BLASTX nr result

ID: Atractylodes22_contig00004988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004988
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134609.1| PREDICTED: DNA-damage-repair/toleration prot...   333   8e-89
ref|XP_002281743.1| PREDICTED: DNA-damage-repair/toleration prot...   332   2e-88
ref|XP_002316803.1| predicted protein [Populus trichocarpa] gi|2...   330   7e-88
ref|XP_003556542.1| PREDICTED: DNA-damage-repair/toleration prot...   329   9e-88
ref|XP_002523197.1| DNA-damage repair protein drt111, putative [...   328   2e-87

>ref|XP_004134609.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
            chloroplastic-like [Cucumis sativus]
          Length = 372

 Score =  333 bits (853), Expect = 8e-89
 Identities = 173/228 (75%), Positives = 184/228 (80%)
 Frame = +1

Query: 505  NISGEEAWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGFSIEKSETGGLGVGAGGQMTA 684
            NISGEEAW+                            DGFSI KSETGGLGVGAGGQMTA
Sbjct: 155  NISGEEAWRRRAAKSGAIPRSPSPPSSV---------DGFSIGKSETGGLGVGAGGQMTA 205

Query: 685  AQRMMAKMGWKAGQGLGKQEQGITTPLMAKKTDRRAGVIVNASEPKQQPEKKARGVNING 864
            AQRMMAKMGWK GQGLGKQEQGITTPLMAKKTD RAGVIVNA++ K   EKK + VN NG
Sbjct: 206  AQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKS--EKKVKSVNFNG 263

Query: 865  QPTRVVLLRNMVGPGEVDDDLETEVAEECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQF 1044
             PTRV+LLRNMVGPGEVDD+LE EV  ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQF
Sbjct: 264  LPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQF 323

Query: 1045 ERSEQATKALVDLEGRFFGGRVVRATFYEEERFNTNELAPMPGEVPGF 1188
            ERSE+ TKALVDL+GR+FGGRVVRATFY+EERF+ NELAPMPGEVPGF
Sbjct: 324  ERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELAPMPGEVPGF 371


>ref|XP_002281743.1| PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic
            [Vitis vinifera]
          Length = 383

 Score =  332 bits (850), Expect = 2e-88
 Identities = 172/228 (75%), Positives = 183/228 (80%)
 Frame = +1

Query: 505  NISGEEAWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGFSIEKSETGGLGVGAGGQMTA 684
            NISGEEAW+                            DGF+I KSET GLGVGAGGQMTA
Sbjct: 166  NISGEEAWRRRAAMSGAVPRSPSPPTSG---------DGFTIGKSETVGLGVGAGGQMTA 216

Query: 685  AQRMMAKMGWKAGQGLGKQEQGITTPLMAKKTDRRAGVIVNASEPKQQPEKKARGVNING 864
            AQRMMAKMGWK GQGLGKQEQGITTPLMAKKTDRRAGVIVNASE K  PEKK + VN N 
Sbjct: 217  AQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDRRAGVIVNASESK--PEKKVKSVNFNS 274

Query: 865  QPTRVVLLRNMVGPGEVDDDLETEVAEECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQF 1044
             PTRV+LLRNMVGPGEVDD+LE EV  ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQF
Sbjct: 275  PPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQF 334

Query: 1045 ERSEQATKALVDLEGRFFGGRVVRATFYEEERFNTNELAPMPGEVPGF 1188
            ERSE+ TKALVDL+GRFFGGRVV ATFY+E+RF+ NELAPMPGE+PGF
Sbjct: 335  ERSEETTKALVDLDGRFFGGRVVHATFYDEDRFSKNELAPMPGEIPGF 382



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 41/92 (44%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
 Frame = +1

Query: 37  SSNVWSSSVKMAPPTXXXXXXXXXXXXXXXXXXXXXXXXRVVNST---------PVPDVI 189
           +S+VWSSS KMAP                          + +NS+         P P V+
Sbjct: 22  NSSVWSSSAKMAPAALRKPSSVFAPPQSVLKTQHAQAKPKTLNSSKILISPGLAPSPSVL 81

Query: 190 ----TRSSSFQPALVGVTSSVVEEYDPARPND 273
                RS SFQPALVGVTSSVVEEYDPARPND
Sbjct: 82  PNEGARSPSFQPALVGVTSSVVEEYDPARPND 113


>ref|XP_002316803.1| predicted protein [Populus trichocarpa] gi|222859868|gb|EEE97415.1|
            predicted protein [Populus trichocarpa]
          Length = 362

 Score =  330 bits (845), Expect = 7e-88
 Identities = 171/231 (74%), Positives = 185/231 (80%)
 Frame = +1

Query: 496  KDFNISGEEAWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGFSIEKSETGGLGVGAGGQ 675
            +D NISGEEAWK                            DGF I KSET GLGVGAGGQ
Sbjct: 142  RDTNISGEEAWKRRAAMSGGGVPRSPSPPSNG--------DGFRIGKSETVGLGVGAGGQ 193

Query: 676  MTAAQRMMAKMGWKAGQGLGKQEQGITTPLMAKKTDRRAGVIVNASEPKQQPEKKARGVN 855
            MTAAQRMMAKMGWK GQGLGKQEQGITTPLMAKKTDRRAGVIVNASE K  PEKK + VN
Sbjct: 194  MTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDRRAGVIVNASESK--PEKKVKSVN 251

