BLASTX nr result
ID: Atractylodes22_contig00004507
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00004507 (431 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro... 194 6e-48 ref|NP_178124.2| Pre-mRNA-processing-splicing factor [Arabidopsi... 194 6e-48 ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact... 194 6e-48 ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing fact... 194 6e-48 ref|XP_003542119.1| PREDICTED: pre-mRNA-processing-splicing fact... 194 6e-48 >ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor 8-like [Cucumis sativus] Length = 2347 Score = 194 bits (493), Expect = 6e-48 Identities = 105/143 (73%), Positives = 109/143 (76%) Frame = +2 Query: 2 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQAKQIIVTRKGILDPLEVHLLDFPNIII 181 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQ KQIIVTRKG+LDPLEVHLLDFPNI+I Sbjct: 1837 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVI 1896 Query: 182 KGSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGDLILKTSEPQMVLFNIYDDWLK 361 KGSEL FGDLILK +EPQMVLFNIYDDWLK Sbjct: 1897 KGSEL-------------------QLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLK 1937 Query: 362 SIISYTAFSRLILILQALHVNNE 430 SI SYTAFSRLILIL+ALHVNNE Sbjct: 1938 SISSYTAFSRLILILRALHVNNE 1960 >ref|NP_178124.2| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gi|5902365|gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gi|332198232|gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] Length = 2359 Score = 194 bits (493), Expect = 6e-48 Identities = 105/143 (73%), Positives = 109/143 (76%) Frame = +2 Query: 2 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQAKQIIVTRKGILDPLEVHLLDFPNIII 181 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQ KQIIVTRKG+LDPLEVHLLDFPNI+I Sbjct: 1849 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVI 1908 Query: 182 KGSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGDLILKTSEPQMVLFNIYDDWLK 361 KGSEL FGDLILK +EPQMVLFNIYDDWLK Sbjct: 1909 KGSEL-------------------QLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLK 1949 Query: 362 SIISYTAFSRLILILQALHVNNE 430 SI SYTAFSRLILIL+ALHVNNE Sbjct: 1950 SISSYTAFSRLILILRALHVNNE 1972 >ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1 [Vitis vinifera] Length = 2367 Score = 194 bits (493), Expect = 6e-48 Identities = 105/143 (73%), Positives = 109/143 (76%) Frame = +2 Query: 2 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQAKQIIVTRKGILDPLEVHLLDFPNIII 181 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQ KQIIVTRKG+LDPLEVHLLDFPNI+I Sbjct: 1857 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVI 1916 Query: 182 KGSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGDLILKTSEPQMVLFNIYDDWLK 361 KGSEL FGDLILK +EPQMVLFNIYDDWLK Sbjct: 1917 KGSEL-------------------QLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLK 1957 Query: 362 SIISYTAFSRLILILQALHVNNE 430 SI SYTAFSRLILIL+ALHVNNE Sbjct: 1958 SISSYTAFSRLILILRALHVNNE 1980 >ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Glycine max] Length = 2358 Score = 194 bits (493), Expect = 6e-48 Identities = 105/143 (73%), Positives = 109/143 (76%) Frame = +2 Query: 2 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQAKQIIVTRKGILDPLEVHLLDFPNIII 181 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQ KQIIVTRKG+LDPLEVHLLDFPNI+I Sbjct: 1847 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVI 1906 Query: 182 KGSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGDLILKTSEPQMVLFNIYDDWLK 361 KGSEL FGDLILK +EPQMVLFNIYDDWLK Sbjct: 1907 KGSEL-------------------QLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLK 1947 Query: 362 SIISYTAFSRLILILQALHVNNE 430 SI SYTAFSRLILIL+ALHVNNE Sbjct: 1948 SISSYTAFSRLILILRALHVNNE 1970 >ref|XP_003542119.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Glycine max] Length = 2358 Score = 194 bits (493), Expect = 6e-48 Identities = 105/143 (73%), Positives = 109/143 (76%) Frame = +2 Query: 2 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQAKQIIVTRKGILDPLEVHLLDFPNIII 181 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQ KQIIVTRKG+LDPLEVHLLDFPNI+I Sbjct: 1847 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVI 1906 Query: 182 KGSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGDLILKTSEPQMVLFNIYDDWLK 361 KGSEL FGDLILK +EPQMVLFNIYDDWLK Sbjct: 1907 KGSEL-------------------QLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLK 1947 Query: 362 SIISYTAFSRLILILQALHVNNE 430 SI SYTAFSRLILIL+ALHVNNE Sbjct: 1948 SISSYTAFSRLILILRALHVNNE 1970