BLASTX nr result

ID: Atractylodes22_contig00004795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004795
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136573.1| PREDICTED: zinc finger CCCH domain-containin...   323   6e-92
ref|XP_002533458.1| conserved hypothetical protein [Ricinus comm...   320   5e-91
ref|XP_004146386.1| PREDICTED: zinc finger CCCH domain-containin...   313   3e-90
ref|XP_002533457.1| conserved hypothetical protein [Ricinus comm...   311   7e-90
ref|XP_004170288.1| PREDICTED: zinc finger CCCH domain-containin...   323   6e-86

>ref|XP_004136573.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           [Cucumis sativus]
          Length = 296

 Score =  323 bits (828), Expect(2) = 6e-92
 Identities = 164/231 (70%), Positives = 187/231 (80%), Gaps = 2/231 (0%)
 Frame = -2

Query: 975 QMMNLPPTSTG-RNTSAPSN-IQNGSSAPATKSKMCNKYNTAEGCKFGDKCHFAHGAWEL 802
           QMMNLPP     RN  AP   + NGS+  A KS+MCNKYN+AEGCKFGDKCHFAH  WEL
Sbjct: 70  QMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKCHFAHAEWEL 129

Query: 801 GKPIVSPHEEPRTLGHIPSRFGGHMEPPAPPGVAASFGASATAKISVDASLAGAIIGKGG 622
           GKP    H++PR++GHIP+R    M+   PPG+AASFGAS+TAKISVDASLAGAIIGKGG
Sbjct: 130 GKPSAPSHDDPRSMGHIPNRLASRMDA-GPPGLAASFGASSTAKISVDASLAGAIIGKGG 188

Query: 621 VNSKQICRQTGAKLAIRDHESDANLRNIELEGTFDQIKEASAMVRELIVSVGSAAGGPPV 442
           +NSKQICR+TGAKL+IRDHESD NLRNIELEG+FDQIKEASAMV+ELIV+V  A  GPP 
Sbjct: 189 INSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVSMA--GPPK 246

Query: 441 KPPGMHHGTPPIAPMSNYKTKMCENFAKGSCTFGERCHFAHGAAELRKTGV 289
              G   GT   A  +N+KTK+C+NFAKGSCTFGERCHFAHGAAELRK+GV
Sbjct: 247 SATGATGGTAGPAG-NNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 296



 Score = 42.4 bits (98), Expect(2) = 6e-92
 Identities = 24/40 (60%), Positives = 27/40 (67%), Gaps = 6/40 (15%)
 Frame = -3

Query: 1196 MDTRKRGRPEA--KANGGAKKFKSELQSL----GSKSKPC 1095
            MDTRKRGR E   KANGG KK K +++ L     SKSKPC
Sbjct: 1    MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPC 40


>ref|XP_002533458.1| conserved hypothetical protein [Ricinus communis]
           gi|223526691|gb|EEF28927.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 295

 Score =  320 bits (821), Expect(2) = 5e-91
 Identities = 164/232 (70%), Positives = 185/232 (79%), Gaps = 3/232 (1%)
 Frame = -2

Query: 975 QMMNLPP--TSTGRNTSAPSN-IQNGSSAPATKSKMCNKYNTAEGCKFGDKCHFAHGAWE 805
           QMMNL P  TS  RN  APS  I NGS+  A KS++CNKYNTAEGCKFGDKC+FAHG WE
Sbjct: 69  QMMNLGPAVTSIPRNMPAPSPAIPNGSAPSAVKSRLCNKYNTAEGCKFGDKCNFAHGEWE 128

Query: 804 LGKPIVSPHEEPRTLGHIPSRFGGHMEPPAPPGVAASFGASATAKISVDASLAGAIIGKG 625
           LGKP+V  H++PR  G IP R GG MEPP PPG AASFGASATAKISV+ASLAGAIIGKG
Sbjct: 129 LGKPVVPSHDDPRAFGTIPGRMGGRMEPP-PPGSAASFGASATAKISVEASLAGAIIGKG 187

