BLASTX nr result
ID: Atractylodes22_contig00004535
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00004535
(811 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi... 93 5e-32
emb|CAN63349.1| hypothetical protein VITISV_024448 [Vitis vinifera] 93 9e-32
ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containi... 94 4e-31
ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containi... 94 4e-31
ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-29
>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 92.8 bits (229), Expect(2) = 5e-32
Identities = 43/70 (61%), Positives = 55/70 (78%)
Frame = +3
Query: 600 CHHGWDQEAVSILRNLENSQHCRPDIQSYNPLLKLCFRTGKTDVWLGNLLD*MVNKRHLS 779
CHH +Q+A+++LR +ENS C+PDIQ+Y P+LK CF+TGK D L N LD MVNK HLS
Sbjct: 367 CHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDS-LSNFLDDMVNKHHLS 425
Query: 780 LDLTTYTLLI 809
LD++ YTLLI
Sbjct: 426 LDVSAYTLLI 435
Score = 71.6 bits (174), Expect(2) = 5e-32
Identities = 43/91 (47%), Positives = 53/91 (58%)
Frame = +1
Query: 328 GYTPLSESYEMMMGILGKMEKMRALVEQMRQHHLVTIDSIAKVMRRFYNALIHTLARAGR 507
G P +Y +M L K+E+ ++ + V K FYNALIHTL RAG+
Sbjct: 280 GCAPNVVTYTTIMCSLTKVEQFEEALQIAERMRSVG----CKPDTLFYNALIHTLGRAGQ 335
Query: 508 LQEVLNVFEVEMPSFGVVTNTSTYNSMIATF 600
L+E + VFEVEMP GV NTSTYNSMIA F
Sbjct: 336 LREAVRVFEVEMPKTGVPPNTSTYNSMIAMF 366
Score = 72.4 bits (176), Expect(2) = 9e-25
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Frame = +1
Query: 295 LEVFRWA*SSPGYTPLSESYEMMMGILGKM---EKMRALVEQMRQHHLVTIDSIAKVMRR 465
L +FRWA S GY E+Y+MM+ ILGK+ +KMRAL+E+MRQ +LV + ++AK MRR
Sbjct: 96 LGLFRWAESRLGYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQGNLVRLSTVAKAMRR 155
Query: 466 FYNALIHTLARAGRLQEVLNVFEVEMPSFGVVTNTSTYNSMIAT 597
LA AG ++ + VF+ ++ +F + NT + N ++ T
Sbjct: 156 --------LAGAGEWEDAVRVFD-DLGNFELEKNTESMNLLLDT 190
Score = 67.8 bits (164), Expect(2) = 9e-25
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = +2
Query: 134 CVGSPGNIDFVIAKVQAGGTDDGIFQSLLHDQACSAIPVSHELVCQLLRRFKDDWK 301
C+ S ID ++++++ G +DD +F+SL+HD+AC+AIP+S LV LL RFKDDWK
Sbjct: 40 CIRS--QIDIIVSRIREGSSDDEVFKSLVHDEACNAIPMSQNLVDVLLHRFKDDWK 93
>emb|CAN63349.1| hypothetical protein VITISV_024448 [Vitis vinifera]
Length = 324
Score = 92.8 bits (229), Expect(2) = 9e-32
Identities = 43/70 (61%), Positives = 55/70 (78%)
Frame = +3
Query: 600 CHHGWDQEAVSILRNLENSQHCRPDIQSYNPLLKLCFRTGKTDVWLGNLLD*MVNKRHLS 779
CHH +Q+A+++LR +ENS C+PDIQ+Y P+LK CF+TGK D L N LD MVNK HLS
Sbjct: 57 CHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDS-LSNFLDDMVNKHHLS 115
Query: 780 LDLTTYTLLI 809
LD++ YTLLI
Sbjct: 116 LDVSAYTLLI 125
Score = 70.9 bits (172), Expect(2) = 9e-32
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +1
Query: 466 FYNALIHTLARAGRLQEVLNVFEVEMPSFGVVTNTSTYNSMIATF 600
FYNALIHTL RAG+L+E ++VFEVEMP GV NTSTYNSMIA F
Sbjct: 12 FYNALIHTLGRAGQLREAVHVFEVEMPKTGVPPNTSTYNSMIAMF 56
>ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 93.6 bits (231), Expect(2) = 4e-31
Identities = 40/70 (57%), Positives = 55/70 (78%)
Frame = +3
Query: 600 CHHGWDQEAVSILRNLENSQHCRPDIQSYNPLLKLCFRTGKTDVWLGNLLD*MVNKRHLS 779
C +++A+ +L ++ S+HC+PD+Q+Y PLLK CFRTGKTD L NLLD M+NK HLS
Sbjct: 393 CRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLS 452
Query: 780 LDLTTYTLLI 809
LD++TY+LLI
Sbjct: 453 LDISTYSLLI 462
Score = 67.8 bits (164), Expect(2) = 4e-31
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +1
Query: 466 FYNALIHTLARAGRLQEVLNVFEVEMPSFGVVTNTSTYNSMIATF 600
FYN LIHTL RAG+++E ++VFEVEMPS V+ NTSTYNSMIA +
Sbjct: 348 FYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMY 392
Score = 72.0 bits (175), Expect(2) = 4e-24
Identities = 31/50 (62%), Positives = 42/50 (84%)
Frame = +2
Query: 152 NIDFVIAKVQAGGTDDGIFQSLLHDQACSAIPVSHELVCQLLRRFKDDWK 301
