BLASTX nr result

ID: Atractylodes22_contig00005310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005310
         (1869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C,...   424   e-116
ref|XP_003594254.1| RNA-binding protein, putative [Medicago trun...   421   e-115
ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C,...   414   e-113
ref|XP_002308799.1| predicted protein [Populus trichocarpa] gi|2...   413   e-113
ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246...   406   e-111

>ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
            communis] gi|223532357|gb|EEF34155.1| Heterogeneous
            nuclear ribonucleoprotein 27C, putative [Ricinus
            communis]
          Length = 456

 Score =  424 bits (1090), Expect = e-116
 Identities = 247/465 (53%), Positives = 293/465 (63%), Gaps = 43/465 (9%)
 Frame = +1

Query: 298  MEIEPGKLFIGGISWDTNEERLRDYFQTFGEVIEAVIMKDRTTGRARGFGFIVFSDPTVA 477
            ME+E GKLFIGGISWDTNE+RLR+YFQ FGEV+EAVIMKDR TGRARGFGF+VF+DP VA
Sbjct: 1    MEMELGKLFIGGISWDTNEDRLREYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVA 60

Query: 478  ERVVKEKHIIDGRAVEAKKAVPRDDQQNRSNGNGSSVQGSPGPTRTKKIFVGGLASTVTE 657
            ERVV EKH+IDGR VEAKKAVPR+DQ   +  + SS+ GSP P RTKKIFVGGLASTVTE
Sbjct: 61   ERVVMEKHLIDGRNVEAKKAVPREDQNILNRNSSSSIHGSPSPARTKKIFVGGLASTVTE 120

Query: 658  SEFKNYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLKTFHELNGKMVEVK 837
            S+FK YF+QFGT TDVVVMYDHNTQRPRGFGFITYDSEE+V+KVL KTFHELNGKMVEVK
Sbjct: 121  SDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLHKTFHELNGKMVEVK 180

Query: 838  RAVPKDSSPGANRSP---YSYGLSRVSSYFSGYGQGFNPSSLGGYG-----RFSPSPGPG 993
            RAVPK+ SPG  R+    Y+YG +RV S+ S Y QG++P+S GG G     RFSP     
Sbjct: 181  RAVPKELSPGPTRTQLNGYNYGPNRVGSFLSSYTQGYSPNSTGGLGVRMDGRFSP----- 235

Query: 994  PATVGRTGYS----SFNIGPNSDS--VXXXXXXXXXXXXXXXRPLNPMYTATPNRYAXXX 1155
             ATVGR+ +S     F +G N +                     L+P Y    +RY    
Sbjct: 236  -ATVGRSNFSPFGPGFGMGLNYEQGLSPSYGGNSNLSSNLGYGRLSPSYNGNSSRY-DSP 293

Query: 1156 XXXXXXXXXNASVLNSTNSNMWGNGNQNYTNNAPNSTSFLSQG------NNFGSFGAIW- 1314
                     N+SVLNS    +WGNG  N+++N+ NS+SFL  G       +FGS GA+W 
Sbjct: 294  IGYNGGNVGNSSVLNSPARTLWGNGTINHSSNSTNSSSFLGSGTGNPGIGSFGSIGALWG 353

Query: 1315 ANPNSSNGVNAIGYGRKSGSSIAA------------GSYDD--GGGSFYADSTWRSSSRD 1452
            ++ +S  G   IGYGR SG+S+A             G Y D     S Y DS WRSS   
Sbjct: 354  SSASSGQGGGGIGYGRNSGTSVAPVSSHTASNDGYNGPYGDIYENISLYGDSAWRSS--P 411

Query: 1453 VEVXXXXXXXXXXXXXXXDDIQKKPVGY--------SVANRGIAA 1563
            +E+               D + K   GY          ANRGIAA
Sbjct: 412  LELEGSGSFGFGLGNAASDVVTKNSAGYVGGYSVASRQANRGIAA 456


>ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
            gi|355483302|gb|AES64505.1| RNA-binding protein, putative
            [Medicago truncatula]
          Length = 522

 Score =  421 bits (1083), Expect = e-115
 Identities = 239/455 (52%), Positives = 296/455 (65%), Gaps = 55/455 (12%)
 Frame = +1

Query: 259  YPYLNYKQPSSF*MEIEPGKLFIGGISWDTNEERLRDYFQTFGEVIEAVIMKDRTTGRAR 438
            Y Y+     S+  +E++PGKLFIGGISWDTNE+RLR YFQ FG+V+EAVIMKDRTTGRAR
Sbjct: 27   YIYIFIFFQSTCRVEMDPGKLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRAR 86

