BLASTX nr result

ID: Atractylodes22_contig00004504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004504
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282901.1| PREDICTED: sec-independent protein transloca...   375   e-101
ref|XP_004135073.1| PREDICTED: sec-independent protein transloca...   372   e-100
emb|CAN69811.1| hypothetical protein VITISV_043107 [Vitis vinifera]   372   e-100
ref|XP_003536657.1| PREDICTED: sec-independent protein transloca...   369   e-100
ref|XP_004159288.1| PREDICTED: sec-independent protein transloca...   368   2e-99

>ref|XP_002282901.1| PREDICTED: sec-independent protein translocase protein TatC [Vitis
            vinifera] gi|297737744|emb|CBI26945.3| unnamed protein
            product [Vitis vinifera]
          Length = 352

 Score =  375 bits (962), Expect = e-101
 Identities = 208/354 (58%), Positives = 244/354 (68%), Gaps = 6/354 (1%)
 Frame = +2

Query: 74   MASAKVFVNLQLNTNSCF-NCVSSTTNHSNYLQINQRKT--YLSVSNKRQNKVNRVVCFA 244
            M S   F +L    N CF N +    +H   LQI++R+   +      R    + +VC A
Sbjct: 1    MGSTSGFFSLLRINNCCFFNQLHPIRHHKPPLQIHRRRAPGFGPSQRLRLRNFSTLVCSA 60

Query: 245  LED-VRDMQKRLGIGGGGAIVEDKQKVADEIKEDTQVNSDPEK--GALYNFLYPDKELLP 415
            +ED  RD Q++LG GG G+IVE++  VA++  EDT  N D +K    LY+FLYP KELLP
Sbjct: 61   VEDDARDKQQQLG-GGVGSIVEERP-VAEDSGEDTLQNVDQDKKENGLYDFLYPSKELLP 118

Query: 416  EDKEMSIFDHLEELRERVFVSVLAVGAAIMGCFVYSKDLIMILEAPVRTQGVRFLQLAPG 595
            +DKEMSIFDHLEELR+R+FVSVLAVGAA++G F +SK+L+MILEAPV+ QGVRFLQLAPG
Sbjct: 119  DDKEMSIFDHLEELRQRIFVSVLAVGAAMLGSFAFSKELVMILEAPVKEQGVRFLQLAPG 178

Query: 596  EFFFTTIKVSGYCGILLGSPVILYEIIAFILPGLTKSERKFLAPIVLGSSILFYAGIAFS 775
            EFFFTT+KVSGYCG+LLGSP+ILYEIIAF+LPGLTK+ER FL PIVLGSS+LFYAGI FS
Sbjct: 179  EFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTKAERMFLGPIVLGSSVLFYAGIIFS 238

Query: 776  YSVLTPAALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFXXXXXXXXXXXXXXXX 955
            YS+LTPAALNFFV YAEG VESLWSIDQYFEFV VLMFSTGLSF                
Sbjct: 239  YSILTPAALNFFVNYAEGAVESLWSIDQYFEFVFVLMFSTGLSFQVPVIQLLLGQVGVVS 298

Query: 956  XXXMLSIWRYXXXXXXXXXXXXTPSTDPXXXXXXXXXXXXXXXXXAWTVKLIGR 1117
               MLSIWRY            TPSTDP                 AW VKL+GR
Sbjct: 299  GDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAGPLLGLYLGGAWMVKLMGR 352


>ref|XP_004135073.1| PREDICTED: sec-independent protein translocase protein TATC,
            chloroplastic-like [Cucumis sativus]
          Length = 347

 Score =  372 bits (955), Expect = e-100
 Identities = 196/304 (64%), Positives = 221/304 (72%), Gaps = 1/304 (0%)
 Frame = +2

Query: 209  RQNKVNRVVCFALED-VRDMQKRLGIGGGGAIVEDKQKVADEIKEDTQVNSDPEKGALYN 385
            R+   NR VC A++D VR+ Q  LG G G  +VED   V D  K  T  N  P+K  +YN
Sbjct: 49   RRRNFNRFVCSAVDDDVREKQTELGGGNGSTVVED---VPDIAKNST--NGAPDKSDIYN 103

