BLASTX nr result
ID: Atractylodes22_contig00004534
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00004534
(633 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-27
emb|CAN63349.1| hypothetical protein VITISV_024448 [Vitis vinifera] 75 1e-26
ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containi... 78 4e-26
ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containi... 78 4e-26
ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-23
>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 75.1 bits (183), Expect(2) = 7e-27
Identities = 33/57 (57%), Positives = 45/57 (78%)
Frame = +3
Query: 411 FCHHGRD*EAVSILRNLENSQHCRPDIQSYNPLLKLCFRTGKTDVWLGNLLDEMVNK 581
FCHH ++ +A+++LR +ENS C+PDIQ+Y P+LK CF+TGK D L N LD+MVNK
Sbjct: 366 FCHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDS-LSNFLDDMVNK 421
Score = 71.2 bits (173), Expect(2) = 7e-27
Identities = 45/94 (47%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +1
Query: 142 GYTPLSESYEMMVDILGKMEKIRA---LVEQMRQHHLVTIGSIAKVMRRFYNALIHTLER 312
G P +Y ++ L K+E+ + E+MR ++G K FYNALIHTL R
Sbjct: 280 GCAPNVVTYTTIMCSLTKVEQFEEALQIAERMR-----SVG--CKPDTLFYNALIHTLGR 332
Query: 313 AGRLQEVLNVFEVEMPSFGVGTNTSTYNSMIAVF 414
AG+L+E + VFEVEMP GV NTSTYNSMIA+F
Sbjct: 333 AGQLREAVRVFEVEMPKTGVPPNTSTYNSMIAMF 366
Score = 75.1 bits (183), Expect(2) = 1e-20
Identities = 43/102 (42%), Positives = 66/102 (64%), Gaps = 3/102 (2%)
Frame = +1
Query: 109 LEVFRWAESSPGYTPLSESYEMMVDILGKM---EKIRALVEQMRQHHLVTIGSIAKVMRR 279
L +FRWAES GY E+Y+MMVDILGK+ +K+RAL+E+MRQ +LV + ++AK MRR
Sbjct: 96 LGLFRWAESRLGYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQGNLVRLSTVAKAMRR 155
Query: 280 FYNALIHTLERAGRLQEVLNVFEVEMPSFGVGTNTSTYNSMI 405
L AG ++ + VF+ ++ +F + NT + N ++
Sbjct: 156 --------LAGAGEWEDAVRVFD-DLGNFELEKNTESMNLLL 188
Score = 50.4 bits (119), Expect(2) = 1e-20
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +2
Query: 5 TDDGIFQSLLHDQACSAMPVSHVLVCQLLCLFKDDWK 115
+DD +F+SL+HD+AC+A+P+S LV LL FKDDWK
Sbjct: 57 SDDEVFKSLVHDEACNAIPMSQNLVDVLLHRFKDDWK 93
>emb|CAN63349.1| hypothetical protein VITISV_024448 [Vitis vinifera]
Length = 324
Score = 75.1 bits (183), Expect(2) = 1e-26
Identities = 33/57 (57%), Positives = 45/57 (78%)
Frame = +3
Query: 411 FCHHGRD*EAVSILRNLENSQHCRPDIQSYNPLLKLCFRTGKTDVWLGNLLDEMVNK 581
FCHH ++ +A+++LR +ENS C+PDIQ+Y P+LK CF+TGK D L N LD+MVNK
Sbjct: 56 FCHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDS-LSNFLDDMVNK 111
Score = 70.9 bits (172), Expect(2) = 1e-26
Identities = 34/45 (75%), Positives = 39/45 (86%)
Frame = +1
Query: 280 FYNALIHTLERAGRLQEVLNVFEVEMPSFGVGTNTSTYNSMIAVF 414
FYNALIHTL RAG+L+E ++VFEVEMP GV NTSTYNSMIA+F
Sbjct: 12 FYNALIHTLGRAGQLREAVHVFEVEMPKTGVPPNTSTYNSMIAMF 56
>ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 78.2 bits (191), Expect(2) = 4e-26
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = +3
Query: 411 FCHHGRD*EAVSILRNLENSQHCRPDIQSYNPLLKLCFRTGKTDVWLGNLLDEMVNK 581
+C R+ +A+ +L ++ S+HC+PD+Q+Y PLLK CFRTGKTD L NLLDEM+NK
Sbjct: 392 YCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINK 448
Score = 65.9 bits (159), Expect(2) = 4e-26
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +1
Query: 280 FYNALIHTLERAGRLQEVLNVFEVEMPSFGVGTNTSTYNSMIAVF 414
FYN LIHTL RAG+++E ++VFEVEMPS V NTSTYNSMIA++
Sbjct: 348 FYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMY 392
Score = 65.9 bits (159), Expect(2) = 1e-16
Identities = 34/102 (33%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Frame = +1
