BLASTX nr result

ID: Atractylodes22_contig00004612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004612
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP44392.1| nematode resistance-like protein [Solanum tuberosum]    70   2e-10
gb|AAP44393.1| nematode resistance-like protein [Solanum tuberosum]    69   3e-10
gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]         68   7e-10
gb|AFU75206.1| nematode resistance-like protein, partial [Solanu...    67   2e-09
ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vi...    66   3e-09

>gb|AAP44392.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
 Frame = +3

Query: 72   AGLCLFEKLDLTNCNISE--VPDSIGGLSFLKHIILDENDFTSLPGCXXXXXXXXXXXXX 245
            +GLC   +LDL++C+IS+  +  ++G LS LK ++LD N+F+++P               
Sbjct: 849  SGLCSLIRLDLSDCDISDGGILRNLGFLSSLKVLLLDGNNFSNIPAASISRLTRLKSLAL 908

Query: 246  -GCEKLEVLPELPPSIVFLDVSDCTSLDELQGLFNSDLEEVDLNISGCRQLFRN 404
             GC +LE LPELPPSI  +   DCTSL  +  L    +   D++   C QL +N
Sbjct: 909  RGCGRLESLPELPPSITGIYAHDCTSLMSIDQLTKYPMLS-DVSFRNCHQLVKN 961


>gb|AAP44393.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
 Frame = +3

Query: 72   AGLCLFEKLDLTNCNISE--VPDSIGGLSFLKHIILDENDFTSLPGCXXXXXXXXXXXXX 245
            +GLC    LDL++CNIS+  +  ++G L  L+ +ILD N+F+++P               
Sbjct: 849  SGLCSLIMLDLSDCNISDGGILSNLGFLPSLERLILDGNNFSNIPAASISRLTRLKTLKL 908

Query: 246  -GCEKLEVLPELPPSIVFLDVSDCTSLDELQGLFNSDLEEVDLNISGCRQLFRN 404
             GC +LE LPELPPSI  +  ++CTSL  +  L    +   D +   CRQL +N
Sbjct: 909  LGCGRLESLPELPPSIKGIYANECTSLMSIDQLTKYPMLS-DASFRNCRQLVKN 961


>gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]
          Length = 1136

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
 Frame = +3

Query: 72   AGLCLFEKLDLTNCNISE--VPDSIGGLSFLKHIILDENDFTSLPGCXXXXXXXXXXXXX 245
            +GLC    LDL++CNIS+  + +++G LS L+ +IL+ N+F+++P               
Sbjct: 849  SGLCSLIMLDLSDCNISDGGILNNLGFLSSLEILILNGNNFSNIPAASISRFTRLKRLKL 908

Query: 246  -GCEKLEVLPELPPSIVFLDVSDCTSLDELQGLFNSDLEEVDLNISGCRQLFRN 404
             GC +LE LPELPPSI  +  ++CTSL  +  L    +   D     CRQL +N
Sbjct: 909  HGCGRLESLPELPPSIKGIFANECTSLMSIDQLTKYPMLS-DATFRNCRQLVKN 961


>gb|AFU75206.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
 Frame = +3

Query: 72  AGLCLFEKLDLTNCNISE--VPDSIGGLSFLKHIILDENDFTSLPGCXXXXXXXXXXXXX 245
           +GLC    LDL++CNI++  V  ++G LS LK +ILD N+F ++PG              
Sbjct: 201 SGLCSLIMLDLSDCNITDGGVLSNLGFLSSLKVLILDGNNFFNIPGASISRLTRLKILAL 260

Query: 246 -GCEKLEVLPELPPSIVFLDVSDCTSLDELQGL 341
            GC +LE LPELPPSI  +   DCTSL  +  L
Sbjct: 261 RGCGRLESLPELPPSITGIYAHDCTSLMSIDQL 293


>ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
 Frame = +3

Query: 72   AGLCLFEKLDLTNCNISE--VPDSIGGLSFLKHIILDENDFTSLPGCXXXXXXXXXXXXX 245
            +GL   + L+L++CN+ E  +P  +  LS L+++ LD+N F +LP               
Sbjct: 776  SGLYSLKSLNLSDCNLLEGALPSDLSSLSSLENLYLDKNSFITLPASLSRLSRLRSLTLE 835

Query: 246  GCEKLEVLPELPPSIVFLDVSDCTSLDEL---QGLFNSDLEEVDLNISGCRQLFRN 404
             C+ L  LPELP SI +L+   CTSL+ L      + S L ++  N + C +L  N
Sbjct: 836  HCKSLRSLPELPSSIEYLNAHSCTSLETLSCSSSTYTSKLGDLRFNFTNCFRLGEN 891


Top