Query: 386  FLYPDKELLPEDKEMSIFDHLEELRERVFVSVLAVGAAIMGCFVYSKDLIMILEAPVRTQ 565
            FLYP K+LLP+D+EMS+FDHLEELR+R+FVSVLAVGAAI+GCF +SKDLI++LEAPV+ Q
Sbjct: 104  FLYPSKDLLPDDREMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQ 163

Query: 566  GVRFLQLAPGEFFFTTIKVSGYCGILLGSPVILYEIIAFILPGLTKSERKFLAPIVLGSS 745
            GVRFLQL PGEFFFTT+KVSGYCG+LLGSPVILYEIIAF+LPGLT++ER+FLAPIVLGSS
Sbjct: 164  GVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSS 223

Query: 746  ILFYAGIAFSYSVLTPAALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFXXXXXX 925
            ILFYAGIAFSY VLTPAALNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSF      
Sbjct: 224  ILFYAGIAFSYVVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ 283

Query: 926  XXXXXXXXXXXXXMLSIWRYXXXXXXXXXXXXTPSTDPXXXXXXXXXXXXXXXXXAWTVK 1105
                         MLSIWRY            TPSTDP                 AW VK
Sbjct: 284  ILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVK 343

Query: 1106 LIGR 1117
            L GR
Sbjct: 344  LSGR 347


>emb|CAN69811.1| hypothetical protein VITISV_043107 [Vitis vinifera]
          Length = 352

 Score =  372 bits (954), Expect = e-100
 Identities = 204/347 (58%), Positives = 241/347 (69%), Gaps = 5/347 (1%)
 Frame = +2

Query: 92   FVNLQLNTNSCFNCVSSTTNHSNYLQINQRKT--YLSVSNKRQNKVNRVVCFALED-VRD 262
            F  L++N    FN +    +H   LQI++R+   +      R    + +VC A+ED  RD
Sbjct: 8    FSLLRINNCCFFNQLHPIRHHKPPLQIHRRRAPGFGPSQRLRLRNFSTLVCSAVEDDARD 67

Query: 263  MQKRLGIGGGGAIVEDKQKVADEIKEDTQVNSDPEK--GALYNFLYPDKELLPEDKEMSI 436
             Q++LG GG G+ VE++  VA++  EDT  N D +K    LY+FLYP KELLP+DKEMSI
Sbjct: 68   KQQQLG-GGVGSXVEERP-VAEDSGEDTLQNVDQDKKENGLYDFLYPSKELLPDDKEMSI 125

Query: 437  FDHLEELRERVFVSVLAVGAAIMGCFVYSKDLIMILEAPVRTQGVRFLQLAPGEFFFTTI 616
            FDHLEELR+R+FVSVLAVGAA++G F +SK+L+MILEAPV+ QGVRFLQLAPGEFFFTT+
Sbjct: 126  FDHLEELRQRIFVSVLAVGAAMLGSFAFSKELVMILEAPVKEQGVRFLQLAPGEFFFTTL 185

Query: 617  KVSGYCGILLGSPVILYEIIAFILPGLTKSERKFLAPIVLGSSILFYAGIAFSYSVLTPA 796
            KVSGYCG+LLGSP+ILYEIIAF+LPGLTK+ER FL PIVLGSS+LFYAGI FSYS+LTPA
Sbjct: 186  KVSGYCGLLLGSPIILYEIIAFVLPGLTKAERMFLGPIVLGSSVLFYAGIIFSYSILTPA 245

Query: 797  ALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFXXXXXXXXXXXXXXXXXXXMLSI 976
            ALNFFV YAEG VESLWSIDQYFEFV VLMFSTGLSF                   MLSI
Sbjct: 246  ALNFFVNYAEGAVESLWSIDQYFEFVFVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSI 305

Query: 977  WRYXXXXXXXXXXXXTPSTDPXXXXXXXXXXXXXXXXXAWTVKLIGR 1117
            WRY            TPSTDP                 AW VKL+GR
Sbjct: 306  WRYVVVGAVVAAAVLTPSTDPLTQVLLAGPLLGLYLGGAWMVKLMGR 352


>ref|XP_003536657.1| PREDICTED: sec-independent protein translocase protein TatC-like
            [Glycine max]
          Length = 346

 Score =  369 bits (948), Expect = e-100
 Identities = 201/323 (62%), Positives = 231/323 (71%), Gaps = 8/323 (2%)
 Frame = +2