+IDF+IAKVQ G ++D +FQSLL D C++I +SH+LV +LL+RFKDDWK
Sbjct: 70 DIDFIIAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWK 119
Score = 65.9 bits (159), Expect(2) = 4e-24
Identities = 36/104 (34%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Frame = +1
Query: 295 LEVFRWA*SSPGYTPLSESYEMMMGILGKME---KMRALVEQMRQHHLVTIDSIAKVMRR 465
L VFRWA S G+ + Y++++ LGK + KMR ++E+M++ LVT+D++AK MRR
Sbjct: 122 LGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMRR 181
Query: 466 FYNALIHTLARAGRLQEVLNVFEVEMPSFGVVTNTSTYNSMIAT 597
F A AG+ + + +F+ ++ ++G+ NT + N ++ T
Sbjct: 182 F--------AGAGQWENAVRIFD-DLETYGLEKNTESMNVLLDT 216
>ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 488
Score = 93.6 bits (231), Expect(2) = 4e-31
Identities = 40/70 (57%), Positives = 55/70 (78%)
Frame = +3
Query: 600 CHHGWDQEAVSILRNLENSQHCRPDIQSYNPLLKLCFRTGKTDVWLGNLLD*MVNKRHLS 779
C +++A+ +L ++ S+HC+PD+Q+Y PLLK CFRTGKTD L NLLD M+NK HLS
Sbjct: 362 CRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLS 421
Query: 780 LDLTTYTLLI 809
LD++TY+LLI
Sbjct: 422 LDISTYSLLI 431
Score = 67.8 bits (164), Expect(2) = 4e-31
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +1
Query: 466 FYNALIHTLARAGRLQEVLNVFEVEMPSFGVVTNTSTYNSMIATF 600
FYN LIHTL RAG+++E ++VFEVEMPS V+ NTSTYNSMIA +
Sbjct: 317 FYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMY 361
Score = 72.0 bits (175), Expect(2) = 4e-24
Identities = 31/50 (62%), Positives = 42/50 (84%)
Frame = +2
Query: 152 NIDFVIAKVQAGGTDDGIFQSLLHDQACSAIPVSHELVCQLLRRFKDDWK 301
+IDF+IAKVQ G ++D +FQSLL D C++I +SH+LV +LL+RFKDDWK
Sbjct: 39 DIDFIIAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWK 88
Score = 65.9 bits (159), Expect(2) = 4e-24
Identities = 36/104 (34%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Frame = +1
Query: 295 LEVFRWA*SSPGYTPLSESYEMMMGILGKME---KMRALVEQMRQHHLVTIDSIAKVMRR 465
L VFRWA S G+ + Y++++ LGK + KMR ++E+M++ LVT+D++AK MRR
Sbjct: 91 LGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMRR 150
Query: 466 FYNALIHTLARAGRLQEVLNVFEVEMPSFGVVTNTSTYNSMIAT 597
F A AG+ + + +F+ ++ ++G+ NT + N ++ T
Sbjct: 151 F--------AGAGQWENAVRIFD-DLETYGLEKNTESMNVLLDT 185
>ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 89.0 bits (219), Expect(2) = 2e-29
Identities = 39/70 (55%), Positives = 55/70 (78%)
Frame = +3
Query: 600 CHHGWDQEAVSILRNLENSQHCRPDIQSYNPLLKLCFRTGKTDVWLGNLLD*MVNKRHLS 779
C+H ++ A+ IL+ +ENS C+PD Q+Y+PL+K CFR+GK D L +L+ M+NK+HLS
Sbjct: 364 CYHAQEKRALEILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQHLS 423
Query: 780 LDLTTYTLLI 809
LDL+TYTLLI
Sbjct: 424 LDLSTYTLLI 433
Score = 66.6 bits (161), Expect(2) = 2e-29
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +1
Query: 349 SYEMMMGILGKMEKMRALV---EQMRQHHLVTIDSIAKVMRRFYNALIHTLARAGRLQEV 519
+Y +M LGK +K + E+MR S + F+N+LIHTL RAGRL +
Sbjct: 284 TYTSIMCALGKAKKFEEALKVPERMRS-------SGCRPDTLFFNSLIHTLGRAGRLDDA 336
Query: 520 LNVFEVEMPSFGVVTNTSTYNSMIATF 600
+VF+VEMP GV NTSTYNSMI+ F
Sbjct: 337 ADVFKVEMPKAGVSPNTSTYNSMISMF 363
Score = 71.2 bits (173), Expect(2) = 1e-19
Identities = 41/104 (39%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Frame = +1
Query: 295 LEVFRWA*SSPGYTPLSESYEMMMGILGK---MEKMRALVEQMRQHHLVTIDSIAKVMRR 465
L VFRWA S P + SESY+MM+ ILG+ MEK+R L+E+MR+ LV ++++AK MRR
Sbjct: 93 LGVFRWASSRPSFRHSSESYDMMVDILGRMKVMEKLRDLLEEMREGGLVNMNTVAKAMRR 152
Query: 466 FYNALIHTLARAGRLQEVLNVFEVEMPSFGVVTNTSTYNSMIAT 597
F AG+ + + +F+ ++ + G+ NT + N ++ T
Sbjct: 153 FVG--------AGQWVDAVRIFD-DLQALGLEKNTESMNLLLDT 187
Score = 51.6 bits (122), Expect(2) = 1e-19
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +2
Query: 155 IDFVIAKVQAGGTDDGIFQSLLHDQACSAIPVSHELVCQLLRRFKDDWK 301
+D + AK+ G +++ +L +DQAC IP+S +LV +LL R+KDDWK
Sbjct: 42 VDILTAKLGKGSSEEETLHTLFNDQACDFIPLSRDLVHRLLWRYKDDWK 90