BLASTX nr result

ID: Atractylodes22_contig00005203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005203
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus ...   154   7e-36
ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis v...   149   2e-34
emb|CBI19930.3| unnamed protein product [Vitis vinifera]              149   2e-34

>ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223540477|gb|EEF42044.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 373

 Score =  154 bits (389), Expect = 7e-36
 Identities = 80/131 (61%), Positives = 90/131 (68%)
 Frame = +3

Query: 3   CKNNMNNMVLSLAPKFTKLRVLILRQDKPQLDDNAVETIAKNCNXXXXXXXXXXXXXXXX 182
           CKN+MNN+VL LAPKFTKL  L+LRQDKPQL+DNAVE IA+ C+                
Sbjct: 88  CKNHMNNLVLWLAPKFTKLETLVLRQDKPQLEDNAVEAIARYCHDLEDLDL--------- 138

Query: 183 XXXXXXXXXXXXXXSKSFKLGDRSLYALARGCPNLIKLNISGCSAFSDAALEYLSGYCRK 362
                         SKSFKL D SLYALA GCPNL KLNISGC++FSD  LEYL+G+CRK
Sbjct: 139 --------------SKSFKLTDCSLYALAHGCPNLTKLNISGCTSFSDGGLEYLTGFCRK 184

Query: 363 LKILNLCGCVK 395
           LKILNLCGCVK
Sbjct: 185 LKILNLCGCVK 195


>ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|222856121|gb|EEE93668.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  154 bits (388), Expect = 9e-36
 Identities = 80/131 (61%), Positives = 90/131 (68%)
 Frame = +3

Query: 3   CKNNMNNMVLSLAPKFTKLRVLILRQDKPQLDDNAVETIAKNCNXXXXXXXXXXXXXXXX 182
           CKNNMNN+VLSLAPKFTKL+ L+LRQDKPQL+D+AVETIA  C+                
Sbjct: 78  CKNNMNNLVLSLAPKFTKLQTLVLRQDKPQLEDHAVETIASYCHDLQDLDL--------- 128

Query: 183 XXXXXXXXXXXXXXSKSFKLGDRSLYALARGCPNLIKLNISGCSAFSDAALEYLSGYCRK 362
                         SKSFKL D SLYALA GCPNL KLNISGC+AFSD  LEYL+ +C+K
Sbjct: 129 --------------SKSFKLSDLSLYALAHGCPNLTKLNISGCTAFSDDGLEYLTEFCQK 174

Query: 363 LKILNLCGCVK 395
           LK LNLCGCVK
Sbjct: 175 LKFLNLCGCVK 185


>ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|222843928|gb|EEE81475.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  154 bits (388), Expect = 9e-36
 Identities = 81/130 (62%), Positives = 90/130 (69%)
 Frame = +3

Query: 3   CKNNMNNMVLSLAPKFTKLRVLILRQDKPQLDDNAVETIAKNCNXXXXXXXXXXXXXXXX 182
           CKNNMNN+VLSLAPKFTKL+ L+LRQDKPQL+DNAVETIA  C+                
Sbjct: 73  CKNNMNNLVLSLAPKFTKLQTLVLRQDKPQLEDNAVETIASYCHDLQDLDL--------- 123

Query: 183 XXXXXXXXXXXXXXSKSFKLGDRSLYALARGCPNLIKLNISGCSAFSDAALEYLSGYCRK 362
                         SKSFKL D SLYALA G PNL KLNISGC+AFSD +LEYL+ +CRK
Sbjct: 124 --------------SKSFKLSDLSLYALAHGFPNLTKLNISGCTAFSDVSLEYLTEFCRK 169

Query: 363 LKILNLCGCV 392
           LKILNLCGCV
Sbjct: 170 LKILNLCGCV 179


>ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis vinifera]
          Length = 370

 Score =  149 bits (377), Expect = 2e-34
 Identities = 79/131 (60%), Positives = 88/131 (67%)
 Frame = +3

Query: 3   CKNNMNNMVLSLAPKFTKLRVLILRQDKPQLDDNAVETIAKNCNXXXXXXXXXXXXXXXX 182
           CKNNMNN+VLSLAPKFTKL+ L LRQDKPQL+D AVE IA  C+                
Sbjct: 85  CKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAVEIIANYCHDLQDLDL--------- 135

Query: 183 XXXXXXXXXXXXXXSKSFKLGDRSLYALARGCPNLIKLNISGCSAFSDAALEYLSGYCRK 362
                         SKSFKL D SLYALA GCPNL KLNISGC+AFSDAAL +L+ +CR+
Sbjct: 136 --------------SKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSFCRR 181

Query: 363 LKILNLCGCVK 395
           LKILNLCGC K
Sbjct: 182 LKILNLCGCGK 192


>emb|CBI19930.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  149 bits (377), Expect = 2e-34
 Identities = 79/131 (60%), Positives = 88/131 (67%)
 Frame = +3

Query: 3   CKNNMNNMVLSLAPKFTKLRVLILRQDKPQLDDNAVETIAKNCNXXXXXXXXXXXXXXXX 182
           CKNNMNN+VLSLAPKFTKL+ L LRQDKPQL+D AVE IA  C+                
Sbjct: 143 CKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAVEIIANYCHDLQDLDL--------- 193

Query: 183 XXXXXXXXXXXXXXSKSFKLGDRSLYALARGCPNLIKLNISGCSAFSDAALEYLSGYCRK 362
                         SKSFKL D SLYALA GCPNL KLNISGC+AFSDAAL +L+ +CR+
Sbjct: 194 --------------SKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSFCRR 239

Query: 363 LKILNLCGCVK 395
           LKILNLCGC K
Sbjct: 240 LKILNLCGCGK 250


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