Query: 856  INGQPTRVVLLRNMVGPGEVDDDLETEVAEECAKYGTVTRVLIFEITEPNFPVDEAVRIF 1035
            +NG PTRV+LLRNMVGPGEVDD+LE EVA ECAKYGTVTRVLIFEITE NFP +EAVRIF
Sbjct: 252  LNGTPTRVLLLRNMVGPGEVDDELEDEVASECAKYGTVTRVLIFEITELNFPREEAVRIF 311

Query: 1036 VQFERSEQATKALVDLEGRFFGGRVVRATFYEEERFNTNELAPMPGEVPGF 1188
            +QFERSE+ TKAL+DL+GRFFGG VVRATFY+EERF+ NELAP+PGE+PGF
Sbjct: 312  IQFERSEETTKALIDLDGRFFGGNVVRATFYDEERFSKNELAPIPGEIPGF 362



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 32/82 (39%), Positives = 40/82 (48%)
 Frame = +1

Query: 28  TNPSSNVWSSSVKMAPPTXXXXXXXXXXXXXXXXXXXXXXXXRVVNSTPVPDVITRSSSF 207
           T  +S VWS+S  MAPPT                         +++  P   V+    + 
Sbjct: 20  TTTTSTVWSTSTLMAPPTLRKPMPPPPPQTILKSQNKPKPSKTLLSPAPPVTVLPDEVAA 79

Query: 208 QPALVGVTSSVVEEYDPARPND 273
           QPALVGV S V+EEYDPARPND
Sbjct: 80  QPALVGVNSVVIEEYDPARPND 101


>ref|XP_003556542.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
            chloroplastic-like [Glycine max]
          Length = 392

 Score =  329 bits (844), Expect = 9e-88
 Identities = 167/229 (72%), Positives = 182/229 (79%), Gaps = 1/229 (0%)
 Frame = +1

Query: 505  NISGEEAWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGFSIEKSETGGLGVGAGGQMTA 684
            N+SGEEAW+                            DGF+I KSETGGLGVGAGGQMTA
Sbjct: 163  NVSGEEAWRRRAAMSGAGSGSGAVLVPRSPSPPPGNVDGFTIGKSETGGLGVGAGGQMTA 222

Query: 685  AQRMMAKMGWKAGQGLGKQEQGITTPLMAKKTDRRAGVIVNASEPKQQPE-KKARGVNIN 861
            AQRMMAKMGWK GQGLGKQEQGITTPLMAKKTDRRAGVIVNAS+       KK + VN N
Sbjct: 223  AQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDRRAGVIVNASDNNNSSSSKKVKSVNFN 282

Query: 862  GQPTRVVLLRNMVGPGEVDDDLETEVAEECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQ 1041
            G PTRV+LLRNMVGPGEVDD+LE EV  ECAKYGTVTRVLIFEITEPNFPV EAVRIFVQ
Sbjct: 283  GVPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVHEAVRIFVQ 342

Query: 1042 FERSEQATKALVDLEGRFFGGRVVRATFYEEERFNTNELAPMPGEVPGF 1188
            FERSE+ TKALVDL+GR+FGGRVVRA+FY+EE+F+ NELAPMPGE+PGF
Sbjct: 343  FERSEETTKALVDLDGRYFGGRVVRASFYDEEKFSKNELAPMPGEIPGF 391


>ref|XP_002523197.1| DNA-damage repair protein drt111, putative [Ricinus communis]
            gi|223537604|gb|EEF39228.1| DNA-damage repair protein
            drt111, putative [Ricinus communis]
          Length = 387

 Score =  328 bits (841), Expect = 2e-87
 Identities = 171/235 (72%), Positives = 184/235 (78%), Gaps = 4/235 (1%)
 Frame = +1

Query: 496  KDFNISGEEAWK----XXXXXXXXXXXXXXXXXXXXXXXXXXXXDGFSIEKSETGGLGVG 663
            +D NISGEEAW+                                DGFSI KSE+GGLGVG
Sbjct: 155  RDRNISGEEAWRRRAAMSSSSGGGARSPESGGGGGGGGGGGGGGDGFSIGKSESGGLGVG 214

Query: 664  AGGQMTAAQRMMAKMGWKAGQGLGKQEQGITTPLMAKKTDRRAGVIVNASEPKQQPEKKA 843
            AGGQMTAAQRMMAKMGWK GQGLG+QEQGITTPLMAKKTDRRAGVIVNASE K   EKK 
Sbjct: 215  AGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAKKTDRRAGVIVNASETK--VEKKV 272

Query: 844  RGVNINGQPTRVVLLRNMVGPGEVDDDLETEVAEECAKYGTVTRVLIFEITEPNFPVDEA 1023
            + VN NG PTRV+LLRNMVGPGEVDD+LE EV  ECAKYGTVTRVLIFEITEPNFP DEA
Sbjct: 273  KSVNFNGTPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPRDEA 332

Query: 1024 VRIFVQFERSEQATKALVDLEGRFFGGRVVRATFYEEERFNTNELAPMPGEVPGF 1188
            VRIFVQFERSE+ TKALVDL+GRFFGG VV ATFY+EE+F+ NELAPMPGE+PGF
Sbjct: 333  VRIFVQFERSEETTKALVDLDGRFFGGNVVHATFYDEEKFSKNELAPMPGEIPGF 387


Top