BLASTX nr result

ID: Atractylodes22_contig00004572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004572
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519473.1| PREDICTED: ribosomal RNA assembly protein mi...    57   2e-06
ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycin...    57   2e-06
ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putativ...    57   2e-06
gb|AFK40254.1| unknown [Medicago truncatula]                           56   4e-06
ref|XP_003617063.1| KRR1 small subunit processome component-like...    56   4e-06

>ref|XP_003519473.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Glycine max]
          Length = 389

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = -3

Query: 244 SAKKWQERQEKQAEKTAENKRKREEAFKPSK 152
           SAK WQE+QEKQAEKTAENKRKREEAF P K
Sbjct: 297 SAKIWQEKQEKQAEKTAENKRKREEAFIPPK 327


>ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycine max]
           gi|255639399|gb|ACU19995.1| unknown [Glycine max]
          Length = 389

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = -3

Query: 244 SAKKWQERQEKQAEKTAENKRKREEAFKPSK 152
           SAK WQE+QEKQAEKTAENKRKREEAF P K
Sbjct: 297 SAKIWQEKQEKQAEKTAENKRKREEAFIPPK 327


>ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putative [Ricinus communis]
           gi|223547313|gb|EEF48808.1| Ribosomal RNA assembly
           protein mis3, putative [Ricinus communis]
          Length = 377

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/40 (65%), Positives = 30/40 (75%)
 Frame = -3

Query: 241 AKKWQERQEKQAEKTAENKRKREEAFKPSKRFNSDAAGNS 122
           AKKWQE+QE+QAEKTAENKRKR+ AF P +      AG S
Sbjct: 285 AKKWQEKQERQAEKTAENKRKRDTAFVPPEEHRDQDAGKS 324


>gb|AFK40254.1| unknown [Medicago truncatula]
          Length = 380

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = -3

Query: 244 SAKKWQERQEKQAEKTAENKRKREEAFKPSKRFNSDAAGNS 122
           SAKKWQERQ +QAEKTAENKRKR+E+F P K   ++  GNS
Sbjct: 288 SAKKWQERQVQQAEKTAENKRKRDESFVPPKE-PANLVGNS 327


>ref|XP_003617063.1| KRR1 small subunit processome component-like protein [Medicago
           truncatula] gi|355518398|gb|AET00022.1| KRR1 small
           subunit processome component-like protein [Medicago
           truncatula]
          Length = 424

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = -3

Query: 244 SAKKWQERQEKQAEKTAENKRKREEAFKPSKRFNSDAAGNS 122
           SAKKWQERQ +QAEKTAENKRKR+E+F P K   ++  GNS
Sbjct: 332 SAKKWQERQVQQAEKTAENKRKRDESFVPPKE-PANLVGNS 371


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