BLASTX nr result

ID: Atractylodes22_contig00005188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005188
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...   139   2e-31
emb|CBI15364.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding...   135   4e-30
ref|XP_003595690.1| WD repeat-containing protein [Medicago trunc...   130   1e-28
ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communi...   127   7e-28

>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
           protein 1-like [Vitis vinifera]
          Length = 965

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/90 (72%), Positives = 79/90 (87%)
 Frame = +2

Query: 68  MKIRSMKLREAHKNNGVSSYCTILWDLTAEHIVTASSSDTSISIHDALLPSNTPTFLRNH 247
           MK RS+KLREAHK++G +S+C+ILWDL A+H++T+SS+D SI IHD LLPSN+P  LR+H
Sbjct: 1   MKGRSLKLREAHKSSGAASFCSILWDLRAQHLLTSSSNDLSICIHDPLLPSNSPQILRHH 60

Query: 248 RDGVTTLAISPNSTCLASGSTDRSVKLYKF 337
           RDGVT LA+SPNSTCLASGS D SVKLYKF
Sbjct: 61  RDGVTALALSPNSTCLASGSIDHSVKLYKF 90


>emb|CBI15364.3| unnamed protein product [Vitis vinifera]
          Length = 1427

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/90 (72%), Positives = 79/90 (87%)
 Frame = +2

Query: 68  MKIRSMKLREAHKNNGVSSYCTILWDLTAEHIVTASSSDTSISIHDALLPSNTPTFLRNH 247
           MK RS+KLREAHK++G +S+C+ILWDL A+H++T+SS+D SI IHD LLPSN+P  LR+H
Sbjct: 1   MKGRSLKLREAHKSSGAASFCSILWDLRAQHLLTSSSNDLSICIHDPLLPSNSPQILRHH 60

Query: 248 RDGVTTLAISPNSTCLASGSTDRSVKLYKF 337
           RDGVT LA+SPNSTCLASGS D SVKLYKF
Sbjct: 61  RDGVTALALSPNSTCLASGSIDHSVKLYKF 90


>ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Cucumis sativus] gi|449477125|ref|XP_004154937.1|
           PREDICTED: WD repeat and HMG-box DNA-binding protein
           1-like [Cucumis sativus]
          Length = 962

 Score =  135 bits (339), Expect = 4e-30
 Identities = 66/92 (71%), Positives = 78/92 (84%), Gaps = 2/92 (2%)
 Frame = +2

Query: 68  MKIRSMKLREAHK--NNGVSSYCTILWDLTAEHIVTASSSDTSISIHDALLPSNTPTFLR 241
           MKIRS+KLREAHK  +NG  S+C++LWD  A HIVTASSS+++ISIHD+LLPS TP  + 
Sbjct: 1   MKIRSVKLREAHKAASNGKPSFCSVLWDQQAYHIVTASSSESAISIHDSLLPSTTPKIIH 60

Query: 242 NHRDGVTTLAISPNSTCLASGSTDRSVKLYKF 337
            HR+GVT LA+SPNSTCLASGS DRSVKLYKF
Sbjct: 61  QHREGVTALALSPNSTCLASGSMDRSVKLYKF 92


>ref|XP_003595690.1| WD repeat-containing protein [Medicago truncatula]
           gi|355484738|gb|AES65941.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 991

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/91 (68%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
 Frame = +2

Query: 68  MKIRSMKLREAH-KNNGVSSYCTILWDLTAEHIVTASSSDTSISIHDALLPSNTPTFLRN 244
           MK+R MK+REAH +  G +S+C+++WD  AEH+VTASSSD S+SIH+ LLPS  P  LR+
Sbjct: 1   MKVRLMKMREAHTQKGGRASFCSLVWDQKAEHLVTASSSDVSVSIHNPLLPSTAPKILRH 60

Query: 245 HRDGVTTLAISPNSTCLASGSTDRSVKLYKF 337
           HRDGVT LA+SPNSTCLASGS D SVKLYKF
Sbjct: 61  HRDGVTALALSPNSTCLASGSVDHSVKLYKF 91


>ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543104|gb|EEF44638.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 775

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/92 (69%), Positives = 74/92 (80%), Gaps = 2/92 (2%)
 Frame = +2

Query: 68  MKIRSMKLREAHKNNGVS--SYCTILWDLTAEHIVTASSSDTSISIHDALLPSNTPTFLR 241
           MKIR++KLREAHK+NG    S+C+ILWD    H+VTASSSD +I IHD LL SN P  LR
Sbjct: 1   MKIRTLKLREAHKSNGGHGPSFCSILWDHQTRHLVTASSSDPTICIHDPLLLSNGPRILR 60

Query: 242 NHRDGVTTLAISPNSTCLASGSTDRSVKLYKF 337
           +HRDGVT L++SPNSTCLASGS D SVKLYKF
Sbjct: 61  HHRDGVTALSLSPNSTCLASGSIDHSVKLYKF 92


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