BLASTX nr result

ID: Atractylodes22_contig00004061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004061
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270357.1| PREDICTED: uncharacterized protein LOC100263...   123   2e-26
ref|XP_002309074.1| HLIP/One helix protein [Populus trichocarpa]...   114   1e-23
ref|XP_002531553.1| OHP, putative [Ricinus communis] gi|22352881...   113   3e-23
gb|AAP23938.1| one helix protein [Ipomoea nil]                        112   4e-23
ref|NP_001055104.1| Os05g0292800 [Oryza sativa Japonica Group] g...   111   1e-22

>ref|XP_002270357.1| PREDICTED: uncharacterized protein LOC100263187 [Vitis vinifera]
           gi|297740337|emb|CBI30519.3| unnamed protein product
           [Vitis vinifera]
          Length = 121

 Score =  123 bits (309), Expect = 2e-26
 Identities = 68/118 (57%), Positives = 79/118 (66%)
 Frame = -2

Query: 478 LQPLNRQSPPLYLFKASQISKKREFVSFKIQAAKLPAGXXXXXXXXXXXXXXXXXXXXXX 299
           L P N +SP       S IS+ ++ VSF++QAAKLP G                      
Sbjct: 27  LSPFNHRSP------CSTISQPKKKVSFRVQAAKLPPGVELPK----------------- 63

Query: 298 ATPKFQAPFLGFTRTAEIWNSRACMIGLIGTFIVELILNKGILEMIGVEIGKGLDIPL 125
             PKF+APFLGFTRTAEIWNSRACMIGLIG FIVELILNKGIL++IGV+IGKGLD+PL
Sbjct: 64  VEPKFEAPFLGFTRTAEIWNSRACMIGLIGIFIVELILNKGILQVIGVDIGKGLDLPL 121


>ref|XP_002309074.1| HLIP/One helix protein [Populus trichocarpa]
           gi|222855050|gb|EEE92597.1| HLIP/One helix protein
           [Populus trichocarpa]
          Length = 119

 Score =  114 bits (285), Expect = 1e-23
 Identities = 61/102 (59%), Positives = 70/102 (68%)
 Frame = -2

Query: 430 SQISKKREFVSFKIQAAKLPAGXXXXXXXXXXXXXXXXXXXXXXATPKFQAPFLGFTRTA 251
           SQI K  +   F+IQAAKLP G                        PKFQAPFLGFTRTA
Sbjct: 35  SQIIKTSKEPVFRIQAAKLPPGVELPK-----------------VEPKFQAPFLGFTRTA 77

Query: 250 EIWNSRACMIGLIGTFIVELILNKGILEMIGVEIGKGLDIPL 125
           EIWNSRACM+GLIG F+VELI+NKGIL++IGV+IGKGLD+PL
Sbjct: 78  EIWNSRACMMGLIGVFVVELIINKGILQVIGVDIGKGLDLPL 119


>ref|XP_002531553.1| OHP, putative [Ricinus communis] gi|223528814|gb|EEF30819.1| OHP,
           putative [Ricinus communis]
          Length = 115

 Score =  113 bits (282), Expect = 3e-23
 Identities = 69/122 (56%), Positives = 78/122 (63%), Gaps = 4/122 (3%)
 Frame = -2

Query: 478 LQPLNRQSPPLYLFKASQ----ISKKREFVSFKIQAAKLPAGXXXXXXXXXXXXXXXXXX 311
           +QP N+Q   L LFK S     I KK    S  ++AAKLP G                  
Sbjct: 16  IQPQNQQ---LLLFKNSAQIRIIPKKPS--SLTVRAAKLPPGVELPK------------- 57

Query: 310 XXXXATPKFQAPFLGFTRTAEIWNSRACMIGLIGTFIVELILNKGILEMIGVEIGKGLDI 131
                 PKF APFLGFTRTAEIWNSRACMIGLIGTFIVELILNKGIL++IGV++GKGLD+
Sbjct: 58  ----VQPKFVAPFLGFTRTAEIWNSRACMIGLIGTFIVELILNKGILQVIGVDVGKGLDL 113

Query: 130 PL 125
           PL
Sbjct: 114 PL 115


>gb|AAP23938.1| one helix protein [Ipomoea nil]
          Length = 116

 Score =  112 bits (280), Expect = 4e-23
 Identities = 58/92 (63%), Positives = 66/92 (71%)
 Frame = -2

Query: 400 SFKIQAAKLPAGXXXXXXXXXXXXXXXXXXXXXXATPKFQAPFLGFTRTAEIWNSRACMI 221
           SFK+QAAKLPAG                        PK + PFLGFTRTAEIWNSRACMI
Sbjct: 42  SFKLQAAKLPAGVELPKEQ-----------------PKLEPPFLGFTRTAEIWNSRACMI 84

Query: 220 GLIGTFIVELILNKGILEMIGVEIGKGLDIPL 125
           GLIGTFIVELILN+GIL++IGV++GKGLD+PL
Sbjct: 85  GLIGTFIVELILNRGILQLIGVDVGKGLDLPL 116


>ref|NP_001055104.1| Os05g0292800 [Oryza sativa Japonica Group]
           gi|113578655|dbj|BAF17018.1| Os05g0292800 [Oryza sativa
           Japonica Group] gi|125551678|gb|EAY97387.1| hypothetical
           protein OsI_19311 [Oryza sativa Indica Group]
           gi|215765338|dbj|BAG87035.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222630981|gb|EEE63113.1| hypothetical protein
           OsJ_17921 [Oryza sativa Japonica Group]
          Length = 112

 Score =  111 bits (277), Expect = 1e-22
 Identities = 59/92 (64%), Positives = 64/92 (69%)
 Frame = -2

Query: 400 SFKIQAAKLPAGXXXXXXXXXXXXXXXXXXXXXXATPKFQAPFLGFTRTAEIWNSRACMI 221
           S KI+AAKLPAG                        PK   PFLGFTRTAEIWNSRACMI
Sbjct: 38  SVKIRAAKLPAGVEVPRKQ-----------------PKLSEPFLGFTRTAEIWNSRACMI 80

Query: 220 GLIGTFIVELILNKGILEMIGVEIGKGLDIPL 125
           GLIGTFIVEL+LNKGIL+MIGVE+GKGLD+PL
Sbjct: 81  GLIGTFIVELVLNKGILQMIGVEVGKGLDLPL 112


Top