Query: 439  GFGFIVFSDPTVAERVVKEKHIIDGRAVEAKKAVPRDDQQNRSNGNGSSVQGSPGPT--R 612
            GFGF+VF+DP+VAERVV EKH+IDGR VEAKKAVPRDDQ   +  N SS  GSP PT  R
Sbjct: 87   GFGFVVFADPSVAERVVMEKHVIDGRTVEAKKAVPRDDQNVFTRSNSSS-HGSPAPTPIR 145

Query: 613  TKKIFVGGLASTVTESEFKNYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVL 792
            TKKIFVGGLASTVTES+FKNYF+QFGT TDVVVMYDHNTQRPRGFGFITYDSEE+VEKVL
Sbjct: 146  TKKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVL 205

Query: 793  LKTFHELNGKMVEVKRAVPKDSSPGANRSP---YSYG-LSRVSSYFSGYGQGFNPSSLGG 960
             KTFHELNGKMVEVKRAVPKD SP  +R     +SYG +SRV S+ +G+ QG+NPS +GG
Sbjct: 206  HKTFHELNGKMVEVKRAVPKDLSPSPSRGQLGGFSYGTMSRVGSFSNGFAQGYNPSLIGG 265

Query: 961  YGRFSPSPGPGPATVGRTGYS----SFNIGPNSD-SVXXXXXXXXXXXXXXXRPLNPMYT 1125
            +G         PA VGR+GYS    S+  G N +  +               R L+  Y+
Sbjct: 266  HG-LRLDGRLSPANVGRSGYSLFSPSYGTGLNFEPPLNQNENENFTSNFIMGRALSSPYS 324

Query: 1126 ATPNRYAXXXXXXXXXXXXNASVLNSTNSNMWGNGNQNYTNNAPNSTSFLSQGN------ 1287
            A+P+RY             N+S ++STN ++WGNGN NY NN  +S +FL  G+      
Sbjct: 325  ASPSRYNNAMAYAAGSNVGNSSAISSTNQSLWGNGNLNYANNPASSDAFLGYGSENSSIG 384

Query: 1288 NFGSFGAIWA----------------NPNSSN--------GVNAIGYGRKSGSSIAA--- 1386
            +FG+ G++W+                  +S N        G  A+GYG+ S S++ +   
Sbjct: 385  SFGNIGSLWSTSVGAANQAGTIGSGYGKSSLNYRLGDVILGSKAVGYGKNSESNVESDSS 444

Query: 1387 -----GSYDDG------GGSFYADSTWRSSSRDVE 1458
                 GSY +        G FY D TWR ++ ++E
Sbjct: 445  YAFSNGSYGEAYKSTFEAGPFYQDHTWRPTTSELE 479


>ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
            communis] gi|223528341|gb|EEF30383.1| Heterogeneous
            nuclear ribonucleoprotein 27C, putative [Ricinus
            communis]
          Length = 484

 Score =  414 bits (1065), Expect = e-113
 Identities = 232/443 (52%), Positives = 288/443 (65%), Gaps = 58/443 (13%)
 Frame = +1

Query: 298  MEIEPGKLFIGGISWDTNEERLRDYFQTFGEVIEAVIMKDRTTGRARGFGFIVFSDPTVA 477
            M+ + GKLFIGGISWDTNEERL++YF +FGEV+EAVIMKDRTTGRARGFGF+VF+D  VA
Sbjct: 1    MQSDNGKLFIGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVA 60

Query: 478  ERVVKEKHIIDGRAVEAKKAVPRDDQQNRSNGNGSSVQGSPGPTRTKKIFVGGLASTVTE 657
            ERV+ EKH IDGR VEAKKAVPRDDQ   +   GSS+ GSPGP RT+KIFVGGLASTVTE
Sbjct: 61   ERVIMEKHNIDGRMVEAKKAVPRDDQNILNRSTGSSIHGSPGPGRTRKIFVGGLASTVTE 120

Query: 658  SEFKNYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLKTFHELNGKMVEVK 837
            ++F+ YFEQ+GT TDVVVMYDHNTQRPRGFGFITYDSEE+V+KVL+KTFHELNGKMVEVK
Sbjct: 121  TDFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVK 180

