BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005535
         (1545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   286   1e-74
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              286   1e-74
ref|NP_565856.1| RNApolymerase sigma-subunit F [Arabidopsis thal...   270   1e-69
ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis ...   270   1e-69
emb|CAB60192.1| putative sigma-like transcription factor [Arabid...   270   1e-69

>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  286 bits (731), Expect = 1e-74
 Identities = 157/299 (52%), Positives = 202/299 (67%), Gaps = 13/299 (4%)
 Frame = +2

Query: 686  QSKRRKGTKSNLIVRETSTSTKAEPVKRTTYRDSNLHDPLRMFLARPVTRELLTSKEELE 865
            +SK+R+  K  + V E   S +AE V+R      +  DPLR+FL  P TR+LLT+KEE E
Sbjct: 224  RSKKRRNPK--VAVHENHGSRRAE-VQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESE 280

Query: 866  LIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQHGIS-------------SREKLICAN 1006
            LIV                                G+S             SR+KLI AN
Sbjct: 281  LIVQIQELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYAN 340

Query: 1007 LRMVVYIAKQYRGRGLDLQDLLQEGSMGLMRSVLKFKPQAGCRFATYAYWWIRQSIRRAI 1186
            LRMVV+IAKQY+GRGL+LQDLLQEGSMGLM SV KFKP AGCRFA+YAYWWIRQ++R+AI
Sbjct: 341  LRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAI 400

Query: 1187 FQNSKLIRLPEGVYTLLYKVSEAKRICIREGHHEPTQKQIAAQAGMPVEKVQKLRSIQKI 1366
            FQ+S+ IRLPE +Y+LL KV EAKR+ I+EGHH+PT+++IA + G+ +EK+Q+L    ++
Sbjct: 401  FQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRM 460

Query: 1367 TLSLQQPVWPDDSTTYEEITADTTIDSPDTSASKQLMRNHISNLLGVLNPKERKVIRHR 1543
             LS+QQPVW D  TT++E+TADT I+ PD S +KQLMR H+ NLL VL PKER++IR R
Sbjct: 461  PLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLR 519


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  286 bits (731), Expect = 1e-74
 Identities = 157/299 (52%), Positives = 202/299 (67%), Gaps = 13/299 (4%)
 Frame = +2

Query: 686  QSKRRKGTKSNLIVRETSTSTKAEPVKRTTYRDSNLHDPLRMFLARPVTRELLTSKEELE 865
            +SK+R+  K  + V E   S +AE V+R      +  DPLR+FL  P TR+LLT+KEE E
Sbjct: 213  RSKKRRNPK--VAVHENHGSRRAE-VQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESE 269

Query: 866  LIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQHGIS-------------SREKLICAN 1006
            LIV                                G+S             SR+KLI AN
Sbjct: 270  LIVQIQELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYAN 329

Query: 1007 LRMVVYIAKQYRGRGLDLQDLLQEGSMGLMRSVLKFKPQAGCRFATYAYWWIRQSIRRAI 1186
            LRMVV+IAKQY+GRGL+LQDLLQEGSMGLM SV KFKP AGCRFA+YAYWWIRQ++R+AI
Sbjct: 330  LRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAI 389

Query: 1187 FQNSKLIRLPEGVYTLLYKVSEAKRICIREGHHEPTQKQIAAQAGMPVEKVQKLRSIQKI 1366
            FQ+S+ IRLPE +Y+LL KV EAKR+ I+EGHH+PT+++IA + G+ +EK+Q+L    ++
Sbjct: 390  FQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRM 449

Query: 1367 TLSLQQPVWPDDSTTYEEITADTTIDSPDTSASKQLMRNHISNLLGVLNPKERKVIRHR 1543
             LS+QQPVW D  TT++E+TADT I+ PD S +KQLMR H+ NLL VL PKER++IR R
Sbjct: 450  PLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLR 508


>ref|NP_565856.1| RNApolymerase sigma-subunit F [Arabidopsis thaliana]
            gi|75173811|sp|Q9LD95.1|SIGF_ARATH RecName: Full=RNA
            polymerase sigma factor sigF, chloroplastic; Short=Sigma
            factor F; Short=Sigma-F; AltName: Full=Protein SINGLET
            OXYGEN-LINKED DEATH ACTIVATOR 8; AltName: Full=RNA
            polymerase sigma factor sig6; Short=Atsig6; Short=Sigma
            factor 6; Flags: Precursor gi|7209640|dbj|BAA92288.1|
            SigF [Arabidopsis thaliana] gi|7688083|emb|CAB89775.1|
            sigma factor-like protein [Arabidopsis thaliana]
            gi|16604647|gb|AAL24116.1| putative RNA polymerase
            sigma-70 factor [Arabidopsis thaliana]
            gi|20197948|gb|AAD31584.2| putative RNA polymerase
            sigma-70 factor [Arabidopsis thaliana]
            gi|20259557|gb|AAM14121.1| putative RNA polymerase
            sigma-70 factor protein [Arabidopsis thaliana]
            gi|330254238|gb|AEC09332.1| RNApolymerase sigma-subunit F
            [Arabidopsis thaliana]
          Length = 547

 Score =  270 bits (689), Expect = 1e-69
 Identities = 145/299 (48%), Positives = 191/299 (63%), Gaps = 13/299 (4%)
 Frame = +2

