BLASTX nr result

ID: Atractylodes22_contig00004778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004778
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus]             155   2e-36
ref|NP_620566.1| polyprotein [Satsuma dwarf virus] gi|81979373|s...   155   2e-36

>ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus]
          Length = 1190

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/130 (54%), Positives = 91/130 (70%)
 Frame = +1

Query: 1   WLASTYSVIASFFLRAKEYILDCIELVKSKLPPYLFDEEVGRYXXXXXXXXXXXXXXNSI 180
           WL+S+Y+ IA+FF + K YI++C+ELVK+KLP YLF  EVGRY              NS+
Sbjct: 438 WLSSSYASIANFFTKGKVYIMECLELVKAKLPSYLFSAEVGRYILLLLGVFLCLGLVNSL 497

Query: 181 VYTVAPKYALSFGTVCKXXXXXXXXXXXXDITAYLFNGSGDKLRSFVNIICNLCGCKNYF 360
           +Y+VAP+Y+LSFGTVCK            D+ AYLFN  G KLR+FVNI+CN+CGCKN+F
Sbjct: 498 IYSVAPQYSLSFGTVCKISLGALALVGLGDLVAYLFNSPGAKLRAFVNIVCNMCGCKNFF 557

Query: 361 SPSGDAEERS 390
           +PS D EERS
Sbjct: 558 APSSDGEERS 567


>ref|NP_620566.1| polyprotein [Satsuma dwarf virus]
           gi|81979373|sp|Q9WAL8.1|POL1_SDVS5 RecName: Full=RNA1
           polyprotein; AltName: Full=P1; Contains: RecName:
           Full=Putative helicase; AltName: Full=Putative
           NTP-binding protein; Contains: RecName: Full=Probable
           picornain 3C-like protease; Short=3C-like protease;
           Contains: RecName: Full=Probable RNA-directed RNA
           polymerase gi|4589400|dbj|BAA76746.1| polyprotein
           [Satsuma dwarf virus]
          Length = 2081

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/130 (54%), Positives = 91/130 (70%)
 Frame = +1

Query: 1   WLASTYSVIASFFLRAKEYILDCIELVKSKLPPYLFDEEVGRYXXXXXXXXXXXXXXNSI 180
           WL+S+Y+ IA+FF + K YI++C+ELVK+KLP YLF  EVGRY              NS+
Sbjct: 438 WLSSSYASIANFFTKGKVYIMECLELVKAKLPSYLFSAEVGRYILLLLGVFLCLGLVNSL 497

Query: 181 VYTVAPKYALSFGTVCKXXXXXXXXXXXXDITAYLFNGSGDKLRSFVNIICNLCGCKNYF 360
           +Y+VAP+Y+LSFGTVCK            D+ AYLFN  G KLR+FVNI+CN+CGCKN+F
Sbjct: 498 IYSVAPQYSLSFGTVCKISLGALALVGLGDLVAYLFNSPGAKLRAFVNIVCNMCGCKNFF 557

Query: 361 SPSGDAEERS 390
           +PS D EERS
Sbjct: 558 APSSDGEERS 567


Top