BLASTX nr result

ID: Atractylodes22_contig00004993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004993
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    73   3e-11
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    64   1e-08

>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
 Frame = -2

Query: 340  YNPKVFGRPGPGEVGMWLSYWPIGNTLDVADKVNVSIVVIHGLLVIECGASLVYADDEVV 161
            Y+P  +G P P E  +WLS+W  G+ L+V D+V++ + +  GL V +CG  L+Y ++   
Sbjct: 1055 YSPTFYGMPKPLEEMLWLSHWTFGDQLEVGDEVHILVEMASGLTVKKCGIRLIYEEESTT 1114

Query: 160  DETLE--KNMGWIETLGG-NLSGFQLITGAYYLCRRDF 56
             E  E   +  W  T+   ++  ++L T +YYLC   F
Sbjct: 1115 QEIAESSSSSSWYRTMADTDMEAYELGTASYYLCHHKF 1152


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
 Frame = -2

Query: 361  TNGVDLMYNPKVFGRPGPGEVGM-WLSYWPIGNTLDVADKVNVSIVVIHGLLVIECGASL 185
            T G +  Y+P  +  P   +  M WLSYW  G   +V DKVNVS+ +  G  V ECG  +
Sbjct: 959  TKGTNWSYSPTFYALPEDDDEDMLWLSYWKFGGEFEVGDKVNVSVRMPFGYYVKECGIRI 1018

Query: 184  VYADDEVVDET-----LEKNMGWIETL-GGNLSGFQLITGAYYLCRRDFFELSEVGRLTP 23
            VY ++E  +++     +  N  W + +   +LS +Q+    Y+L    F    E+ +L P
Sbjct: 1019 VYEENEKDNQSNTADIIPSNSFWHQNITDRDLSPYQVGKSVYFLHHHPFTTPDEILKLAP 1078


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