Query: 838  RAVPKDSSPGANRSP---YSYGLSRVSSYFSGYGQGFNPSSLGGY-----GRFSPSPGPG 993
            RAVPK+ SPG +RSP   Y+YGLSRV+S+ +GY QG+ PS++GGY     GRFSP  G  
Sbjct: 181  RAVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYTPSAVGGYGLRMDGRFSPVAG-- 238

Query: 994  PATVGRTGY----SSFNIGPNSD---SVXXXXXXXXXXXXXXXRPLNPMYTATPNRYAXX 1152
                GR+G+    S + +G N +   S                R ++P Y    NR+A  
Sbjct: 239  ----GRSGFPPFGSGYGMGMNFEPAFSPSYGGNANFSSNLSYGRGMSPYYIGNTNRFA-N 293

Query: 1153 XXXXXXXXXXNASVLNSTNSNMWGNGNQNYTNNAPNSTSFLSQ------GNNFGSFGAIW 1314
                      N+S  +S   N+WGNG  NY +++ +S +++        GNNFG+    W
Sbjct: 294  PTGYDGGNGGNSSFFSSVTRNLWGNGGLNYNSSSASSNTYMGSGSGSIGGNNFGNSAVNW 353

Query: 1315 AN---------PNSSN---------GVNAI-----GYGRKSGSSIAA--------GSYDD 1401
             +          N+SN         G N+      GYGR S +++A         GS+D 
Sbjct: 354  GSSTLAAHGGGSNASNNNLNFGYGGGENSFSLGTGGYGRNSVNNLATTSSYAASNGSFDG 413

Query: 1402 ------GGGSFYADSTWRSSSRD 1452
                  GGGS Y D TWRSS+ +
Sbjct: 414  TFGDLYGGGSDYGDPTWRSSNSE 436


>ref|XP_002308799.1| predicted protein [Populus trichocarpa] gi|222854775|gb|EEE92322.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  413 bits (1061), Expect = e-113
 Identities = 246/487 (50%), Positives = 301/487 (61%), Gaps = 65/487 (13%)
 Frame = +1

Query: 298  MEIEPGKLFIGGISWDTNEERLRDYFQTFGEVIEAVIMKDRTTGRARGFGFIVFSDPTVA 477
            ME+E GKLFIGGISWDTNE+RL++YF+ FGEV+EAVIMKDR TGRARGFGF+VF+DP VA
Sbjct: 1    MEMELGKLFIGGISWDTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVA 60

Query: 478  ERVVKEKHIIDGRAVEAKKAVPRDDQQNRSNGNGSSVQGSPGPTRTKKIFVGGLASTVTE 657
            ERVV EKH+IDGR VEAKKAVPR+DQ N  N N SSV GSPGP RTKKIFVGGLASTVTE
Sbjct: 61   ERVVMEKHLIDGRNVEAKKAVPREDQ-NTLNKNSSSVNGSPGPARTKKIFVGGLASTVTE 119

Query: 658  SEFKNYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLKTFHELNGKMVEVK 837
            S+F+ YF+QFG  TDVVVMYDHNTQRPRGFGFITYDSEE+V++VL KTFHELNGKMVEVK
Sbjct: 120  SDFRKYFDQFGVITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVK 179

Query: 838  RAVPKDSSPGANRSP---YSYGLSRVSSYFSGYGQGFNPSSLGGY-----GRFSPSPGPG 993
            RAVPK+ SPG  R+    ++Y  SRVSS+ +GY QG+NPS +GGY     GRFS      
Sbjct: 180  RAVPKELSPGPARNQLGGFNYSPSRVSSFLNGYTQGYNPSFVGGYGVRMDGRFS------ 233

Query: 994  PATVGRTGYSSF----NIGPNSDSV--XXXXXXXXXXXXXXXRPLNPMYTATPNRYAXXX 1155
            P T GR+ +S F     +G N + V                   ++P Y+   +RY+   
Sbjct: 234  PVTAGRSNFSPFGSGYGMGLNFEQVLNPVYGGNSNISSNAGYGRVSPSYSGNASRYS-NP 292

Query: 1156 XXXXXXXXXNASVLNSTNSNMWGNGNQNYTNNAPNSTSFLSQG------NNFGSFGAIWA 1317
                     ++SVLN    ++WGNG+ N+ +N  NS+SF+S G       +F S GA+W 
Sbjct: 293  IGFSGGNGGSSSVLNPIAHSLWGNGSINHASNTTNSSSFMSSGTGSSGMGSFSSMGALWG 352

