BLASTX nr result

ID: Atractylodes22_contig00004909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004909
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chlorop...   347   2e-93
ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chlorop...   336   5e-90
ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chlorop...   334   2e-89
ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chlorop...   330   3e-88
ref|XP_002320459.1| predicted protein [Populus trichocarpa] gi|2...   330   4e-88

>ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Vitis
           vinifera] gi|297739290|emb|CBI28941.3| unnamed protein
           product [Vitis vinifera]
          Length = 226

 Score =  347 bits (890), Expect = 2e-93
 Identities = 172/214 (80%), Positives = 193/214 (90%), Gaps = 1/214 (0%)
 Frame = -1

Query: 857 ASSVTASLRTSQIGSAFLGESHGICVSTVPVTRLGFRRKTVECKESRIGKQPIEVPSNVV 678
           ASS+T S +TS + SAFLGE +GI VS+VPVTR+GF RKT+ECKESRIGK+PIEVPSNV 
Sbjct: 2   ASSITPSFQTSNLRSAFLGERNGIYVSSVPVTRVGFLRKTIECKESRIGKKPIEVPSNVT 61

Query: 677 ITLEGQDMKVKGPLGELALSYPREIAIDRQES-IIKVSKAVETRRANQMHGLFRTLTSNM 501
           ITLEGQD+KVKGPLGEL+ +YPRE+ + + ES I+ V KA ETRRANQMHGLFRTLT NM
Sbjct: 62  ITLEGQDLKVKGPLGELSRTYPREVKVQKDESGILTVKKAFETRRANQMHGLFRTLTDNM 121

Query: 500 VVGVSKGFEKKLQLVGVGYRATVEGKELVLNLGFSHPVKMTIPDDLKVKVEDNTRITVSG 321
           VVGVSKGFEK+LQLVGVGYRATVEGK+LVLNLGFSHPV+M IP DLKVKVEDNTRI VSG
Sbjct: 122 VVGVSKGFEKRLQLVGVGYRATVEGKDLVLNLGFSHPVRMPIPGDLKVKVEDNTRIIVSG 181

Query: 320 YNKSNIGQFAASIRKWRPPEPYKGKGVKYADEII 219
           Y+K NIGQFAAS+RKWRPPEPYKGKGVKYADEI+
Sbjct: 182 YDKCNIGQFAASVRKWRPPEPYKGKGVKYADEIV 215


>ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 1
           [Glycine max]
          Length = 226

 Score =  336 bits (861), Expect = 5e-90
 Identities = 165/214 (77%), Positives = 191/214 (89%), Gaps = 1/214 (0%)
 Frame = -1

Query: 857 ASSVTASLRTSQIGSAFLGESHGICVSTVPVTRLGFRRKTVECKESRIGKQPIEVPSNVV 678
           ASSVT+S R S + S F+GE++ + VS+VP   +GF RKTVECKESRIGKQPI VPSNV 
Sbjct: 2   ASSVTSSFRISNLKSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNVT 61

Query: 677 ITLEGQDMKVKGPLGELALSYPREIAIDRQES-IIKVSKAVETRRANQMHGLFRTLTSNM 501
           + LEGQD++VKGPLGELAL+YPRE+ ++R+ES  ++V KAVETRRANQMHGLFRTLT N+
Sbjct: 62  VKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDNL 121

Query: 500 VVGVSKGFEKKLQLVGVGYRATVEGKELVLNLGFSHPVKMTIPDDLKVKVEDNTRITVSG 321
           V+GVSKGF+KKLQLVGVGYRA VEG E+VLNLGFSHPVKMTIPD LKVKVE+NTRITVSG
Sbjct: 122 VIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITVSG 181

Query: 320 YNKSNIGQFAASIRKWRPPEPYKGKGVKYADEII 219
           Y+KS +GQFAASIRKWRPPEPYKGKGVKYADEI+
Sbjct: 182 YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIV 215


>ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Glycine
           max]
          Length = 226

 Score =  334 bits (857), Expect = 2e-89
 Identities = 165/213 (77%), Positives = 188/213 (88%), Gaps = 1/213 (0%)
 Frame = -1

Query: 854 SSVTASLRTSQIGSAFLGESHGICVSTVPVTRLGFRRKTVECKESRIGKQPIEVPSNVVI 675
           SSVT+S R S + S F+GE++   VSTVP   +GF RKTVECKESRIGKQPI VPSNV +
Sbjct: 3   SSVTSSFRISNLNSVFVGETNKFRVSTVPGAHVGFIRKTVECKESRIGKQPIPVPSNVTV 62

