BLASTX nr result

ID: Atractylodes22_contig00004686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004686
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ38371.1| HMG-protein [Plantago major]                           95   8e-18
ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-l...    92   4e-17
ref|NP_974413.1| high mobility group protein B1 [Arabidopsis tha...    91   9e-17
ref|NP_001190062.1| high mobility group protein B1 [Arabidopsis ...    91   9e-17
ref|XP_002877829.1| hypothetical protein ARALYDRAFT_323737 [Arab...    91   9e-17

>emb|CAJ38371.1| HMG-protein [Plantago major]
          Length = 212

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 48/68 (70%), Positives = 51/68 (75%)
 Frame = -2

Query: 299 RPPSAFFVFLEEFRKTFKKENPTIKAVSAVGKAGGEKWKSMSXXXXXXXXXXXXXXKSEY 120
           RPPSAFFVFLEEFR+TFKKENP IKAVSAVGKAGGEKWKS++              KSEY
Sbjct: 101 RPPSAFFVFLEEFRQTFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEY 160

Query: 119 EKQMTAYN 96
           EK M AYN
Sbjct: 161 EKLMNAYN 168


>ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
           gi|147815135|emb|CAN74566.1| hypothetical protein
           VITISV_023651 [Vitis vinifera]
           gi|297740214|emb|CBI30396.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 46/68 (67%), Positives = 50/68 (73%)
 Frame = -2

Query: 299 RPPSAFFVFLEEFRKTFKKENPTIKAVSAVGKAGGEKWKSMSXXXXXXXXXXXXXXKSEY 120
           RPPSAFFVFLEEFRK FKKENP +KAVSAVGKAGGE+WKS+S              K+EY
Sbjct: 58  RPPSAFFVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEY 117

Query: 119 EKQMTAYN 96
           EK M AYN
Sbjct: 118 EKIMNAYN 125


>ref|NP_974413.1| high mobility group protein B1 [Arabidopsis thaliana]
           gi|222423104|dbj|BAH19531.1| AT3G51880 [Arabidopsis
           thaliana] gi|332645335|gb|AEE78856.1| high mobility
           group protein B1 [Arabidopsis thaliana]
          Length = 185

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 46/68 (67%), Positives = 50/68 (73%)
 Frame = -2

Query: 299 RPPSAFFVFLEEFRKTFKKENPTIKAVSAVGKAGGEKWKSMSXXXXXXXXXXXXXXKSEY 120
           R PSAFFVFLE+FR TFKKENP +KAVSAVGKAGG+KWKSMS              K+EY
Sbjct: 55  RAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEY 114

Query: 119 EKQMTAYN 96
           EKQM AYN
Sbjct: 115 EKQMDAYN 122


>ref|NP_001190062.1| high mobility group protein B1 [Arabidopsis thaliana]
           gi|332645337|gb|AEE78858.1| high mobility group protein
           B1 [Arabidopsis thaliana]
          Length = 161

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 46/68 (67%), Positives = 50/68 (73%)
 Frame = -2

Query: 299 RPPSAFFVFLEEFRKTFKKENPTIKAVSAVGKAGGEKWKSMSXXXXXXXXXXXXXXKSEY 120
           R PSAFFVFLE+FR TFKKENP +KAVSAVGKAGG+KWKSMS              K+EY
Sbjct: 55  RAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEY 114

Query: 119 EKQMTAYN 96
           EKQM AYN
Sbjct: 115 EKQMDAYN 122


>ref|XP_002877829.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
           lyrata] gi|297323667|gb|EFH54088.1| hypothetical protein
           ARALYDRAFT_323737 [Arabidopsis lyrata subsp. lyrata]
          Length = 185

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 46/68 (67%), Positives = 50/68 (73%)
 Frame = -2

Query: 299 RPPSAFFVFLEEFRKTFKKENPTIKAVSAVGKAGGEKWKSMSXXXXXXXXXXXXXXKSEY 120
           R PSAFFVFLE+FR TFKKENP +KAVSAVGKAGG+KWKSMS              K+EY
Sbjct: 55  RAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEY 114

Query: 119 EKQMTAYN 96
           EKQM AYN
Sbjct: 115 EKQMDAYN 122


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