BLASTX nr result

ID: Atractylodes22_contig00005097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005097
         (1378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   139   2e-30
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   137   7e-30
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   120   8e-25
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   117   7e-24
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...   114   8e-23

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  139 bits (350), Expect = 2e-30
 Identities = 127/400 (31%), Positives = 191/400 (47%), Gaps = 23/400 (5%)
 Frame = -3

Query: 1373 LLPEILNEIAGNFEFYEDFINFLCVCSSWRSSATTSKRSIQYLPSRFPLLMLAESNTEEE 1194
            L PE+L+ IA  F+ Y D++ F  VC +WR+S     ++  +LP++ P LML +S     
Sbjct: 7    LHPELLDFIAKKFKIYTDYVRFRAVCHNWRASV---PKTPHHLPTQLPWLMLPQSQPHHT 63

Query: 1193 ECPRFLLSIGGTMRKVQLPEA--HRQRCISAHGWLLTTGGAEFHAQLLHPLSRTQIDLPT 1020
              P F LS+      +QLPEA   R+R  S+HGWLL    A     LL+PL+R+++ LP 
Sbjct: 64   HRPFFSLSL-NKFHFLQLPEASHRRRRRGSSHGWLLILDEAP-EIFLLNPLTRSKVHLPP 121

Query: 1019 LYMF------------EELYFDQDEWMYYGQCMRKV--VFTSSNPLSS--RHNPSFRVII 888
            L  F             E          Y + ++K+   F     LSS   +   F  ++
Sbjct: 122  LSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVV 181

Query: 887  IWGKS--IGFCRLGDDSWTRINGWEGHLFDIAYHTMRKRLYVVATMGSIYECDILSDGSC 714
            I  ++  +  CR  DDSWT +   + +  D+ +H  R   Y V   GSI  CD+   GS 
Sbjct: 182  ILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFH--RGLFYAVNKYGSIAVCDV--SGSS 237

Query: 713  PLTLCRLSTFP-GKEFGCSSFTSAYLLEWGYNSLLMVVRERYYYKKHNHEYHRYG-PYST 540
            P    R+S     ++FG       YL+E G   LL+    RY    ++ E  +    Y T
Sbjct: 238  P----RVSIIEMPQQFGGD---LQYLVESGEELLLVT---RYLDLTYDVEPDQTSLIYRT 287

Query: 539  HKFLCFVLGLDDGKWSQLVSLGDKAVFLGFNSSFAINA-SSGGVKPDCIYFTDDLYEPSR 363
             +F    L L   +W  + SLGD+A+FLG N S ++++    G K +CIY+TDD  E + 
Sbjct: 288  TRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNY 347

Query: 362  DLPXXXXXXXXVYHMSDGRIEAIFDSQESNVFRGSPPLWL 243
            D          ++++ DG IE +  S      R  PPLW+
Sbjct: 348  D-GIGGEQDLGIFNLEDGSIEPLPCSHFR--IRWPPPLWV 384


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  137 bits (345), Expect = 7e-30
 Identities = 126/400 (31%), Positives = 190/400 (47%), Gaps = 23/400 (5%)
 Frame = -3

Query: 1373 LLPEILNEIAGNFEFYEDFINFLCVCSSWRSSATTSKRSIQYLPSRFPLLMLAESNTEEE 1194
            L PE+L+ IA  F+ Y D++ F  VC +WR+S     ++  +LP++ P LML +S     
Sbjct: 7    LHPELLDFIAKKFKIYTDYVRFRAVCHNWRASV---PKTPHHLPTQLPWLMLPQSQPHHT 63

Query: 1193 ECPRFLLSIGGTMRKVQLPEA--HRQRCISAHGWLLTTGGAEFHAQLLHPLSRTQIDLPT 1020
              P F LS+      +QLPEA   R+R  S+HGWLL    A     LL+PL+R+++ LP 
Sbjct: 64   HRPFFSLSL-NKFHFLQLPEASHRRRRRGSSHGWLLILDEAP-EIFLLNPLTRSKVHLPP 121

Query: 1019 LYMF------------EELYFDQDEWMYYGQCMRKV--VFTSSNPLSS--RHNPSFRVII 888
            L  F             E          Y + ++K+   F     LSS   +   F  ++
Sbjct: 122  LSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVV 181

Query: 887  IWGKS--IGFCRLGDDSWTRINGWEGHLFDIAYHTMRKRLYVVATMGSIYECDILSDGSC 714
            I  ++  +  CR  DDSWT +   + +  D+ +H  R   Y V   GSI  CD+   GS 
Sbjct: 182  ILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFH--RGLFYAVNKYGSIAVCDV--SGSS 237

