BLASTX nr result

ID: Atractylodes22_contig00004507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004507
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...   194   6e-48
ref|NP_178124.2| Pre-mRNA-processing-splicing factor [Arabidopsi...   194   6e-48
ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact...   194   6e-48
ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing fact...   194   6e-48
ref|XP_003542119.1| PREDICTED: pre-mRNA-processing-splicing fact...   194   6e-48

>ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor
            8-like [Cucumis sativus]
          Length = 2347

 Score =  194 bits (493), Expect = 6e-48
 Identities = 105/143 (73%), Positives = 109/143 (76%)
 Frame = +2

Query: 2    SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQAKQIIVTRKGILDPLEVHLLDFPNIII 181
            SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQ KQIIVTRKG+LDPLEVHLLDFPNI+I
Sbjct: 1837 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVI 1896

Query: 182  KGSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGDLILKTSEPQMVLFNIYDDWLK 361
            KGSEL                               FGDLILK +EPQMVLFNIYDDWLK
Sbjct: 1897 KGSEL-------------------QLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLK 1937

Query: 362  SIISYTAFSRLILILQALHVNNE 430
            SI SYTAFSRLILIL+ALHVNNE
Sbjct: 1938 SISSYTAFSRLILILRALHVNNE 1960


>ref|NP_178124.2| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana]
            gi|5902365|gb|AAD55467.1|AC009322_7 Putative splicing
            factor Prp8 [Arabidopsis thaliana]
            gi|332198232|gb|AEE36353.1| Pre-mRNA-processing-splicing
            factor [Arabidopsis thaliana]
          Length = 2359

 Score =  194 bits (493), Expect = 6e-48
 Identities = 105/143 (73%), Positives = 109/143 (76%)
 Frame = +2

Query: 2    SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQAKQIIVTRKGILDPLEVHLLDFPNIII 181
            SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQ KQIIVTRKG+LDPLEVHLLDFPNI+I
Sbjct: 1849 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVI 1908

Query: 182  KGSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGDLILKTSEPQMVLFNIYDDWLK 361
            KGSEL                               FGDLILK +EPQMVLFNIYDDWLK
Sbjct: 1909 KGSEL-------------------QLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLK 1949

Query: 362  SIISYTAFSRLILILQALHVNNE 430
            SI SYTAFSRLILIL+ALHVNNE
Sbjct: 1950 SISSYTAFSRLILILRALHVNNE 1972


>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
            [Vitis vinifera]
          Length = 2367

 Score =  194 bits (493), Expect = 6e-48
 Identities = 105/143 (73%), Positives = 109/143 (76%)
 Frame = +2

Query: 2    SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQAKQIIVTRKGILDPLEVHLLDFPNIII 181
            SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQ KQIIVTRKG+LDPLEVHLLDFPNI+I
Sbjct: 1857 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVI 1916

Query: 182  KGSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGDLILKTSEPQMVLFNIYDDWLK 361
            KGSEL                               FGDLILK +EPQMVLFNIYDDWLK
Sbjct: 1917 KGSEL-------------------QLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLK 1957

Query: 362  SIISYTAFSRLILILQALHVNNE 430
            SI SYTAFSRLILIL+ALHVNNE
Sbjct: 1958 SISSYTAFSRLILILRALHVNNE 1980


>ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Glycine max]
          Length = 2358

 Score =  194 bits (493), Expect = 6e-48
 Identities = 105/143 (73%), Positives = 109/143 (76%)
 Frame = +2

Query: 2    SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQAKQIIVTRKGILDPLEVHLLDFPNIII 181
            SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQ KQIIVTRKG+LDPLEVHLLDFPNI+I
Sbjct: 1847 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVI 1906

Query: 182  KGSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGDLILKTSEPQMVLFNIYDDWLK 361
            KGSEL                               FGDLILK +EPQMVLFNIYDDWLK
Sbjct: 1907 KGSEL-------------------QLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLK 1947

Query: 362  SIISYTAFSRLILILQALHVNNE 430
            SI SYTAFSRLILIL+ALHVNNE
Sbjct: 1948 SISSYTAFSRLILILRALHVNNE 1970


>ref|XP_003542119.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Glycine max]
          Length = 2358

 Score =  194 bits (493), Expect = 6e-48
 Identities = 105/143 (73%), Positives = 109/143 (76%)
 Frame = +2

Query: 2    SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQAKQIIVTRKGILDPLEVHLLDFPNIII 181
            SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQ KQIIVTRKG+LDPLEVHLLDFPNI+I
Sbjct: 1847 SVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVI 1906

Query: 182  KGSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGDLILKTSEPQMVLFNIYDDWLK 361
            KGSEL                               FGDLILK +EPQMVLFNIYDDWLK
Sbjct: 1907 KGSEL-------------------QLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLK 1947

Query: 362  SIISYTAFSRLILILQALHVNNE 430
            SI SYTAFSRLILIL+ALHVNNE
Sbjct: 1948 SISSYTAFSRLILILRALHVNNE 1970


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