Query: 1318 NP------------NSSN----------GVNAIGYGRKSGSSIAA--------GSYDDG- 1404
            +             NSSN          G+  +GYGR S + +A         G YD   
Sbjct: 353  SSANSEQGGGVRAVNSSNLSFGGGDFDIGLEGVGYGRNSRTGVAPASSHAASNGGYDGAY 412

Query: 1405 -----GGSFYADSTWRSSSRDVEVXXXXXXXXXXXXXXXDDIQKKPV-----GYSVA--- 1545
                  GS Y D+TW+SS  +++V                D+  K       GYSVA   
Sbjct: 413  ADFYEKGSLYGDNTWQSSPSELDV---SGSFGFGLGNATSDVMTKNSAGYVGGYSVANRQ 469

Query: 1546 -NRGIAA 1563
             NRGIAA
Sbjct: 470  SNRGIAA 476


>ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
          Length = 478

 Score =  406 bits (1044), Expect = e-111
 Identities = 243/489 (49%), Positives = 293/489 (59%), Gaps = 67/489 (13%)
 Frame = +1

Query: 298  MEIEPGKLFIGGISWDTNEERLRDYFQTFGEVIEAVIMKDRTTGRARGFGFIVFSDPTVA 477
            M+ + GKLFIGGISWDTNE+RL+DYF  +GEV+EAVIMKDRTTGRARGFGF+VF+DP VA
Sbjct: 1    MQSDLGKLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVA 60

Query: 478  ERVVKEKHIIDGRAVEAKKAVPRDDQQNRSNGNGSSVQGSPGPTRTKKIFVGGLASTVTE 657
            ERV+KEKH IDGR VEAKKAVP+DDQ   S  +GS + GSPGP RT+KIFVGGLASTVTE
Sbjct: 61   ERVIKEKHNIDGRMVEAKKAVPKDDQSILSRNSGS-IHGSPGPGRTRKIFVGGLASTVTE 119

Query: 658  SEFKNYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLKTFHELNGKMVEVK 837
            S+FK YF+QFG  TDVVVMYDHNTQRPRGFGFITY+SEE+V+KVLLKTFHELNGKMVEVK
Sbjct: 120  SDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVK 179

Query: 838  RAVPKDSSPGANRSP---YSYGLSRVSSYFSGYGQGFNPSSLGGY-----GRFSPSPGPG 993
            RAVPK+ SPG  RS    ++YGLSRV+S+ S Y QG+ PS++GGY     GRFSP  G  
Sbjct: 180  RAVPKELSPGPIRSQLGGFNYGLSRVNSFLSAYNQGYAPSTVGGYGVRMDGRFSPIAG-- 237

Query: 994  PATVGRTGY----SSFNIGPNSD---SVXXXXXXXXXXXXXXXRPLNPMYTATPNRYAXX 1152
                GR+G+    S + +G N +   S                R LNP Y    NR+   
Sbjct: 238  ----GRSGFPPFGSGYGMGMNFEPGLSQSYGGSANFNNNLNYGRGLNPYYIGNTNRF-NS 292

Query: 1153 XXXXXXXXXXNASVLNSTNSNMWGNGNQNYTNNAPNSTSFLSQ------GNNFGSFGAIW 1314
                      N+S  +S   N+WGNG  N+  N+  S++F         G  FG+ G  W
Sbjct: 293  TIGYDGGNGGNSSFFSSATRNLWGNGGLNFGTNSATSSAFTGSASGTTGGGAFGNSGTSW 352

Query: 1315 ANP-----------------------NSSNGVNAIGYGRKSGSSIAAGS--------YDD 1401
             +                        +SS G+   GYGR SG+S+A  S        YD 
Sbjct: 353  GSSLISAQGGGSNISSNSGNLGYGGGDSSYGLGVGGYGRNSGTSVAPTSSYAASNSGYDG 412

Query: 1402 ------GGGSFYADSTWRSSSRDVEVXXXXXXXXXXXXXXXDDIQKKPV-----GYSV-- 1542
                   GGS Y DSTWR S+ + +                 D+  K       GYSV  
Sbjct: 413  ALAEFYSGGSVYGDSTWRPSNAERD---GSGSFGYGLGNAASDVPAKSSPGYVGGYSVTK 469

Query: 1543 --ANRGIAA 1563
              +NRGIAA
Sbjct: 470  RQSNRGIAA 478


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