BLASTX nr result

ID: Atractylodes22_contig00004920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004920
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32330.3| unnamed protein product [Vitis vinifera]              186   3e-45
ref|XP_003625831.1| SnRNP core Sm protein Sm-X5-like protein [Me...   186   3e-45
ref|XP_004135926.1| PREDICTED: U6 snRNA-associated Sm-like prote...   186   4e-45
ref|XP_002271534.2| PREDICTED: BTB/POZ and MATH domain-containin...   184   9e-45
ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus ...   183   2e-44

>emb|CBI32330.3| unnamed protein product [Vitis vinifera]
          Length = 137

 Score =  186 bits (472), Expect = 3e-45
 Identities = 91/93 (97%), Positives = 93/93 (100%)
 Frame = -2

Query: 517 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQEKFPHMLSVRNC 338
           MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQ+K+PHMLSVRNC
Sbjct: 45  MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 104

Query: 337 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 239
           FIRGSVVRYVQLPPEGVDIELLHDATRREARGG
Sbjct: 105 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 137


>ref|XP_003625831.1| SnRNP core Sm protein Sm-X5-like protein [Medicago truncatula]
           gi|355500846|gb|AES82049.1| SnRNP core Sm protein
           Sm-X5-like protein [Medicago truncatula]
           gi|388519597|gb|AFK47860.1| unknown [Lotus japonicus]
          Length = 93

 Score =  186 bits (472), Expect = 3e-45
 Identities = 91/93 (97%), Positives = 93/93 (100%)
 Frame = -2

Query: 517 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQEKFPHMLSVRNC 338
           MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQ+K+PHMLSVRNC
Sbjct: 1   MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60

Query: 337 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 239
           FIRGSVVRYVQLPPEGVDIELLHDATRREARGG
Sbjct: 61  FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 93


>ref|XP_004135926.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like isoform 1
           [Cucumis sativus] gi|449436293|ref|XP_004135927.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
           isoform 2 [Cucumis sativus]
           gi|449436295|ref|XP_004135928.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm2-like isoform 3
           [Cucumis sativus] gi|449489026|ref|XP_004158193.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
           isoform 1 [Cucumis sativus]
           gi|449489028|ref|XP_004158194.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm2-like isoform 2
           [Cucumis sativus] gi|449489032|ref|XP_004158195.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
           isoform 3 [Cucumis sativus]
          Length = 93

 Score =  186 bits (471), Expect = 4e-45
 Identities = 90/93 (96%), Positives = 93/93 (100%)
 Frame = -2

Query: 517 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQEKFPHMLSVRNC 338
           MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQEK+PHMLSVRNC
Sbjct: 1   MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQEKYPHMLSVRNC 60

Query: 337 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 239
           FIRGSVVRYVQLPP+GVD+ELLHDATRREARGG
Sbjct: 61  FIRGSVVRYVQLPPDGVDVELLHDATRREARGG 93


>ref|XP_002271534.2| PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Vitis
           vinifera]
          Length = 489

 Score =  184 bits (468), Expect = 9e-45
 Identities = 90/94 (95%), Positives = 93/94 (98%)
 Frame = -2

Query: 520 KMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQEKFPHMLSVRN 341
           + LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQ+K+PHMLSVRN
Sbjct: 396 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 455

Query: 340 CFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 239
           CFIRGSVVRYVQLPPEGVDIELLHDATRREARGG
Sbjct: 456 CFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 489


>ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus communis]
           gi|223535995|gb|EEF37654.1| Speckle-type POZ protein,
           putative [Ricinus communis]
          Length = 500

 Score =  183 bits (465), Expect = 2e-44
 Identities = 89/94 (94%), Positives = 93/94 (98%)
 Frame = -2

Query: 520 KMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQEKFPHMLSVRN 341
           + LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQ+K+PHMLSVRN
Sbjct: 407 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 466

Query: 340 CFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 239
           CFIRGSVVRYVQLPPEGVDI+LLHDATRREARGG
Sbjct: 467 CFIRGSVVRYVQLPPEGVDIDLLHDATRREARGG 500


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