BLASTX nr result

ID: Atractylodes22_contig00004727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004727
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264997.1| PREDICTED: choline monooxygenase, chloroplas...   236   2e-60
dbj|BAC21260.1| choline monooxygenase [Arabidopsis thaliana]          229   2e-58
ref|NP_194718.2| choline monooxygenase [Arabidopsis thaliana] gi...   229   2e-58
ref|XP_002308100.1| predicted protein [Populus trichocarpa] gi|2...   228   3e-58
gb|ACR15118.1| choline monooxygenase [Lycium barbarum]                228   4e-58

>ref|XP_002264997.1| PREDICTED: choline monooxygenase, chloroplastic [Vitis vinifera]
           gi|297735449|emb|CBI17889.3| unnamed protein product
           [Vitis vinifera]
          Length = 441

 Score =  236 bits (601), Expect = 2e-60
 Identities = 107/134 (79%), Positives = 122/134 (91%), Gaps = 6/134 (4%)
 Frame = +2

Query: 2   REYTIECNWKVFCDNYLDGGYHVPFAHKDLASGLKLDSYSTTVYEKVSIQRCDG------ 163
           REYTIECNWKVFCDNYLDGGYHVP+AHK LASGLKL+SYSTT +E+VSIQ C+G      
Sbjct: 266 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLKLESYSTTTFERVSIQSCEGGPGESE 325

Query: 164 DDFDRLGSQSLYAFIYPNFMVNRYGPWMDTNLVLPLGPRRCRVIFDYFLDAHLKDDEAFV 343
           DDFDRLG+++LYAFIYPNFM+NRYGPWMDTNLVLPLGPR C+V+FDYFL+A LKDD+AF+
Sbjct: 326 DDFDRLGTKALYAFIYPNFMINRYGPWMDTNLVLPLGPRTCKVVFDYFLEASLKDDKAFI 385

Query: 344 GKSLEDSERVQMED 385
            +SLEDSERVQMED
Sbjct: 386 ERSLEDSERVQMED 399


>dbj|BAC21260.1| choline monooxygenase [Arabidopsis thaliana]
          Length = 422

 Score =  229 bits (584), Expect = 2e-58
 Identities = 103/134 (76%), Positives = 119/134 (88%), Gaps = 6/134 (4%)
 Frame = +2

Query: 2   REYTIECNWKVFCDNYLDGGYHVPFAHKDLASGLKLDSYSTTVYEKVSIQRCDG------ 163
           REYTI+CNWKVFCDNYLDGGYHVP+AHK L SGL L++YSTT++EKVSIQ C G      
Sbjct: 248 REYTIDCNWKVFCDNYLDGGYHVPYAHKGLMSGLDLETYSTTIFEKVSIQECGGGSKVGE 307

Query: 164 DDFDRLGSQSLYAFIYPNFMVNRYGPWMDTNLVLPLGPRRCRVIFDYFLDAHLKDDEAFV 343
           D FDRLGS++LYAF+YPNFM+NRYGPWMDTNLVLPLGPR+C+V+FDYFLD  LKDDEAFV
Sbjct: 308 DGFDRLGSEALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCKVVFDYFLDPSLKDDEAFV 367

Query: 344 GKSLEDSERVQMED 385
            +SLE+S+RVQMED
Sbjct: 368 KRSLEESDRVQMED 381


>ref|NP_194718.2| choline monooxygenase [Arabidopsis thaliana]
           gi|20138061|sp|Q9SZR0.2|CHMO_ARATH RecName: Full=Choline
           monooxygenase, chloroplastic; Flags: Precursor
           gi|114050629|gb|ABI49464.1| At4g29890 [Arabidopsis
           thaliana] gi|332660289|gb|AEE85689.1| choline
           monooxygenase [Arabidopsis thaliana]
          Length = 422

 Score =  229 bits (583), Expect = 2e-58
 Identities = 102/134 (76%), Positives = 119/134 (88%), Gaps = 6/134 (4%)
 Frame = +2

