BLASTX nr result

ID: Atractylodes22_contig00004911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004911
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU33853.1| PPR1 protein [Capsicum annuum]                          62   6e-08
ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...    60   2e-07
gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]     58   9e-07
gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]     57   1e-06
ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
 Frame = +2

Query: 149 FHSDSDSDGDYPRSMF----QKVTNLDDGLNLFDKMTQRRPLPSVVKFNQLLDAVSKMGH 316
           FHS S S   +         ++V+ LDD ++LF +M + +PLPSV+ F++L   +  M H
Sbjct: 18  FHSSSSSSRSFSAKAHINFDKEVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKH 77

Query: 317 YSCSVDLFKQMCALGVPV 370
           YS  V LF++M  LG+P+
Sbjct: 78  YSAVVSLFREMRILGIPI 95


>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/55 (45%), Positives = 41/55 (74%)
 Frame = +2

Query: 203 VTNLDDGLNLFDKMTQRRPLPSVVKFNQLLDAVSKMGHYSCSVDLFKQMCALGVP 367
           V  +DD L+LF++M + RP PS+V F++LL ++++M HYS  + L+KQM + G+P
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIP 86


>gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/59 (47%), Positives = 40/59 (67%)
 Frame = +2

Query: 194 FQKVTNLDDGLNLFDKMTQRRPLPSVVKFNQLLDAVSKMGHYSCSVDLFKQMCALGVPV 370
           F+ V  LDD  +LF +M + +PLPSVV F++LL A+  M HYS  V LF+++  L +PV
Sbjct: 47  FENVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPV 105


>gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = +2

Query: 194 FQKVTNLDDGLNLFDKMTQRRPLPSVVKFNQLLDAVSKMGHYSCSVDLFKQMCALGVPV 370
           FQ V  LDD  +LF +M + +PLPSV  F++LL A+  M HYS  V LF+++  L +PV
Sbjct: 47  FQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPV 105


>ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/92 (33%), Positives = 48/92 (52%)
 Frame = +2

Query: 89  FSSFQLRQRFGLYKTLFIAPFHSDSDSDGDYPRSMFQKVTNLDDGLNLFDKMTQRRPLPS 268
           +++   R R+ + K      F SDS       +S F  +   DD + LF ++    PLPS
Sbjct: 21  YAATTTRLRYAISKFSVFLRFFSDSQKQNAKKKSGFDAI---DDAVALFTRLITMHPLPS 77

Query: 269 VVKFNQLLDAVSKMGHYSCSVDLFKQMCALGV 364
           VV+FN +L ++ KM HY  ++ L KQM   G+
Sbjct: 78  VVEFNMILGSIVKMKHYPTAISLSKQMGLRGI 109


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