-28
Identities = 44/65 (67%), Positives = 49/65 (75%)
Frame = +2
Query: 233 IIVADNEKPVLGLKLSSRIPQLDGPIPDPYDDALSTPNIYNYQGVVNEDYNVVNTPAPPE 412
+I AD E + +IPQLDGPIPDPYDD LSTPNIYNYQGV NEDYN+ NTPAP +
Sbjct: 235 VISADIEILSSVTRRGLKIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIANTPAPND 294
Query: 413 LQAPT 427
LQA T
Sbjct: 295 LQAST 299
Score = 61.2 bits (147), Expect(2) = 1e-28
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = +3
Query: 3 NQPTTQDFFLLSAGKRKRDEFPSQYRPGGYIPQQDGAADVIADKFEV 143
NQP TQDFF ++GKRKR++F +QY GG+IPQQDGA D + +V
Sbjct: 184 NQPLTQDFFTGASGKRKREDFAAQYNNGGFIPQQDGAGDTPFEVLQV 230
Score = 95.5 bits (236), Expect(2) = 5e-21
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = +1
Query: 589 VDQGEELNTQHLVLAQFDKVTRAKSRWRCTLKDGIMHINNKDVLFNK 729
VDQGE++NTQHLVLAQFDKVTR KSRW+CTLKDGIMHINNKD+LFNK
Sbjct: 330 VDQGEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 376
Score = 32.7 bits (73), Expect(2) = 5e-21
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 789 KDVLFNKATGEFDF 830
KD+LFNKATGEFDF
Sbjct: 370 KDILFNKATGEFDF 383
>ref|XP_004143132.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Cucumis sativus] gi|449496658|ref|XP_004160191.1|
PREDICTED: transcription initiation factor IIA large
subunit-like [Cucumis sativus]
Length = 402
Score = 87.0 bits (214), Expect(2) = 3e-27
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = +2
Query: 215 SNSQPGIIVADNEKPVLGLKLSS-RIPQLDGPIPDPYDDALSTPNIYNYQGVVNEDYNVV 391
S+ +PG I + ++ S +IPQLDGP+PDPYDD LSTPNIYNYQGV NEDYN+
Sbjct: 246 SDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNEDYNIA 305
Query: 392 NTPAPPELQAPT 427
NTPAP + A T
Sbjct: 306 NTPAPNDPPAGT 317
Score = 62.4 bits (150), Expect(2) = 3e-27
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +3
Query: 15 TQDFFLLSAGKRKRDEFPSQYRPGGYIPQQDGAADVIADKFEV 143
TQDFF++++GKRKRD+F SQY+ G+IPQQDGA D FE+
Sbjct: 196 TQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEI 238
Score = 95.5 bits (236), Expect(2) = 5e-21
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +1
Query: 589 VDQGEELNTQHLVLAQFDKVTRAKSRWRCTLKDGIMHINNKDVLFNK 729
VDQGEEL+TQHLVLAQFDKVTR KSRW+CTLKDGIMHINNKD+LFNK
Sbjct: 349 VDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 395
Score = 32.7 bits (73), Expect(2) = 5e-21
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 789 KDVLFNKATGEFDF 830
KD+LFNKATGEFDF
Sbjct: 389 KDILFNKATGEFDF 402
>ref|XP_003537974.1| PREDICTED: uncharacterized protein LOC100800601 [Glycine max]
Length = 392
Score = 72.0 bits (175), Expect(2) = 1e-23
Identities = 39/70 (55%), Positives = 49/70 (70%)
Frame = +2
Query: 218 NSQPGIIVADNEKPVLGLKLSSRIPQLDGPIPDPYDDALSTPNIYNYQGVVNEDYNVVNT 397
++ G + A +++P +S+IPQLDGPIP DD LSTPNIYNY GV NEDYN+ NT
Sbjct: 247 STSKGKMPAQSDRP------ASQIPQLDGPIPYD-DDVLSTPNIYNY-GVFNEDYNIANT 298
Query: 398 PAPPELQAPT 427
PAP E+ A T
Sbjct: 299 PAPSEVPAST 308
Score = 65.5 bits (158), Expect(2) = 1e-23
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = +3
