BLASTX nr result

ID: Atractylodes22_contig00004894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004894
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38998.3| unnamed protein product [Vitis vinifera]              223   4e-56
ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloro...   223   4e-56
sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, ...   216   6e-54
ref|NP_001236786.1| uncharacterized protein LOC100500099 [Glycin...   214   2e-53
gb|AFK44729.1| unknown [Lotus japonicus]                              214   3e-53

>emb|CBI38998.3| unnamed protein product [Vitis vinifera]
          Length = 158

 Score =  223 bits (569), Expect = 4e-56
 Identities = 116/159 (72%), Positives = 126/159 (79%)
 Frame = -1

Query: 571 LNLTSPGNNGFEHNFTIIDNGGRVSAMRHGRRVPKLNRPPDQRKALLRGLTTQLLKHGRI 392
           L+L+SP +  FEHNFTIIDNGGR+SAMRHGRRVPKLNRPPDQR+ALLRGLTTQLLK+GRI
Sbjct: 17  LSLSSPESTSFEHNFTIIDNGGRISAMRHGRRVPKLNRPPDQRRALLRGLTTQLLKYGRI 76

Query: 391 KTTRARASAVRKYVDKMITLAKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKQIVH 212
           KTTRARASA+RKYVDKMITLAK+G                              EKQIVH
Sbjct: 77  KTTRARASAMRKYVDKMITLAKDG-----------------SLHKRRQALGFIYEKQIVH 119

Query: 211 ALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 95
           ALFAEVP+RYG+RNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 120 ALFAEVPDRYGDRNGGYTRIIRTLPRRGDNAPMAYIELV 158


>ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloroplastic-like [Vitis
           vinifera]
          Length = 198

 Score =  223 bits (569), Expect = 4e-56
 Identities = 116/159 (72%), Positives = 126/159 (79%)
 Frame = -1

Query: 571 LNLTSPGNNGFEHNFTIIDNGGRVSAMRHGRRVPKLNRPPDQRKALLRGLTTQLLKHGRI 392
           L+L+SP +  FEHNFTIIDNGGR+SAMRHGRRVPKLNRPPDQR+ALLRGLTTQLLK+GRI
Sbjct: 57  LSLSSPESTSFEHNFTIIDNGGRISAMRHGRRVPKLNRPPDQRRALLRGLTTQLLKYGRI 116

Query: 391 KTTRARASAVRKYVDKMITLAKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKQIVH 212
           KTTRARASA+RKYVDKMITLAK+G                              EKQIVH
Sbjct: 117 KTTRARASAMRKYVDKMITLAKDG-----------------SLHKRRQALGFIYEKQIVH 159

Query: 211 ALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 95
           ALFAEVP+RYG+RNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 160 ALFAEVPDRYGDRNGGYTRIIRTLPRRGDNAPMAYIELV 198


>sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, chloroplastic; AltName:
           Full=CL17; Flags: Precursor gi|189096138|pdb|3BBO|P
           Chain P, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|3298443|dbj|BAA31512.1| chloroplast
           ribosomal protein L17 [Nicotiana tabacum]
          Length = 205

 Score =  216 bits (550), Expect = 6e-54
 Identities = 112/159 (70%), Positives = 123/159 (77%)
 Frame = -1

Query: 571 LNLTSPGNNGFEHNFTIIDNGGRVSAMRHGRRVPKLNRPPDQRKALLRGLTTQLLKHGRI 392
           L+L+S  +  FEH+FT+IDNGGRV AMRHGR+VPKLNRPPDQR+ALLRGLTTQLLKHGRI
Sbjct: 64  LSLSSQDSTSFEHSFTVIDNGGRVFAMRHGRKVPKLNRPPDQRRALLRGLTTQLLKHGRI 123

Query: 391 KTTRARASAVRKYVDKMITLAKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKQIVH 212
           KTT+ARA AVRKYVDKMIT+AK+G                              EKQIVH
Sbjct: 124 KTTKARARAVRKYVDKMITMAKDG-----------------SLHKRRQALGFIYEKQIVH 166

Query: 211 ALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 95
           ALFAEVP+RYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 167 ALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 205


>ref|NP_001236786.1| uncharacterized protein LOC100500099 [Glycine max]
           gi|255629133|gb|ACU14911.1| unknown [Glycine max]
          Length = 217

 Score =  214 bits (545), Expect = 2e-53
 Identities = 113/159 (71%), Positives = 122/159 (76%)
 Frame = -1

Query: 571 LNLTSPGNNGFEHNFTIIDNGGRVSAMRHGRRVPKLNRPPDQRKALLRGLTTQLLKHGRI 392
           L+  S    G +H+FTIIDNGGRV+AMRHGRRVPKLNRPPDQR+AL+RGLTTQLLK+GRI
Sbjct: 76  LSAPSSEYTGCDHSFTIIDNGGRVTAMRHGRRVPKLNRPPDQRRALIRGLTTQLLKYGRI 135

Query: 391 KTTRARASAVRKYVDKMITLAKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKQIVH 212
           KTTRARASA+RKYVDKMITLAK+G                              EKQIVH
Sbjct: 136 KTTRARASAIRKYVDKMITLAKDG-----------------SLHKRRQALGFIYEKQIVH 178

Query: 211 ALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 95
           ALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 179 ALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 217


>gb|AFK44729.1| unknown [Lotus japonicus]
          Length = 216

 Score =  214 bits (544), Expect = 3e-53
 Identities = 114/159 (71%), Positives = 121/159 (76%)
 Frame = -1

Query: 571 LNLTSPGNNGFEHNFTIIDNGGRVSAMRHGRRVPKLNRPPDQRKALLRGLTTQLLKHGRI 392
           L+ +S   N F H FTIIDNGGRV AMRHGRRVPKLNRPPDQR+AL+RGLTTQLLK+GRI
Sbjct: 75  LSSSSSEFNSFSHCFTIIDNGGRVYAMRHGRRVPKLNRPPDQRRALIRGLTTQLLKYGRI 134

Query: 391 KTTRARASAVRKYVDKMITLAKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKQIVH 212
           KTTRARASA+RKYVDKMITLAK+G                              EKQIVH
Sbjct: 135 KTTRARASAIRKYVDKMITLAKDG-----------------SLHKRRQALGFIYEKQIVH 177

Query: 211 ALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 95
           ALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 178 ALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 216


Top