Query: 674 TLEGQDMKVKGPLGELALSYPREIAIDRQES-IIKVSKAVETRRANQMHGLFRTLTSNMV 498
            LEGQD++VKGPLGELALSYPRE+ ++R+ES  ++V KAVETRRANQMHGLFRTLT N+V
Sbjct: 63  KLEGQDIQVKGPLGELALSYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDNLV 122

Query: 497 VGVSKGFEKKLQLVGVGYRATVEGKELVLNLGFSHPVKMTIPDDLKVKVEDNTRITVSGY 318
           +GVSKGFEKKLQLVGVGYRA VEG E+VLNLGFSHPVKM IPD LKVKVE+NTRITVSGY
Sbjct: 123 IGVSKGFEKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMIIPDGLKVKVEENTRITVSGY 182

Query: 317 NKSNIGQFAASIRKWRPPEPYKGKGVKYADEII 219
           +KS +GQFAASIRKWRPPEPYKGKGVKYADE++
Sbjct: 183 DKSEVGQFAASIRKWRPPEPYKGKGVKYADEVV 215


>ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 2
           [Glycine max]
          Length = 223

 Score =  330 bits (846), Expect = 3e-88
 Identities = 165/214 (77%), Positives = 190/214 (88%), Gaps = 1/214 (0%)
 Frame = -1

Query: 857 ASSVTASLRTSQIGSAFLGESHGICVSTVPVTRLGFRRKTVECKESRIGKQPIEVPSNVV 678
           ASSVT+S R   I S F+GE++ + VS+VP   +GF RKTVECKESRIGKQPI VPSNV 
Sbjct: 2   ASSVTSSFR---IRSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNVT 58

Query: 677 ITLEGQDMKVKGPLGELALSYPREIAIDRQES-IIKVSKAVETRRANQMHGLFRTLTSNM 501
           + LEGQD++VKGPLGELAL+YPRE+ ++R+ES  ++V KAVETRRANQMHGLFRTLT N+
Sbjct: 59  VKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDNL 118

Query: 500 VVGVSKGFEKKLQLVGVGYRATVEGKELVLNLGFSHPVKMTIPDDLKVKVEDNTRITVSG 321
           V+GVSKGF+KKLQLVGVGYRA VEG E+VLNLGFSHPVKMTIPD LKVKVE+NTRITVSG
Sbjct: 119 VIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITVSG 178

Query: 320 YNKSNIGQFAASIRKWRPPEPYKGKGVKYADEII 219
           Y+KS +GQFAASIRKWRPPEPYKGKGVKYADEI+
Sbjct: 179 YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIV 212


>ref|XP_002320459.1| predicted protein [Populus trichocarpa] gi|222861232|gb|EEE98774.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  330 bits (845), Expect = 4e-88
 Identities = 161/216 (74%), Positives = 192/216 (88%), Gaps = 1/216 (0%)
 Frame = -1

Query: 863 MAASSVTASLRTSQIGSAFLGESHGICVSTVPVTRLGFRRKTVECKESRIGKQPIEVPSN 684
           MA+SS+T+S +TS + S FLGE + ICV +VPVTR+GF RK +ECKESRIGKQPI+VPSN
Sbjct: 1   MASSSITSSFQTSNLRSVFLGERNRICVPSVPVTRIGFLRKAIECKESRIGKQPIQVPSN 60

Query: 683 VVITLEGQDMKVKGPLGELALSYPREIAIDRQES-IIKVSKAVETRRANQMHGLFRTLTS 507
           V I LEGQD+KVKGPLGEL+ +YPRE+ ++R E  II+V KA+ETRRANQMHGLFRTLT 
Sbjct: 61  VTIKLEGQDLKVKGPLGELSRTYPREVKLERDEDGIIRVKKALETRRANQMHGLFRTLTD 120

Query: 506 NMVVGVSKGFEKKLQLVGVGYRATVEGKELVLNLGFSHPVKMTIPDDLKVKVEDNTRITV 327
           NMVVGVSKGFEK+LQLVGVGYRA VEGK+LVL+LGFSHPV+M IP  L+VKVE+NTRI V
Sbjct: 121 NMVVGVSKGFEKRLQLVGVGYRANVEGKDLVLSLGFSHPVRMAIPATLQVKVEENTRIVV 180

Query: 326 SGYNKSNIGQFAASIRKWRPPEPYKGKGVKYADEII 219
           SG++K +IG+FAASIR+WRPPEPYKGKGV+YA+EII
Sbjct: 181 SGFDKCSIGEFAASIRRWRPPEPYKGKGVRYANEII 216


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