Query: 109 LEVFRWAESSPGYTPLSESYEMMVDILGK---MEKIRALVEQMRQHHLVTIGSIAKVMRR 279
L VFRWAES G+ + Y++++D LGK + K+R ++E+M++ LVT+ ++AK MRR
Sbjct: 122 LGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMRR 181
Query: 280 FYNALIHTLERAGRLQEVLNVFEVEMPSFGVGTNTSTYNSMI 405
F AG+ + + +F+ ++ ++G+ NT + N ++
Sbjct: 182 FAG--------AGQWENAVRIFD-DLETYGLEKNTESMNVLL 214
Score = 46.2 bits (108), Expect(2) = 1e-16
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +2
Query: 5 TDDGIFQSLLHDQACSAMPVSHVLVCQLLCLFKDDWK 115
++D +FQSLL D C+++ +SH LV +LL FKDDWK
Sbjct: 83 SEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWK 119
>ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 488
Score = 78.2 bits (191), Expect(2) = 4e-26
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = +3
Query: 411 FCHHGRD*EAVSILRNLENSQHCRPDIQSYNPLLKLCFRTGKTDVWLGNLLDEMVNK 581
+C R+ +A+ +L ++ S+HC+PD+Q+Y PLLK CFRTGKTD L NLLDEM+NK
Sbjct: 361 YCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINK 417
Score = 65.9 bits (159), Expect(2) = 4e-26
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +1
Query: 280 FYNALIHTLERAGRLQEVLNVFEVEMPSFGVGTNTSTYNSMIAVF 414
FYN LIHTL RAG+++E ++VFEVEMPS V NTSTYNSMIA++
Sbjct: 317 FYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMY 361
Score = 65.9 bits (159), Expect(2) = 1e-16
Identities = 34/102 (33%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Frame = +1
Query: 109 LEVFRWAESSPGYTPLSESYEMMVDILGK---MEKIRALVEQMRQHHLVTIGSIAKVMRR 279
L VFRWAES G+ + Y++++D LGK + K+R ++E+M++ LVT+ ++AK MRR
Sbjct: 91 LGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMRR 150
Query: 280 FYNALIHTLERAGRLQEVLNVFEVEMPSFGVGTNTSTYNSMI 405
F AG+ + + +F+ ++ ++G+ NT + N ++
Sbjct: 151 FAG--------AGQWENAVRIFD-DLETYGLEKNTESMNVLL 183
Score = 46.2 bits (108), Expect(2) = 1e-16
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +2
Query: 5 TDDGIFQSLLHDQACSAMPVSHVLVCQLLCLFKDDWK 115
++D +FQSLL D C+++ +SH LV +LL FKDDWK
Sbjct: 52 SEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWK 88
>ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 69.7 bits (169), Expect(2) = 1e-23
Identities = 28/58 (48%), Positives = 44/58 (75%)
Frame = +3
Query: 411 FCHHGRD*EAVSILRNLENSQHCRPDIQSYNPLLKLCFRTGKTDVWLGNLLDEMVNKR 584
FC+H ++ A+ IL+ +ENS C+PD Q+Y+PL+K CFR+GK D L +L++M+NK+
Sbjct: 363 FCYHAQEKRALEILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQ 420
Score = 65.9 bits (159), Expect(2) = 1e-23
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = +1
Query: 163 SYEMMVDILGKMEKIRALV---EQMRQHHLVTIGSIAKVMRRFYNALIHTLERAGRLQEV 333
+Y ++ LGK +K + E+MR S + F+N+LIHTL RAGRL +
Sbjct: 284 TYTSIMCALGKAKKFEEALKVPERMRS-------SGCRPDTLFFNSLIHTLGRAGRLDDA 336
Query: 334 LNVFEVEMPSFGVGTNTSTYNSMIAVF 414
+VF+VEMP GV NTSTYNSMI++F
Sbjct: 337 ADVFKVEMPKAGVSPNTSTYNSMISMF 363
Score = 75.1 bits (183), Expect(2) = 7e-17
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
Frame = +1
Query: 109 LEVFRWAESSPGYTPLSESYEMMVDILGK---MEKIRALVEQMRQHHLVTIGSIAKVMRR 279
L VFRWA S P + SESY+MMVDILG+ MEK+R L+E+MR+ LV + ++AK MRR
Sbjct: 93 LGVFRWASSRPSFRHSSESYDMMVDILGRMKVMEKLRDLLEEMREGGLVNMNTVAKAMRR 152
Query: 280 FYNALIHTLERAGRLQEVLNVFEVEMPSFGVGTNTSTYNSMI 405
F AG+ + + +F+ ++ + G+ NT + N ++
Sbjct: 153 FVG--------AGQWVDAVRIFD-DLQALGLEKNTESMNLLL 185
Score = 37.7 bits (86), Expect(2) = 7e-17
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 5 TDDGIFQSLLHDQACSAMPVSHVLVCQLLCLFKDDWK 115
+++ +L +DQAC +P+S LV +LL +KDDWK
Sbjct: 54 SEEETLHTLFNDQACDFIPLSRDLVHRLLWRYKDDWK 90