BLASTX nr result

ID: Atractylodes22_contig00005098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005098
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    80   7e-13
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    78   3e-12
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    71   3e-10
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    67   6e-09
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...    60   8e-07

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 73/223 (32%), Positives = 109/223 (48%), Gaps = 6/223 (2%)
 Frame = -1

Query: 820 IIIWGKT--IGFCRPGDDSWTRINGWEGHLFDITYHAMRKRLYVVATMGSIYECDILSGG 647
           ++I  +T  +  CR  DDSWT +   + +  D+ +H  R   Y V   GSI  CD+ SG 
Sbjct: 180 VVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFH--RGLFYAVNKYGSIAVCDV-SGS 236

Query: 646 SRPLSLCRLSTFPGKEFGCSSFTSAYLLEWGYNSLLMVAR--ERYYYNKHDHEYLRYGPY 473
           S  +S+  +     ++FG       YL+E G   LL+V R  +  Y  + D   L    Y
Sbjct: 237 SPRVSIIEMP----QQFGGD---LQYLVESG-EELLLVTRYLDLTYDVEPDQTSL---IY 285

Query: 472 TTNKFQCFVLGLDEWKWSEQLVSLGGKAVFLGFNSSFAINATG--GVKPDCIYFTDDLYE 299
            T +FQ   L L   +W E + SLG +A+FLG N S ++++    G K +CIY+TDD  E
Sbjct: 286 RTTRFQVCRLDLKAPRW-EVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE 344

Query: 298 PYRDLPXXXXXXXXVYHMSDGRIEAILDSQESNVFRGSPPLWL 170
              D          ++++ DG IE +  S      R  PPLW+
Sbjct: 345 DNYD-GIGGEQDLGIFNLEDGSIEPLPCSHFR--IRWPPPLWV 384


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 5/222 (2%)
 Frame = -1

Query: 820 IIIWGKT--IGFCRPGDDSWTRINGWEGHLFDITYHAMRKRLYVVATMGSIYECDILSGG 647
           ++I  +T  +  CR  DDSWT +   + +  D+ +H  R   Y V   GSI  CD+ SG 
Sbjct: 180 VVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFH--RGLFYAVNKYGSIAVCDV-SGS 236

Query: 646 SRPLSLCRLSTFPGKEFGCSSFTSAYLLEWGYNSLLMVARERYYYNKHDHEYLRYG-PYT 470
           S  +S+  +     ++FG       YL+E G   LL+    RY    +D E  +    Y 
Sbjct: 237 SPRVSIIEMP----QQFGGD---LQYLVESGEELLLVT---RYLDLTYDVEXDQTSLIYR 286

Query: 469 TNKFQCFVLGLDEWKWSEQLVSLGGKAVFLGFNSSFAINATG--GVKPDCIYFTDDLYEP 296
           T +FQ   L     +W E + SLG +A+FLG N S ++++    G K +CIY+TDD  E 
Sbjct: 287 TTRFQVCRLDSKAPRW-EVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSED 345

Query: 295 YRDLPXXXXXXXXVYHMSDGRIEAILDSQESNVFRGSPPLWL 170
             D          ++++ DG IE +  S      R  PPLW+
Sbjct: 346 NYD-GIGGEQDLGIFNLEDGSIEPLPCSHFR--IRWPPPLWV 384


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 4/214 (1%)
 Frame = -1

Query: 799 IGFCRPGDDSWTRINGWEGHLFDITYHAMRKRLYVVATMGSIYECDILSGGSRPLSLCRL 620
           + +C+ GD+ W  +        D+ Y       Y V   G I  CD+ +G S  +S    
Sbjct: 193 LAYCKNGDECWNIVENSRSFSEDVIY--FNGLFYAVNKAGQIVVCDV-NGNSPKVSFIET 249

Query: 619 STFPGKEFGCSSFTSAYLLEWGYNSLLMVARERYYYNKHDHEYLRYGPYTTNKFQCFVLG 440
               G +         YL+  G + LL+V R    Y   D E+  +  Y T +F+ F L 
Sbjct: 250 PRQIGGDM-------QYLVSSG-DGLLLVTR----YLDLDVEFDIF-IYKTARFEVFKLD 296

Query: 439 LDEWKWSEQLVSLGGKAVFLGFNSSFAINATG--GVKPDCIYFTDDLYEPYRDLPXXXXX 266
           L+  +W E++ SLG   +F+G NSS A++A+G  G   DCIY+TDD Y            
Sbjct: 297 LNGPRW-ERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDD-YSANNYDGHIGEH 354

Query: 265 XXXVYHMSDGRIEAILDSQESNVFR--GSPPLWL 170
              ++ +SDG IE +     ++  R    PPLW+
Sbjct: 355 DLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWI 388


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 7/225 (3%)
 Frame = -1

Query: 823 VIIIWGKT--IGFCRPGDDSWTRINGWEGHLFDITYHAMRKRLYVVATMGSIYECDILSG 650
           VI I  +T  + +CR GD SW+ +        D+ +  +    Y V   G I  CDI S 
Sbjct: 182 VIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIF--VNGMFYAVNKAGQIVICDISSD 239

Query: 649 GSRPLSLCRLSTFPGKEFGCSSFTSAYLLEWGYNSLLMVARERYYYNKHDHEYLR-YGPY 473
             R +S        G +         YL+  G + LL+V R      + DH  +  +  Y
Sbjct: 240 SPR-VSFMETPRQAGGDM-------QYLVNSG-DELLLVTRYLDLEYEFDHPDMEPHLIY 290

Query: 472 TTNKFQCFVLGLDEWKWSEQLVSLGGKAVFLGFNSSFAINAT--GGVKPDCIYFTDDLYE 299
            T +F+ F L  +  +W  ++ +LG KA+F+G NSS +++AT   G   +CIY+TDD  +
Sbjct: 291 RTIRFEVFRLDWNGPQWL-RMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLD 349

Query: 298 PYRDLPXXXXXXXXVYHMSDGRIEAI--LDSQESNVFRGSPPLWL 170
              D          ++ + D  IE +       ++  + SPPLW+
Sbjct: 350 ANYD-GHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWV 393


>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 6/206 (2%)
 Frame = -1

Query: 820 IIIWG--KTIGFCRPGDDSWTRINGWEGHLFDITYHAMRKRLYVVATMGSIYECDILSGG 647
           ++I+G  + + FCR GD +WT        + D T    R+    +   G ++  D   G 
Sbjct: 176 VVIYGVNENLAFCRSGDAAWT--------VIDETTSPPRRYKDALFRAGKLFAVDQTGGI 227

Query: 646 SRPLSLCRLSTF--PGKEFGCSSFTSAYLLEWGYNSLLMVARERYYYNKHDHEYLRYGPY 473
           S       +  F  P      + +   YL  +    LL+V R    Y K   +Y     Y
Sbjct: 228 SILTEENTMIRFADPPLVSSRTGYKQWYLASYSEEELLIVCR----YRKVVPDY----EY 279

Query: 472 TTNKFQCFVLGLDEWKWSEQLVSLGGKAVFLGFNSSFAINAT--GGVKPDCIYFTDDLYE 299
            T +F+ + L    WK  E   SLG K +FLG N S +I+A      K +CIYFTDD   
Sbjct: 280 KTERFEIYKLDDGGWKKKE---SLGDKMLFLGGNGSLSISALDYSKCKGNCIYFTDDYIR 336

Query: 298 PYRDLPXXXXXXXXVYHMSDGRIEAI 221
             +D          +Y + DG I ++
Sbjct: 337 LCKDY-VWEGHDYGIYDIEDGNIRSL 361


Top