BLASTX nr result

ID: Atractylodes22_contig00003977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003977
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_395470.1| putative translational transactivator [Blueberr...    62   6e-08
gb|ADX60611.2| transcriptional activator [Blueberry red ringspot...    62   6e-08
gb|ADX60605.2| transcriptional activator [Blueberry red ringspot...    62   6e-08
gb|ADX60607.2| transcriptional activator [Blueberry red ringspot...    61   8e-08
gb|AEH95574.1| translational transactivator [Blueberry red rings...    60   2e-07

>ref|NP_395470.1| putative translational transactivator [Blueberry red ringspot
           virus] gi|16033537|gb|AAL13275.1|AF404509_5 putative
           translational transactivator [Blueberry red ringspot
           virus]
          Length = 428

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/73 (39%), Positives = 45/73 (61%)
 Frame = -3

Query: 253 EFPTKV*QVIKNYKERFAKERELYIKMYSSYPFFDEQNQVLVPSITLGQLGVSNEQYPTK 74
           +FP ++ Q I NY +RFAKER  YIK++S++P F  Q +  +PS ++ Q+G+SN   P  
Sbjct: 241 DFPERIKQTINNYFKRFAKERPCYIKLFSTHPTFSIQGEEDMPSYSVLQIGISNGDMPLM 300

Query: 73  DEIPEKTPQINHL 35
           D +    P+   L
Sbjct: 301 DTLHMPVPKHEEL 313


>gb|ADX60611.2| transcriptional activator [Blueberry red ringspot virus]
          Length = 427

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/73 (39%), Positives = 45/73 (61%)
 Frame = -3

Query: 253 EFPTKV*QVIKNYKERFAKERELYIKMYSSYPFFDEQNQVLVPSITLGQLGVSNEQYPTK 74
           +FP ++ Q I NY +RFAKER  YIK++S++P F  Q +  +PS ++ Q+G+SN   P  
Sbjct: 241 DFPERIKQTINNYFKRFAKERPCYIKLFSTHPTFSIQGEEDMPSYSVLQIGISNGDMPLM 300

Query: 73  DEIPEKTPQINHL 35
           D +    P+   L
Sbjct: 301 DTLHMPVPKHEEL 313


>gb|ADX60605.2| transcriptional activator [Blueberry red ringspot virus]
          Length = 427

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/73 (39%), Positives = 45/73 (61%)
 Frame = -3

Query: 253 EFPTKV*QVIKNYKERFAKERELYIKMYSSYPFFDEQNQVLVPSITLGQLGVSNEQYPTK 74
           +FP ++ Q I NY +RFAKER  YIK++S++P F  Q +  +PS ++ Q+G+SN   P  
Sbjct: 241 DFPERIKQTINNYFKRFAKERPCYIKLFSTHPTFSIQGEEDMPSYSVLQIGISNGDMPLM 300

Query: 73  DEIPEKTPQINHL 35
           D +    P+   L
Sbjct: 301 DTLHMPVPKHEEL 313


>gb|ADX60607.2| transcriptional activator [Blueberry red ringspot virus]
          Length = 427

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/73 (39%), Positives = 44/73 (60%)
 Frame = -3

Query: 253 EFPTKV*QVIKNYKERFAKERELYIKMYSSYPFFDEQNQVLVPSITLGQLGVSNEQYPTK 74
           +FP ++ Q I NY +RFAKER  YIK++S++P F  Q +  +PS  + Q+G+SN   P  
Sbjct: 241 DFPERIKQTINNYFKRFAKERPCYIKLFSTHPTFSIQGEEDMPSYAVLQIGISNGDMPLM 300

Query: 73  DEIPEKTPQINHL 35
           D +    P+   L
Sbjct: 301 DTLHMPVPKHEEL 313


>gb|AEH95574.1| translational transactivator [Blueberry red ringspot virus]
          Length = 427

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
 Frame = -3

Query: 253 EFPTKV*QVIKNYKERFAKERELYIKMYSSYPFFDEQNQVLVPSITLGQLGVSNEQYPTK 74
           +FP ++ Q I NY +RFAKER  YIK++S++P F  Q +  +PS ++ Q+G+SN   P  
Sbjct: 241 DFPERIKQTINNYFKRFAKERPCYIKLFSTHPTFSIQGEEDMPSYSVLQIGISNGDMPLM 300

Query: 73  D----EIP--EKTPQIN 41
           D     IP  E+  QIN
Sbjct: 301 DTHHMPIPKHEELKQIN 317


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