BLASTX nr result

ID: Atractylodes22_contig00005437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005437
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   107   1e-21
ref|NP_001061315.2| Os08g0236200 [Oryza sativa Japonica Group] g...   107   1e-21
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...   107   1e-21
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...   104   7e-21
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]   104   7e-21

>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  107 bits (267), Expect = 1e-21
 Identities = 45/78 (57%), Positives = 60/78 (76%)
 Frame = +1

Query: 1    LYQTTPTYSHIRTFGCLCFPHNSAPTAHKLDARSTPCVFLGFPPNHRGYQCLDTSTNQLL 180
            LY   P+Y+H+R FGC C+P+ SA   HKL  RST C+FLG+P +H+GY+CLD STN+++
Sbjct: 826  LYGVHPSYAHLRVFGCKCYPNLSATAPHKLSPRSTMCIFLGYPLHHKGYRCLDPSTNRVI 885

Query: 181  ISRHVTFDESSFPFNSSS 234
            ISRHV FDE SFP+ + S
Sbjct: 886  ISRHVVFDEHSFPYANIS 903


>ref|NP_001061315.2| Os08g0236200 [Oryza sativa Japonica Group]
           gi|255678262|dbj|BAF23229.2| Os08g0236200 [Oryza sativa
           Japonica Group]
          Length = 624

 Score =  107 bits (266), Expect = 1e-21
 Identities = 46/87 (52%), Positives = 61/87 (70%)
 Frame = +1

Query: 1   LYQTTPTYSHIRTFGCLCFPHNSAPTAHKLDARSTPCVFLGFPPNHRGYQCLDTSTNQLL 180
           L+   P YS++R FGCLC+P+ SA T HKL  RS PCVFLG+P +H+G++CLD ST +L 
Sbjct: 273 LHNKLPDYSNLRVFGCLCYPNLSATTPHKLSPRSAPCVFLGYPASHKGFRCLDISTRRLY 332

Query: 181 ISRHVTFDESSFPFNSSSIQPPDYTFL 261
           ISRHV FD+ +FPF +       + FL
Sbjct: 333 ISRHVVFDDKTFPFAAIPQDASSFDFL 359


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1679

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/88 (55%), Positives = 62/88 (70%)
 Frame = +1

Query: 1    LYQTTPTYSHIRTFGCLCFPHNSAPTAHKLDARSTPCVFLGFPPNHRGYQCLDTSTNQLL 180
            LY T P+YSH+R FGC C+P+ SA T HKL  RST CVFLG+P  H+GY+C D  +N+++
Sbjct: 908  LYGTHPSYSHLRVFGCKCYPNLSATTPHKLAPRSTMCVFLGYPLYHKGYRCFDPLSNRVI 967

Query: 181  ISRHVTFDESSFPFNSSSIQPPDYTFLD 264
            ISRHV FDE SFPF   +    + T LD
Sbjct: 968  ISRHVVFDEHSFPFTELTNGVSNATDLD 995


>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 978

 Score =  104 bits (260), Expect = 7e-21
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = +1

Query: 1   LYQTTPTYSHIRTFGCLCFPHNSAPTAHKLDARSTPCVFLGFPPNHRGYQCLDTSTNQLL 180
           L+   P YS++R FGCLC+P+ SA T HKL  RS  CVFLG+P +H+G++CLD ST  L 
Sbjct: 245 LHNKLPDYSNLRVFGCLCYPNLSATTPHKLSPRSAACVFLGYPASHKGFRCLDISTRHLY 304

Query: 181 ISRHVTFDESSFPFNSSSIQPPDYTFL 261
           ISRHV FDE +FPF +       + FL
Sbjct: 305 ISRHVVFDEQTFPFAAVPQDASSFDFL 331


>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
          Length = 1334

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/82 (60%), Positives = 57/82 (69%)
 Frame = +1

Query: 1   LYQTTPTYSHIRTFGCLCFPHNSAPTAHKLDARSTPCVFLGFPPNHRGYQCLDTSTNQLL 180
           L+   P Y H+R FGCLCFP     T HKL  RST CVFLG+ P H+GY CLD STN++ 
Sbjct: 692 LFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIY 751

Query: 181 ISRHVTFDESSFPFNSSSIQPP 246
           ISR+V F ESSFPF SSS  PP
Sbjct: 752 ISRNVIFHESSFPFQSSS--PP 771


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