BLASTX nr result

ID: Atractylodes22_contig00004728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004728
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264997.1| PREDICTED: choline monooxygenase, chloroplas...    91   2e-29
dbj|BAC21260.1| choline monooxygenase [Arabidopsis thaliana]           91   6e-29
ref|NP_194718.2| choline monooxygenase [Arabidopsis thaliana] gi...    91   8e-29
ref|XP_002308100.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-28
pir||T08550 choline monooxygenase (EC 1.1.3.-) precursor - Arabi...    91   3e-28

>ref|XP_002264997.1| PREDICTED: choline monooxygenase, chloroplastic [Vitis vinifera]
           gi|297735449|emb|CBI17889.3| unnamed protein product
           [Vitis vinifera]
          Length = 441

 Score = 90.9 bits (224), Expect(2) = 2e-29
 Identities = 40/50 (80%), Positives = 46/50 (92%)
 Frame = -2

Query: 152 GPWMDTNLALPLGPRRCRVVFDYFLDAHLKDDEAFVGKSLEDSKRVQMED 3
           GPWMDTNL LPLGPR C+VVFDYFL+A LKDD+AF+ +SLEDS+RVQMED
Sbjct: 350 GPWMDTNLVLPLGPRTCKVVFDYFLEASLKDDKAFIERSLEDSERVQMED 399



 Score = 63.2 bits (152), Expect(2) = 2e-29
 Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 6/44 (13%)
 Frame = -3

Query: 262 TVYEKVSIQRCDG------DDFDRLGSKSLYAFIYPNFMVNRLG 149
           T +E+VSIQ C+G      DDFDRLG+K+LYAFIYPNFM+NR G
Sbjct: 307 TTFERVSIQSCEGGPGESEDDFDRLGTKALYAFIYPNFMINRYG 350


>dbj|BAC21260.1| choline monooxygenase [Arabidopsis thaliana]
          Length = 422

 Score = 91.3 bits (225), Expect(2) = 6e-29
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = -2

Query: 152 GPWMDTNLALPLGPRRCRVVFDYFLDAHLKDDEAFVGKSLEDSKRVQMED 3
           GPWMDTNL LPLGPR+C+VVFDYFLD  LKDDEAFV +SLE+S RVQMED
Sbjct: 332 GPWMDTNLVLPLGPRKCKVVFDYFLDPSLKDDEAFVKRSLEESDRVQMED 381



 Score = 61.2 bits (147), Expect(2) = 6e-29
 Identities = 28/44 (63%), Positives = 34/44 (77%), Gaps = 6/44 (13%)
 Frame = -3

Query: 262 TVYEKVSIQRCDG------DDFDRLGSKSLYAFIYPNFMVNRLG 149
           T++EKVSIQ C G      D FDRLGS++LYAF+YPNFM+NR G
Sbjct: 289 TIFEKVSIQECGGGSKVGEDGFDRLGSEALYAFVYPNFMINRYG 332


>ref|NP_194718.2| choline monooxygenase [Arabidopsis thaliana]
           gi|20138061|sp|Q9SZR0.2|CHMO_ARATH RecName: Full=Choline
           monooxygenase, chloroplastic; Flags: Precursor
           gi|114050629|gb|ABI49464.1| At4g29890 [Arabidopsis
           thaliana] gi|332660289|gb|AEE85689.1| choline
           monooxygenase [Arabidopsis thaliana]
          Length = 422

 Score = 90.9 bits (224), Expect(2) = 8e-29
 Identities = 40/50 (80%), Positives = 45/50 (90%)
 Frame = -2

Query: 152 GPWMDTNLALPLGPRRCRVVFDYFLDAHLKDDEAFVGKSLEDSKRVQMED 3
           GPWMDTNL LPLGPR+C+VVFDYFLD  LKDDEAF+ +SLE+S RVQMED
Sbjct: 332 GPWMDTNLVLPLGPRKCKVVFDYFLDPSLKDDEAFIKRSLEESDRVQMED 381



 Score = 61.2 bits (147), Expect(2) = 8e-29
 Identities = 28/44 (63%), Positives = 34/44 (77%), Gaps = 6/44 (13%)
 Frame = -3

Query: 262 TVYEKVSIQRCDG------DDFDRLGSKSLYAFIYPNFMVNRLG 149
           T++EKVSIQ C G      D FDRLGS++LYAF+YPNFM+NR G
Sbjct: 289 TIFEKVSIQECGGGSKVGEDGFDRLGSEALYAFVYPNFMINRYG 332


>ref|XP_002308100.1| predicted protein [Populus trichocarpa] gi|222854076|gb|EEE91623.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score = 87.4 bits (215), Expect(2) = 1e-28
 Identities = 36/50 (72%), Positives = 46/50 (92%)
 Frame = -2

Query: 152 GPWMDTNLALPLGPRRCRVVFDYFLDAHLKDDEAFVGKSLEDSKRVQMED 3
           GPWMDTNL LPLGPR+C+V+FDYF++AHLKDD+ F+ +SL DS+RVQ+ED
Sbjct: 318 GPWMDTNLVLPLGPRKCQVIFDYFIEAHLKDDKDFIERSLVDSERVQIED 367



 Score = 64.3 bits (155), Expect(2) = 1e-28
 Identities = 31/42 (73%), Positives = 33/42 (78%), Gaps = 6/42 (14%)
 Frame = -3

Query: 256 YEKVSIQRCDG------DDFDRLGSKSLYAFIYPNFMVNRLG 149
           YEKVSIQ CDG      DD DRLGSK+LYAFIYPNFM+NR G
Sbjct: 277 YEKVSIQSCDGGSTESEDDIDRLGSKALYAFIYPNFMINRYG 318


>pir||T08550 choline monooxygenase (EC 1.1.3.-) precursor - Arabidopsis thaliana
           gi|4914413|emb|CAB43664.1| choline monooxygenase-like
           protein [Arabidopsis thaliana]
           gi|7269888|emb|CAB79747.1| choline monooxygenase-like
           protein [Arabidopsis thaliana]
          Length = 426

 Score = 90.9 bits (224), Expect(2) = 3e-28
 Identities = 40/50 (80%), Positives = 45/50 (90%)
 Frame = -2

Query: 152 GPWMDTNLALPLGPRRCRVVFDYFLDAHLKDDEAFVGKSLEDSKRVQMED 3
           GPWMDTNL LPLGPR+C+VVFDYFLD  LKDDEAF+ +SLE+S RVQMED
Sbjct: 336 GPWMDTNLVLPLGPRKCKVVFDYFLDPSLKDDEAFIKRSLEESDRVQMED 385



 Score = 59.3 bits (142), Expect(2) = 3e-28
 Identities = 27/43 (62%), Positives = 33/43 (76%), Gaps = 6/43 (13%)
 Frame = -3

Query: 259 VYEKVSIQRCDG------DDFDRLGSKSLYAFIYPNFMVNRLG 149
           ++EKVSIQ C G      D FDRLGS++LYAF+YPNFM+NR G
Sbjct: 294 IFEKVSIQECGGGSKVGEDGFDRLGSEALYAFVYPNFMINRYG 336


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