BLASTX nr result

ID: Atractylodes22_contig00005065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005065
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    62   4e-08
ref|XP_003594085.1| F-box family protein, partial [Medicago trun...    60   2e-07
ref|XP_003594084.1| F-box protein [Medicago truncatula] gi|35548...    60   2e-07
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncat...    59   3e-07

>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/60 (50%), Positives = 38/60 (63%)
 Frame = -2

Query: 229 VWVMKVYGAKDSWTKLVSVPYPTEPERGKGYLAPLFIANECKVLLKFGSKLVLYDAKNGS 50
           VW+MK YG ++SW KLVS+PY   PE    Y  P +I+   KVLL F   L+LYD +N S
Sbjct: 320 VWMMKDYGVRESWVKLVSIPYVPNPE-DFSYSGPYYISENGKVLLMFEFDLILYDPRNNS 378


>ref|XP_003594085.1| F-box family protein, partial [Medicago truncatula]
           gi|355483133|gb|AES64336.1| F-box family protein,
           partial [Medicago truncatula]
          Length = 595

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = -2

Query: 232 DVWVMKVYGAKDSWTKLVSVPYPTEPERGKGYLAPLFIANECKVLLKFGSKLVLYDAKNG 53
           DVW+MK YG  DSWTKL  +P+  +  R   +  PL+++ + +VLL   SKLV+Y+ ++G
Sbjct: 374 DVWLMKEYGNNDSWTKLFRLPHMKDHPRSWSHACPLYVSEDDQVLLDMTSKLVVYNYRDG 433

Query: 52  S 50
           +
Sbjct: 434 T 434


>ref|XP_003594084.1| F-box protein [Medicago truncatula] gi|355483132|gb|AES64335.1|
           F-box protein [Medicago truncatula]
          Length = 772

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = -2

Query: 232 DVWVMKVYGAKDSWTKLVSVPYPTEPERGKGYLAPLFIANECKVLLKFGSKLVLYDAKNG 53
           DVW+MK YG  DSWTKL  +P+  +  R   +  PL+++ + +VLL   SKLV+Y+ ++G
Sbjct: 96  DVWLMKEYGNNDSWTKLFRLPHMKDHPRSWSHACPLYVSEDDQVLLDMTSKLVVYNYRDG 155

Query: 52  S 50
           +
Sbjct: 156 T 156


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/65 (47%), Positives = 43/65 (66%)
 Frame = -2

Query: 244 GNRVDVWVMKVYGAKDSWTKLVSVPYPTEPERGKGYLAPLFIANECKVLLKFGSKLVLYD 65
           G R DVWV+K +G +DSWTKL S+PY  +P     Y  PL I    +VLL++ S LV+Y+
Sbjct: 351 GVRADVWVLKEFGVRDSWTKLFSIPYLDDP-LWFHYSVPLCIDVGGEVLLEYKSVLVIYN 409

Query: 64  AKNGS 50
            K+G+
Sbjct: 410 PKHGT 414


>ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355501748|gb|AES82951.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 385

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 6/67 (8%)
 Frame = -2

Query: 232 DVWVMKVYGAKDSWTKLVSVPYPTEPERGKGYLAPLFIANECKVLLKF---GS---KLVL 71
           D+WVMK YG K+SWTKL +VPY  E      Y   L+++ + K+L++F   GS   KLV+
Sbjct: 293 DIWVMKEYGNKESWTKLYNVPY-MEDRGLSSYTKVLYVSEDDKMLMEFYELGSSKLKLVV 351

Query: 70  YDAKNGS 50
           YD+KNG+
Sbjct: 352 YDSKNGT 358


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