BLASTX nr result

ID: Atractylodes22_contig00005307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005307
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93613.1| unknown [Populus trichocarpa]                           80   7e-27
ref|XP_002305244.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-25
ref|XP_002273113.2| PREDICTED: uncharacterized membrane protein ...    78   4e-24
ref|XP_002865917.1| hypothetical protein ARALYDRAFT_918304 [Arab...    79   5e-24
ref|NP_200067.1| uncharacterized protein [Arabidopsis thaliana] ...    79   5e-24

>gb|ABK93613.1| unknown [Populus trichocarpa]
          Length = 269

 Score = 80.5 bits (197), Expect(2) = 7e-27
 Identities = 37/44 (84%), Positives = 42/44 (95%)
 Frame = +3

Query: 3   EVMAMILMQVFFTVVGASGNVWNVINTAPSIFLFALIQLAVHLA 134
           E +A+ILMQVFF VVGASGNVWNVINTAPSIFLFAL+Q+A+HLA
Sbjct: 151 EALALILMQVFFAVVGASGNVWNVINTAPSIFLFALVQIAIHLA 194



 Score = 65.1 bits (157), Expect(2) = 7e-27
 Identities = 32/50 (64%), Positives = 33/50 (66%)
 Frame = +2

Query: 230 NVGGPTTACGMATAKGWSSLVVPXXXXXXXXXXXXXXXXVAFGAKVLQYM 379
           NVGGPTTACGMATAKGWSSLVVP                +AFGA VLQYM
Sbjct: 217 NVGGPTTACGMATAKGWSSLVVPGILAGIFGIAIATFLGIAFGANVLQYM 266


>ref|XP_002305244.1| predicted protein [Populus trichocarpa] gi|222848208|gb|EEE85755.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 80.5 bits (197), Expect(2) = 2e-25
 Identities = 37/44 (84%), Positives = 42/44 (95%)
 Frame = +3

Query: 3   EVMAMILMQVFFTVVGASGNVWNVINTAPSIFLFALIQLAVHLA 134
           E +A+ILMQVFF VVGASGNVWNVINTAPSIFLFAL+Q+A+HLA
Sbjct: 264 EALALILMQVFFAVVGASGNVWNVINTAPSIFLFALVQIAIHLA 307



 Score = 60.5 bits (145), Expect(2) = 2e-25
 Identities = 30/48 (62%), Positives = 31/48 (64%)
 Frame = +2

Query: 230 NVGGPTTACGMATAKGWSSLVVPXXXXXXXXXXXXXXXXVAFGAKVLQ 373
           NVGGPTTACGMATAKGWSSLVVP                +AFGA VLQ
Sbjct: 330 NVGGPTTACGMATAKGWSSLVVPGILAGIFGIAIATFLGIAFGANVLQ 377


>ref|XP_002273113.2| PREDICTED: uncharacterized membrane protein yjcL-like [Vitis
           vinifera] gi|302143806|emb|CBI22667.3| unnamed protein
           product [Vitis vinifera]
          Length = 449

 Score = 77.8 bits (190), Expect(2) = 4e-24
 Identities = 37/44 (84%), Positives = 42/44 (95%)
 Frame = +3

Query: 3   EVMAMILMQVFFTVVGASGNVWNVINTAPSIFLFALIQLAVHLA 134
           E MAMILMQVFFTVVGASGN+ NV+NTAPSIF+FAL+Q+AVHLA
Sbjct: 334 ETMAMILMQVFFTVVGASGNIGNVMNTAPSIFMFALVQIAVHLA 377



 Score = 58.5 bits (140), Expect(2) = 4e-24
 Identities = 28/50 (56%), Positives = 31/50 (62%)
 Frame = +2

Query: 230 NVGGPTTACGMATAKGWSSLVVPXXXXXXXXXXXXXXXXVAFGAKVLQYM 379
           NVGGPTTACGMATAKGWSSLVVP                + FG  VL++M
Sbjct: 400 NVGGPTTACGMATAKGWSSLVVPGILAGIFGIAIATFLGIVFGVTVLKFM 449


>ref|XP_002865917.1| hypothetical protein ARALYDRAFT_918304 [Arabidopsis lyrata subsp.
           lyrata] gi|297311752|gb|EFH42176.1| hypothetical protein
           ARALYDRAFT_918304 [Arabidopsis lyrata subsp. lyrata]
          Length = 464

 Score = 78.6 bits (192), Expect(2) = 5e-24
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = +3

Query: 3   EVMAMILMQVFFTVVGASGNVWNVINTAPSIFLFALIQLAVHLA 134
           E MA+ILMQVFFTVVGASGN+W+VINTAPSIFLFAL+Q+  HLA
Sbjct: 349 EAMALILMQVFFTVVGASGNIWSVINTAPSIFLFALVQIGTHLA 392



 Score = 57.4 bits (137), Expect(2) = 5e-24
 Identities = 27/50 (54%), Positives = 32/50 (64%)
 Frame = +2

Query: 230 NVGGPTTACGMATAKGWSSLVVPXXXXXXXXXXXXXXXXVAFGAKVLQYM 379
           NVGGPTTA GMATAKGW+SL+VP                +AFG KVL++M
Sbjct: 415 NVGGPTTAAGMATAKGWNSLIVPGILAGIFGIAIATFLGIAFGVKVLKFM 464


>ref|NP_200067.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8953709|dbj|BAA98072.1| unnamed protein product
           [Arabidopsis thaliana] gi|17064942|gb|AAL32625.1|
           Unknown protein [Arabidopsis thaliana]
           gi|23397234|gb|AAN31899.1| unknown protein [Arabidopsis
           thaliana] gi|24899799|gb|AAN65114.1| Unknown protein
           [Arabidopsis thaliana] gi|332008845|gb|AED96228.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 461

 Score = 78.6 bits (192), Expect(2) = 5e-24
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = +3

Query: 3   EVMAMILMQVFFTVVGASGNVWNVINTAPSIFLFALIQLAVHLA 134
           E MA+ILMQVFFTVVGASGN+W+VINTAPSIFLFAL+Q+  HLA
Sbjct: 346 EAMALILMQVFFTVVGASGNIWSVINTAPSIFLFALVQIGTHLA 389



 Score = 57.4 bits (137), Expect(2) = 5e-24
 Identities = 27/50 (54%), Positives = 32/50 (64%)
 Frame = +2

Query: 230 NVGGPTTACGMATAKGWSSLVVPXXXXXXXXXXXXXXXXVAFGAKVLQYM 379
           NVGGPTTA GMATAKGW+SL+VP                +AFG KVL++M
Sbjct: 412 NVGGPTTAAGMATAKGWNSLIVPGILAGIFGIAIATFIGIAFGVKVLKFM 461


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