Query: 624 GVNSKQICRQTGAKLAIRDHESDANLRNIELEGTFDQIKEASAMVRELIVSVGSAAGGPP 445
           GVNSKQICRQTGAKL+IR+HE+D N+RNIE EG+F+QIK+ASAMV ELI S+ SA     
Sbjct: 188 GVNSKQICRQTGAKLSIREHETDPNVRNIEFEGSFEQIKQASAMVSELIASISSANASAK 247

Query: 444 VKPPGMHHGTPPIAPMSNYKTKMCENFAKGSCTFGERCHFAHGAAELRKTGV 289
                  HG P     SN+KTK+CENF+KGSCTFG+RCHFAHGAAELRK+GV
Sbjct: 248 ATGLIGGHGHPG----SNFKTKLCENFSKGSCTFGQRCHFAHGAAELRKSGV 295



 Score = 42.0 bits (97), Expect(2) = 5e-91
 Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
 Frame = -3

Query: 1196 MDTRKRGRPEAKANGGAKKFKSELQS----LGSKSKPC 1095
            MD RKRGR +   NGG KK + E+ S    +GSKSKPC
Sbjct: 2    MDIRKRGRNDFNVNGGFKKSRKEMDSFSTGVGSKSKPC 39


>ref|XP_004146386.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           [Cucumis sativus] gi|449480828|ref|XP_004156007.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           14-like [Cucumis sativus]
          Length = 305

 Score =  313 bits (802), Expect(2) = 3e-90
 Identities = 165/242 (68%), Positives = 186/242 (76%), Gaps = 13/242 (5%)
 Frame = -2

Query: 975 QMMNLPPTST--GRNTSAPSNIQNGS-SAPA-TKSKMCNKYNTAEGCKFGDKCHFAHGAW 808
           QMMNL P      RN +AP ++ NG  SAP+  K++MCNKYNTAEGCKFGDKC+FAHG W
Sbjct: 69  QMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDKCNFAHGEW 128

Query: 807 ELGKPIVSPHEEPRTLG---------HIPSRFGGHMEPPAPPGVAASFGASATAKISVDA 655
           ELG+P    H+ PR +G         H+  R GG M+ P PPG AASFGASATAKIS+DA
Sbjct: 129 ELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLP-PPGPAASFGASATAKISIDA 187

Query: 654 SLAGAIIGKGGVNSKQICRQTGAKLAIRDHESDANLRNIELEGTFDQIKEASAMVRELIV 475
           SLAGAIIGKGG+NSKQICRQTGAKL+IRDHESD NLRNIELEGTF+QI EASAMVRELI+
Sbjct: 188 SLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELII 247

Query: 474 SVGSAAGGPPVKPPGMHHGTPPIAPMSNYKTKMCENFAKGSCTFGERCHFAHGAAELRKT 295
           +V  A  GP     GM  G  P    SNYKTK+C+NFAKGSCTFGERCHFAHGAAELRK+
Sbjct: 248 TVSMA--GPGKASGGMGGGPAPTG--SNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKS 303

Query: 294 GV 289
           GV
Sbjct: 304 GV 305



 Score = 46.6 bits (109), Expect(2) = 3e-90
 Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 5/39 (12%)
 Frame = -3

Query: 1196 MDTRKRGRPEA--KANGGAKKFKSELQSL---GSKSKPC 1095
            MD RKRGRPEA   +NG  KK K EL+SL   GSKSKPC
Sbjct: 1    MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPC 39


>ref|XP_002533457.1| conserved hypothetical protein [Ricinus communis]
           gi|223526690|gb|EEF28926.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 295

 Score =  311 bits (796), Expect(2) = 7e-90
 Identities = 160/232 (68%), Positives = 179/232 (77%), Gaps = 3/232 (1%)
 Frame = -2