Query: 2   REYTIECNWKVFCDNYLDGGYHVPFAHKDLASGLKLDSYSTTVYEKVSIQRCDG------ 163
           REYTI+CNWKVFCDNYLDGGYHVP+AHK L SGL L++YSTT++EKVSIQ C G      
Sbjct: 248 REYTIDCNWKVFCDNYLDGGYHVPYAHKGLMSGLDLETYSTTIFEKVSIQECGGGSKVGE 307

Query: 164 DDFDRLGSQSLYAFIYPNFMVNRYGPWMDTNLVLPLGPRRCRVIFDYFLDAHLKDDEAFV 343
           D FDRLGS++LYAF+YPNFM+NRYGPWMDTNLVLPLGPR+C+V+FDYFLD  LKDDEAF+
Sbjct: 308 DGFDRLGSEALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCKVVFDYFLDPSLKDDEAFI 367

Query: 344 GKSLEDSERVQMED 385
            +SLE+S+RVQMED
Sbjct: 368 KRSLEESDRVQMED 381


>ref|XP_002308100.1| predicted protein [Populus trichocarpa] gi|222854076|gb|EEE91623.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  228 bits (582), Expect = 3e-58
 Identities = 105/134 (78%), Positives = 118/134 (88%), Gaps = 6/134 (4%)
 Frame = +2

Query: 2   REYTIECNWKVFCDNYLDGGYHVPFAHKDLASGLKLDSYSTTVYEKVSIQRCDG------ 163
           R Y IECNWKVFCDNYLDGGYHVP+AHK LASGLKL+SYST  YEKVSIQ CDG      
Sbjct: 234 RVYDIECNWKVFCDNYLDGGYHVPYAHKGLASGLKLNSYSTKTYEKVSIQSCDGGSTESE 293

Query: 164 DDFDRLGSQSLYAFIYPNFMVNRYGPWMDTNLVLPLGPRRCRVIFDYFLDAHLKDDEAFV 343
           DD DRLGS++LYAFIYPNFM+NRYGPWMDTNLVLPLGPR+C+VIFDYF++AHLKDD+ F+
Sbjct: 294 DDIDRLGSKALYAFIYPNFMINRYGPWMDTNLVLPLGPRKCQVIFDYFIEAHLKDDKDFI 353

Query: 344 GKSLEDSERVQMED 385
            +SL DSERVQ+ED
Sbjct: 354 ERSLVDSERVQIED 367


>gb|ACR15118.1| choline monooxygenase [Lycium barbarum]
          Length = 427

 Score =  228 bits (581), Expect = 4e-58
 Identities = 104/135 (77%), Positives = 118/135 (87%), Gaps = 7/135 (5%)
 Frame = +2

Query: 2   REYTIECNWKVFCDNYLDGGYHVPFAHKDLASGLKLDSYSTTVYEKVSIQRC-------D 160
           REYT+ECNWKVFCDNYLDGGYHVP+AHKDLASGL LDSYSTT+ EKVSIQRC       D
Sbjct: 251 REYTVECNWKVFCDNYLDGGYHVPYAHKDLASGLTLDSYSTTILEKVSIQRCETGSAERD 310

Query: 161 GDDFDRLGSQSLYAFIYPNFMVNRYGPWMDTNLVLPLGPRRCRVIFDYFLDAHLKDDEAF 340
             +FDRLGS++LYAF+YPNFM+NRYGPWMDTNLVLP GPR+C VIFDYFLDA LK DE+F
Sbjct: 311 DQEFDRLGSKALYAFVYPNFMINRYGPWMDTNLVLPQGPRKCLVIFDYFLDASLKGDESF 370

Query: 341 VGKSLEDSERVQMED 385
           + +SL+DSE VQ+ED
Sbjct: 371 IAQSLQDSETVQIED 385


Top