BLASTX nr result

ID: Atractylodes22_contig00005598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005598
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49198.2|RS3A_HELAN RecName: Full=40S ribosomal protein S3a g...   245   4e-63
gb|ABB72801.1| 40S ribosomal protein S3a-like protein [Solanum t...   244   1e-62
sp|P33444.4|RS3A_CATRO RecName: Full=40S ribosomal protein S3a; ...   242   4e-62
ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [C...   240   2e-61
dbj|BAA00860.1| cyc07 [Catharanthus roseus]                           240   2e-61

>sp|P49198.2|RS3A_HELAN RecName: Full=40S ribosomal protein S3a gi|469248|gb|AAA80978.1|
           ribosomal protein S3a [Helianthus annuus]
          Length = 260

 Score =  245 bits (626), Expect = 4e-63
 Identities = 125/144 (86%), Positives = 130/144 (90%)
 Frame = -3

Query: 645 WQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMVNQA 466
           WQSLIEAHVDVKTTD++TLRMFCIGFTKKRANQVKRTCYAQSSQI+QIRRKMREIMV QA
Sbjct: 117 WQSLIEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQA 176

Query: 465 QSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 286
           Q+CDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYS
Sbjct: 177 QTCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYS 236

Query: 285 EDVGVKXXXXXXXXXXXXXEVIGA 214
           EDVGVK             EVIGA
Sbjct: 237 EDVGVKLDRPAEEAAPEATEVIGA 260


>gb|ABB72801.1| 40S ribosomal protein S3a-like protein [Solanum tuberosum]
          Length = 260

 Score =  244 bits (622), Expect = 1e-62
 Identities = 125/144 (86%), Positives = 128/144 (88%)
 Frame = -3

Query: 645 WQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMVNQA 466
           WQSLIEAHVDVKTTDSYTLRMFCIGFTKKR NQ KRTCYAQSSQIRQIRRKMREIMVNQA
Sbjct: 117 WQSLIEAHVDVKTTDSYTLRMFCIGFTKKRPNQQKRTCYAQSSQIRQIRRKMREIMVNQA 176

Query: 465 QSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 286
           QSCDLK+LV KFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLG+LMEVHGDYS
Sbjct: 177 QSCDLKDLVLKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGRLMEVHGDYS 236

Query: 285 EDVGVKXXXXXXXXXXXXXEVIGA 214
           EDVGVK             EV+GA
Sbjct: 237 EDVGVKVDRPAEDVATEPTEVVGA 260


>sp|P33444.4|RS3A_CATRO RecName: Full=40S ribosomal protein S3a; AltName: Full=CYC07
           protein
          Length = 261

 Score =  242 bits (618), Expect = 4e-62
 Identities = 126/145 (86%), Positives = 129/145 (88%), Gaps = 1/145 (0%)
 Frame = -3

Query: 645 WQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMVNQA 466
           WQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQ KRTCYAQSSQIRQIRRKMREIMVNQA
Sbjct: 117 WQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQA 176

Query: 465 QSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 286
           QSCDLK+LVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+
Sbjct: 177 QSCDLKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYN 236

Query: 285 E-DVGVKXXXXXXXXXXXXXEVIGA 214
           E D+G K             EVIGA
Sbjct: 237 EDDIGTKLDRPAEEAVAEPTEVIGA 261


>ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
           gi|449518719|ref|XP_004166384.1| PREDICTED: 40S
           ribosomal protein S3a-like [Cucumis sativus]
          Length = 261

 Score =  240 bits (612), Expect = 2e-61
 Identities = 118/126 (93%), Positives = 123/126 (97%)
 Frame = -3

Query: 645 WQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMVNQA 466
           W +LIEAHVDVKTTD+YTLRMFCIGFTK+R NQVKRTCYAQSSQIRQIRRKMREIMVNQA
Sbjct: 117 WHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA 176

Query: 465 QSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 286
            SCDLKELV+KFIPESIG+EIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS
Sbjct: 177 SSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 236

Query: 285 EDVGVK 268
           EDVGVK
Sbjct: 237 EDVGVK 242


>dbj|BAA00860.1| cyc07 [Catharanthus roseus]
          Length = 245

 Score =  240 bits (612), Expect = 2e-61
 Identities = 119/122 (97%), Positives = 121/122 (99%)
 Frame = -3

Query: 645 WQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMVNQA 466
           WQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQ KRTCYAQSSQIRQIRRKMREIMVNQA
Sbjct: 117 WQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQA 176

Query: 465 QSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 286
           QSCDLK+LVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+
Sbjct: 177 QSCDLKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYN 236

Query: 285 ED 280
           ED
Sbjct: 237 ED 238


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