Query: 3 NQPTTQDFFLLSAGKRKRDEFPSQYRPGGYIPQQDGAADVIADKFEV 143
NQP TQDFF+ S+GKRKRDE SQY GGYIPQQDGA D + E+
Sbjct: 188 NQPLTQDFFM-SSGKRKRDEIASQYNAGGYIPQQDGAGDAASQILEI 233
Score = 90.9 bits (224), Expect(2) = 1e-19
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = +1
Query: 589 VDQGEELNTQHLVLAQFDKVTRAKSRWRCTLKDGIMHINNKDVLFNK 729
+DQGE+ NT HLVLAQFDKVTR KSRW+CTLKDGIMHINNKD+LFNK
Sbjct: 339 LDQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 385
Score = 32.7 bits (73), Expect(2) = 1e-19
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 789 KDVLFNKATGEFDF 830
KD+LFNKATGEFDF
Sbjct: 379 KDILFNKATGEFDF 392
>ref|XP_003539601.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoform 2 [Glycine max]
Length = 389
Score = 67.0 bits (162), Expect(2) = 9e-22
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = +3
Query: 3 NQPTTQDFFLLSAGKRKRDEFPSQYRPGGYIPQQDGAADVIADKFEV 143
NQP TQDFF+ S+GKRKRDE SQY GGYIPQQDGA D + FE+
Sbjct: 184 NQPLTQDFFM-SSGKRKRDEIASQYNAGGYIPQQDGAGDADSQIFEI 229
Score = 63.9 bits (154), Expect(2) = 9e-22
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +2
Query: 230 GIIVADNEKPVLGLKLSSRIPQLDGPIPDPYDDALSTPNIYNYQGVVNEDYNVVNTPAPP 409
G ++ + P + +S+IPQ DGPIP DD +STPN+YNY GV NEDYN+ NTPA
Sbjct: 241 GHSTSNGKMPAHSDRPASQIPQFDGPIPYD-DDVVSTPNMYNY-GVFNEDYNIANTPASS 298
Query: 410 ELQAPT 427
++ A T
Sbjct: 299 DVPAST 304
Score = 90.9 bits (224), Expect(2) = 4e-19
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = +1
Query: 589 VDQGEELNTQHLVLAQFDKVTRAKSRWRCTLKDGIMHINNKDVLFNK 729
+DQGE+ NT HLVLAQFDKVTR KSRW+CTLKDGIMHINNKD+LFNK
Sbjct: 336 LDQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 382
Score = 31.2 bits (69), Expect(2) = 4e-19
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +3
Query: 789 KDVLFNKATGEFDF 830
KD+LFNKATGEF+F
Sbjct: 376 KDILFNKATGEFEF 389
>ref|XP_003539600.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoform 1 [Glycine max]
Length = 382
Score = 67.0 bits (162), Expect(2) = 1e-21
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = +3
Query: 3 NQPTTQDFFLLSAGKRKRDEFPSQYRPGGYIPQQDGAADVIADKFEV 143
NQP TQDFF+ S+GKRKRDE SQY GGYIPQQDGA D + FE+
Sbjct: 184 NQPLTQDFFM-SSGKRKRDEIASQYNAGGYIPQQDGAGDADSQIFEI 229
Score = 63.5 bits (153), Expect(2) = 1e-21
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +2
Query: 242 ADNEKPVLGLKLSSRIPQLDGPIPDPYDDALSTPNIYNYQGVVNEDYNVVNTPAPPELQA 421
++ + P + +S+IPQ DGPIP DD +STPN+YNY GV NEDYN+ NTPA ++ A
Sbjct: 238 SNGKMPAHSDRPASQIPQFDGPIPYD-DDVVSTPNMYNY-GVFNEDYNIANTPASSDVPA 295
Query: 422 PT 427
T
Sbjct: 296 ST 297
Score = 90.9 bits (224), Expect(2) = 4e-19
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = +1
Query: 589 VDQGEELNTQHLVLAQFDKVTRAKSRWRCTLKDGIMHINNKDVLFNK 729
+DQGE+ NT HLVLAQFDKVTR KSRW+CTLKDGIMHINNKD+LFNK
Sbjct: 329 LDQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 375
Score = 31.2 bits (69), Expect(2) = 4e-19
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +3
Query: 789 KDVLFNKATGEFDF 830
KD+LFNKATGEF+F
Sbjct: 369 KDILFNKATGEFEF 382