Query: 686  QSKRRKGTKSNLIVRETSTSTKAEPVKRTTYRDSNLHDPLRMFLARPVTRELLTSKEELE 865
            ++K R+  KSN +  E     K    K+      N  D L++FL  P T++LLT+KEE E
Sbjct: 197  RAKNRRAPKSNDVDDEGYVPQKTSAKKKYKQGADN-DDALQLFLWGPETKQLLTAKEEAE 255

Query: 866  LI-------------VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQHGISSREKLICAN 1006
            LI                                           +  G SSREKLI AN
Sbjct: 256  LISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGRSSREKLITAN 315

Query: 1007 LRMVVYIAKQYRGRGLDLQDLLQEGSMGLMRSVLKFKPQAGCRFATYAYWWIRQSIRRAI 1186
            LR+VV+IAKQY+ RGL+ QDLLQEGSMGLM+SV KFKPQ+GCRFATYAYWWIRQSIR++I
Sbjct: 316  LRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSI 375

Query: 1187 FQNSKLIRLPEGVYTLLYKVSEAKRICIREGHHEPTQKQIAAQAGMPVEKVQKLRSIQKI 1366
            FQNS+ IRLPE VY LL KVSEA++ C++EG++ P+++++A   G+  EK+ KL    + 
Sbjct: 376  FQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRT 435

Query: 1367 TLSLQQPVWPDDSTTYEEITADTTIDSPDTSASKQLMRNHISNLLGVLNPKERKVIRHR 1543
             LS+QQP+W D  TT++EIT D+ I++P  S  KQLMRNH+ NLL VL+PKER++I+ R
Sbjct: 436  PLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLR 494


>ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis lyrata subsp. lyrata]
            gi|297327323|gb|EFH57743.1| RNA polymerase sigma-70
            factor [Arabidopsis lyrata subsp. lyrata]
          Length = 546

 Score =  270 bits (689), Expect = 1e-69
 Identities = 144/299 (48%), Positives = 192/299 (64%), Gaps = 13/299 (4%)
 Frame = +2

Query: 686  QSKRRKGTKSNLIVRETSTSTKAEPVKRTTYRDSNLHDPLRMFLARPVTRELLTSKEELE 865
            ++K R+  KSN +  E     K    K+   +  +  D L++FL  P T++LLT+KEE E
Sbjct: 196  RAKNRRAPKSNDVDNEGYVPQKIN-AKKKFKQGVDTDDALQLFLWGPETKQLLTAKEEAE 254

Query: 866  LI-------------VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQHGISSREKLICAN 1006
            LI                                           +  G SSREKLI AN
Sbjct: 255  LISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPDLKSEIHRGRSSREKLITAN 314

Query: 1007 LRMVVYIAKQYRGRGLDLQDLLQEGSMGLMRSVLKFKPQAGCRFATYAYWWIRQSIRRAI 1186
            LR+VV+IAKQY+ RGL+ QDLLQEGSMGLM+SV KFKPQ+GCRFATYAYWWIRQSIR++I
Sbjct: 315  LRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSI 374

Query: 1187 FQNSKLIRLPEGVYTLLYKVSEAKRICIREGHHEPTQKQIAAQAGMPVEKVQKLRSIQKI 1366
            FQNS+ IRLPE VY LL KVSEA++ C++EG++ P+++Q+A   G+  EK+ KL    + 
Sbjct: 375  FQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEQLAGHVGVSTEKLDKLLYNTRT 434

Query: 1367 TLSLQQPVWPDDSTTYEEITADTTIDSPDTSASKQLMRNHISNLLGVLNPKERKVIRHR 1543
             LS+QQP+W D  TT++EIT D+ I++P  S  KQ+MRNH+ NLL VL+PKER++I+ R
Sbjct: 435  PLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQMMRNHVRNLLNVLSPKERRIIKLR 493


>emb|CAB60192.1| putative sigma-like transcription factor [Arabidopsis thaliana]
          Length = 487

 Score =  270 bits (689), Expect = 1e-69
 Identities = 145/299 (48%), Positives = 191/299 (63%), Gaps = 13/299 (4%)
 Frame = +2

Query: 686  QSKRRKGTKSNLIVRETSTSTKAEPVKRTTYRDSNLHDPLRMFLARPVTRELLTSKEELE 865
            ++K R+  KSN +  E     K    K+      N  D L++FL  P T++LLT+KEE E
Sbjct: 137  RAKNRRAPKSNDVDDEGYVPQKTSAKKKYKQGADN-DDALQLFLWGPETKQLLTAKEEAE 195

Query: 866  LI-------------VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQHGISSREKLICAN 1006
            LI                                           +  G SSREKLI AN
Sbjct: 196  LISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGRSSREKLITAN 255

Query: 1007 LRMVVYIAKQYRGRGLDLQDLLQEGSMGLMRSVLKFKPQAGCRFATYAYWWIRQSIRRAI 1186
            LR+VV+IAKQY+ RGL+ QDLLQEGSMGLM+SV KFKPQ+GCRFATYAYWWIRQSIR++I
Sbjct: 256  LRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSI 315

Query: 1187 FQNSKLIRLPEGVYTLLYKVSEAKRICIREGHHEPTQKQIAAQAGMPVEKVQKLRSIQKI 1366
            FQNS+ IRLPE VY LL KVSEA++ C++EG++ P+++++A   G+  EK+ KL    + 
Sbjct: 316  FQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRT 375

Query: 1367 TLSLQQPVWPDDSTTYEEITADTTIDSPDTSASKQLMRNHISNLLGVLNPKERKVIRHR 1543
             LS+QQP+W D  TT++EIT D+ I++P  S  KQLMRNH+ NLL VL+PKER++I+ R
Sbjct: 376  PLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLR 434