Query: 975 QMMNLPP--TSTGRNTSAPSN-IQNGSSAPATKSKMCNKYNTAEGCKFGDKCHFAHGAWE 805
           QMMNL P  TS  RN  APS  I NGS+  A KS+MCNKYNT EGCKFGDKC+FAHG WE
Sbjct: 69  QMMNLGPAVTSVPRNMPAPSPAIPNGSAPSAVKSRMCNKYNTVEGCKFGDKCNFAHGEWE 128

Query: 804 LGKPIVSPHEEPRTLGHIPSRFGGHMEPPAPPGVAASFGASATAKISVDASLAGAIIGKG 625
           LGK +   H++PR  G    R GG MEPP PPG AASFGASATAKISV+ASLAGAIIGKG
Sbjct: 129 LGKSMAPSHDDPRAFGTFAGRMGGRMEPP-PPGPAASFGASATAKISVEASLAGAIIGKG 187

Query: 624 GVNSKQICRQTGAKLAIRDHESDANLRNIELEGTFDQIKEASAMVRELIVSVGSAAGGPP 445
           GVNSKQICRQTGAKL+IR+HE+D NLRNIE EG+F+QIK+ASAMV ELI S+ S      
Sbjct: 188 GVNSKQICRQTGAKLSIREHETDPNLRNIEFEGSFEQIKQASAMVSELIASISSVNASAK 247

Query: 444 VKPPGMHHGTPPIAPMSNYKTKMCENFAKGSCTFGERCHFAHGAAELRKTGV 289
                  HG P     SN+KTK+CENF+KGSCTFG+RCHFAHGAAELRK+GV
Sbjct: 248 ATGLTGGHGHPG----SNFKTKLCENFSKGSCTFGQRCHFAHGAAELRKSGV 295



 Score = 47.8 bits (112), Expect(2) = 7e-90
 Identities = 25/38 (65%), Positives = 27/38 (71%), Gaps = 4/38 (10%)
 Frame = -3

Query: 1196 MDTRKRGRPEAKANGGAKKFKSELQSL----GSKSKPC 1095
            MDTRKRGR +  ANGG KK K E+ SL    GSKSKPC
Sbjct: 2    MDTRKRGRNDFNANGGFKKSKREMDSLSTGVGSKSKPC 39


>ref|XP_004170288.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           [Cucumis sativus]
          Length = 271

 Score =  323 bits (828), Expect = 6e-86
 Identities = 164/231 (70%), Positives = 187/231 (80%), Gaps = 2/231 (0%)
 Frame = -2

Query: 975 QMMNLPPTSTG-RNTSAPSN-IQNGSSAPATKSKMCNKYNTAEGCKFGDKCHFAHGAWEL 802
           QMMNLPP     RN  AP   + NGS+  A KS+MCNKYN+AEGCKFGDKCHFAH  WEL
Sbjct: 45  QMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKCHFAHAEWEL 104

Query: 801 GKPIVSPHEEPRTLGHIPSRFGGHMEPPAPPGVAASFGASATAKISVDASLAGAIIGKGG 622
           GKP    H++PR++GHIP+R    M+   PPG+AASFGAS+TAKISVDASLAGAIIGKGG
Sbjct: 105 GKPSAPSHDDPRSMGHIPNRLASRMDA-GPPGLAASFGASSTAKISVDASLAGAIIGKGG 163

Query: 621 VNSKQICRQTGAKLAIRDHESDANLRNIELEGTFDQIKEASAMVRELIVSVGSAAGGPPV 442
           +NSKQICR+TGAKL+IRDHESD NLRNIELEG+FDQIKEASAMV+ELIV+V  A  GPP 
Sbjct: 164 INSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVSMA--GPPK 221

Query: 441 KPPGMHHGTPPIAPMSNYKTKMCENFAKGSCTFGERCHFAHGAAELRKTGV 289
              G   GT   A  +N+KTK+C+NFAKGSCTFGERCHFAHGAAELRK+GV
Sbjct: 222 SATGATGGTAGPAG-NNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 271


Top