Query: 173  NQRKTYLSVSNKRQNKVNRVVCFALED-VRDMQKRLGIG--GGGAIVEDKQKVADEIK-- 337
            N   + LS   KR N     VC A++D +R  Q+ L     G G+ +E++ + AD  +  
Sbjct: 27   NPNPSGLSFPRKRNNSF---VCLAVDDELRQKQQDLSTSATGLGSALEERPENADLFEST 83

Query: 338  -EDTQVN--SDPEKGALYNFLYPDKELLPEDKEMSIFDHLEELRERVFVSVLAVGAAIMG 508
             E+TQ N   D ++GA+Y+FLYPDKELLP+DKEMSIFDHLEELR+R+FVSVLAVGA+I+G
Sbjct: 84   AEETQGNFGQDGDRGAIYDFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGASILG 143

Query: 509  CFVYSKDLIMILEAPVRTQGVRFLQLAPGEFFFTTIKVSGYCGILLGSPVILYEIIAFIL 688
            CF +SK+LIMILEAPV+TQGVRFLQLAPGEFFFTT+KVSGYCG+LLGSPVILYE+IAF+L
Sbjct: 144  CFAFSKELIMILEAPVKTQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEVIAFVL 203

Query: 689  PGLTKSERKFLAPIVLGSSILFYAGIAFSYSVLTPAALNFFVTYAEGVVESLWSIDQYFE 868
            PGLTKSER+FL PIVLGSS+LFYAGI FSY VLTPAALNFFVTYAEG VESLWSIDQYFE
Sbjct: 204  PGLTKSERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVTYAEGAVESLWSIDQYFE 263

Query: 869  FVLVLMFSTGLSFXXXXXXXXXXXXXXXXXXXMLSIWRYXXXXXXXXXXXXTPSTDPXXX 1048
            FVLVLMFSTGLSF                   MLSIWRY            TPSTDP   
Sbjct: 264  FVLVLMFSTGLSFQVPVIQFLLGQLGLVSGDQMLSIWRYVVVGAVVAAAIVTPSTDPLTQ 323

Query: 1049 XXXXXXXXXXXXXXAWTVKLIGR 1117
                          AW VKL GR
Sbjct: 324  ILLAAPLLGLYLGGAWMVKLTGR 346


>ref|XP_004159288.1| PREDICTED: sec-independent protein translocase protein TATC,
            chloroplastic-like [Cucumis sativus]
          Length = 347

 Score =  368 bits (945), Expect = 2e-99
 Identities = 195/304 (64%), Positives = 220/304 (72%), Gaps = 1/304 (0%)
 Frame = +2

Query: 209  RQNKVNRVVCFALED-VRDMQKRLGIGGGGAIVEDKQKVADEIKEDTQVNSDPEKGALYN 385
            R+   NR VC A++D VR+ Q  LG G G  +VED   V D  K  T  N   +K  +YN
Sbjct: 49   RRRNFNRFVCSAVDDDVREKQTELGGGNGSTVVED---VPDIAKNST--NGALDKSDIYN 103

Query: 386  FLYPDKELLPEDKEMSIFDHLEELRERVFVSVLAVGAAIMGCFVYSKDLIMILEAPVRTQ 565
            FLYP K+LLP+D+EMS+FDHLEELR+R+FVSVLAVGAAI+GCF +SKDLI++LEAPV+ Q
Sbjct: 104  FLYPSKDLLPDDREMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQ 163

Query: 566  GVRFLQLAPGEFFFTTIKVSGYCGILLGSPVILYEIIAFILPGLTKSERKFLAPIVLGSS 745
            GVRFLQL PGEFFFTT+KVSGYCG+LLGSPVILYEIIAF+LPGLT++ER+FLAPIVLGSS
Sbjct: 164  GVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSS 223

Query: 746  ILFYAGIAFSYSVLTPAALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFXXXXXX 925
            ILFYAGIAFSY VLTPAALNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSF      
Sbjct: 224  ILFYAGIAFSYVVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ 283

Query: 926  XXXXXXXXXXXXXMLSIWRYXXXXXXXXXXXXTPSTDPXXXXXXXXXXXXXXXXXAWTVK 1105
                         MLSIWRY            TPSTDP                 AW VK
Sbjct: 284  ILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVK 343

Query: 1106 LIGR 1117
            L GR
Sbjct: 344  LSGR 347


Top