Query: 713  PLTLCRLSTFP-GKEFGCSSFTSAYLLEWGYNSLLMVVRERYYYKKHNHEYHRYG-PYST 540
            P    R+S     ++FG       YL+E G   LL+    RY    ++ E  +    Y T
Sbjct: 238  P----RVSIIEMPQQFGGD---LQYLVESGEELLLVT---RYLDLTYDVEXDQTSLIYRT 287

Query: 539  HKFLCFVLGLDDGKWSQLVSLGDKAVFLGFNSSFAINA-SSGGVKPDCIYFTDDLYEPSR 363
             +F    L     +W  + SLGD+A+FLG N S ++++    G K +CIY+TDD  E + 
Sbjct: 288  TRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNY 347

Query: 362  DLPXXXXXXXXVYHMSDGRIEAIFDSQESNVFRGSPPLWL 243
            D          ++++ DG IE +  S      R  PPLW+
Sbjct: 348  D-GIGGEQDLGIFNLEDGSIEPLPCSHFR--IRWPPPLWV 384


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  120 bits (301), Expect = 8e-25
 Identities = 112/402 (27%), Positives = 184/402 (45%), Gaps = 25/402 (6%)
 Frame = -3

Query: 1373 LLPEILNEIAGNFEFYEDFINFLCVCSSWRSSATTSKRSIQYLPSRFPLLMLAESNTEEE 1194
            L PE++  I+     Y D+++F  VC +W+SS     ++  +LP + P L+L +S + + 
Sbjct: 8    LPPELIEIISKKITIYSDYLHFQAVCHAWKSSIP---KTPNHLPPQLPWLLLPQSQSNQS 64

Query: 1193 ECPRFLLSIGGTMRKVQLPEA-HRQR-CISAHGWLLTTGGAEFHAQLLHPLSRTQIDLPT 1020
                F          + LPEA HR++ C S+HGWL+    +     +++PL+R +I LP 
Sbjct: 65   SYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSP-SILVINPLTRRKIHLPA 123

Query: 1019 LYMFEELY-FDQD----EWMYYG----------QCMR----KVVFTSSNPLSSRHNPSFR 897
            +  F  +  FD      E++             + MR    K V  SS+PL  + +    
Sbjct: 124  ISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGDFFVA 183

Query: 896  VIIIWGKS-IGFCRLGDDSWTRINGWEGHLFDIAYHTMRKRLYVVATMGSIYECDILSDG 720
            + I+     + +C+ GD+ W  +        D+ Y       Y V   G I  CD+  +G
Sbjct: 184  MAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIY--FNGLFYAVNKAGQIVVCDV--NG 239

Query: 719  SCPLTLCRLSTFPGKEFGCSSFTSAYLLEWGYNSLLMVVRERYYYKKHNHEYHRYGPYST 540
            + P         P +  G       YL+  G + LL+V R    Y   + E+  +  Y T
Sbjct: 240  NSPKV--SFIETPRQIGG----DMQYLVSSG-DGLLLVTR----YLDLDVEFDIF-IYKT 287

Query: 539  HKFLCFVLGLDDGKWSQLVSLGDKAVFLGFNSSFAINASS-GGVKPDCIYFTDDLYEPSR 363
             +F  F L L+  +W ++ SLGD  +F+G NSS A++AS   G   DCIY+TDD Y  + 
Sbjct: 288  ARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDD-YSANN 346

Query: 362  DLPXXXXXXXXVYHMSDGRIEAI--FDSQESNVFRGSPPLWL 243
                       ++ +SDG IE +  +     +  +  PPLW+
Sbjct: 347  YDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWI 388


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  117 bits (293), Expect = 7e-24
 Identities = 112/408 (27%), Positives = 184/408 (45%), Gaps = 31/408 (7%)
 Frame = -3

Query: 1373 LLPEILNEIAGNFEFYEDFINFLCVCSSWRSSATTSKRSIQYLPSRFPLLMLAESNTEEE 1194
            L PE++  I+     Y D++    VC +WR S     ++  +LP + P LML +S ++  
Sbjct: 8    LPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIP---KTPNHLPPQLPWLMLPQSQSQSN 64

Query: 1193 ECPRFLLSIG-GTMRKVQLPEA--HRQRCISAHGWLLTTGGAEFHAQLLHPLSRTQIDLP 1023
            +  R   S+       + LPE    ++ C S+HGWL+          L++PL+R ++ LP
Sbjct: 65   QSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPT-ILLINPLTRAKLSLP 123

Query: 1022 TLYMFEEL--YFDQDEWMYYG------------------QCMRKVVFTSSNPLSSRHNPS 903
             L  F  +  +   D    Y                     +RKVV +SS PL   +   
Sbjct: 124  PLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSS-PLKDNN--- 179

Query: 902  FRVIIIWGKS--IGFCRLGDDSWTRINGWEGHLFDIAYHTMRKRLYVVATMGSIYECDIL 729
            F VI I  ++  + +CR GD SW+ +        D+ +  +    Y V   G I  CDI 
Sbjct: 180  FVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIF--VNGMFYAVNKAGQIVICDIS 237

Query: 728  SDGSCPLTLCRLSTFPGKEFGCSSFTSAYLLEWGYNSLLMVVRE---RYYYKKHNHEYHR 558
            SD S  ++        G +         YL+  G + LL+V R     Y +   + E H 
Sbjct: 238  SD-SPRVSFMETPRQAGGDM-------QYLVNSG-DELLLVTRYLDLEYEFDHPDMEPHL 288

Query: 557  YGPYSTHKFLCFVLGLDDGKWSQLVSLGDKAVFLGFNSSFAINASS-GGVKPDCIYFTDD 381
               Y T +F  F L  +  +W ++ +LGDKA+F+G NSS +++A+   G   +CIY+TDD
Sbjct: 289  I--YRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDD 346

Query: 380  LYEPSRDLPXXXXXXXXVYHMSDGRIEAI--FDSQESNVFRGSPPLWL 243
              + + D          ++ + D  IE +  +    ++  + SPPLW+
Sbjct: 347  YLDANYD-GHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWV 393


>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
            gi|223551313|gb|EEF52799.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 402

 Score =  114 bits (284), Expect = 8e-23
 Identities = 108/387 (27%), Positives = 176/387 (45%), Gaps = 26/387 (6%)
 Frame = -3

Query: 1376 DLLPEILNEIAGNFEFYEDFINFLCVCSSWRSSATTSKRSIQYLPSRFPLLMLAESNTEE 1197
            +L PE+L  IA     Y D++    VC SW+S+   +KR   +L  + P L+L       
Sbjct: 7    ELPPELLQVIADKHTNYVDYLVTRAVCGSWQSAI--AKRPHNHLLCQLPFLLLPYYQNNP 64

Query: 1196 EECPRFLLSIGGTMRKVQLPEAHRQRCI-SAHGWLLTTGGAEFHAQLLHPLSRTQIDLPT 1020
            +    + +S    +  ++LPEA+ +RC  S+HGWL+    +     LL+PL+R +I+LP 
Sbjct: 65   DRRGFYNIS-DDKIYVLELPEAYEKRCCGSSHGWLIMVEDSP-SIFLLNPLTRERIELPA 122

Query: 1019 LYMFE----ELYFDQDEWMYYGQCMR-----------KVVFTSSNPLSSRHNPSFRVIII 885
            L  F     ++ F+    +     MR           K + +S   L +    +F  ++I
Sbjct: 123  LSTFSIFPTDVVFENSRNLNENFIMREKFHIRDTFIVKAILSSDPSLDT----NFMAVVI 178

Query: 884  WG--KSIGFCRLGDDSWTRING-------WEGHLFDIAYHTMRKRLYVVATMGSIYECDI 732
            +G  +++ FCR GD +WT I+        ++  LF         +L+ V   G I    I
Sbjct: 179  YGVNENLAFCRSGDAAWTVIDETTSPPRRYKDALFRAG------KLFAVDQTGGI---SI 229

Query: 731  LSDGSCPLTLCRLSTFPGKEFGCSSFTSAYLLEWGYNSLLMVVRERYYYKKHNHEYHRYG 552
            L++ +   T+ R +  P      + +   YL  +    LL+V R R     + ++  R+ 
Sbjct: 230  LTEEN---TMIRFAD-PPLVSSRTGYKQWYLASYSEEELLIVCRYRKVVPDYEYKTERFE 285

Query: 551  PYSTHKFLCFVLGLDDGKWSQLVSLGDKAVFLGFNSSFAINA-SSGGVKPDCIYFTDDLY 375
             Y           LDDG W +  SLGDK +FLG N S +I+A      K +CIYFTDD  
Sbjct: 286  IYK----------LDDGGWKKKESLGDKMLFLGGNGSLSISALDYSKCKGNCIYFTDDYI 335

Query: 374  EPSRDLPXXXXXXXXVYHMSDGRIEAI 294
               +D          +Y + DG I ++
Sbjct: 336  RLCKDY-VWEGHDYGIYDIEDGNIRSL 361


Top