BLASTX nr result

ID: Atractylodes22_contig00003969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003969
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551375.1| PREDICTED: RNA-binding protein pno1-like [Gl...   368   2e-99
gb|ACU24003.1| unknown [Glycine max]                                  366   5e-99
ref|XP_003551374.1| PREDICTED: RNA-binding protein pno1-like [Gl...   365   8e-99
gb|AFK42398.1| unknown [Lotus japonicus]                              362   7e-98
ref|XP_004148267.1| PREDICTED: RNA-binding protein pno1-like [Cu...   362   9e-98

>ref|XP_003551375.1| PREDICTED: RNA-binding protein pno1-like [Glycine max]
          Length = 220

 Score =  368 bits (944), Expect = 2e-99
 Identities = 182/219 (83%), Positives = 205/219 (93%), Gaps = 1/219 (0%)
 Frame = +2

Query: 278 MQSNKGATSMEVEEAVPSETKVVS-KPNFKPLTAHEISDGQVQFRKISVPKHRYTPLKKA 454
           M+SN+ A+SMEVE  VPSE K++  KP F+PL  HE+SDGQVQFRK++VP HRYTPLKKA
Sbjct: 1   MESNQAASSMEVE-TVPSEAKLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKA 59

Query: 455 WMDIYTPIYDQMKVDIRMNVKTRNVELMTRRDTPDVSNLQKCADFVHAFMLGFDVIDAVA 634
           WMDIYTPIY+QMK+D+RMN+K R VEL TR DTPD+SNLQKCADFVHAFMLGFDVIDA+A
Sbjct: 60  WMDIYTPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAIA 119

Query: 635 LLRMDELYVDSFEIKDVKTLKGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTKIHI 814
           LLR+DELY++SFEIKDVKTL+G+HLSRAIGRLSGKGGKTKFAIEN++KTRIVIADTKIHI
Sbjct: 120 LLRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHI 179

Query: 815 LGSFANIKVARDSLCSLILGSPAGKVYSKLRAVTARLAE 931
           LGSFANIK+ARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 180 LGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 218


>gb|ACU24003.1| unknown [Glycine max]
          Length = 220

 Score =  366 bits (940), Expect = 5e-99
 Identities = 182/219 (83%), Positives = 204/219 (93%), Gaps = 1/219 (0%)
 Frame = +2

Query: 278 MQSNKGATSMEVEEAVPSETKVVS-KPNFKPLTAHEISDGQVQFRKISVPKHRYTPLKKA 454
           M SN+ A+SMEVE  VPSE K++  KP F+PL  HE+SDGQVQFRK++VP HRYTPLKKA
Sbjct: 1   MGSNQAASSMEVE-TVPSEAKLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKA 59

Query: 455 WMDIYTPIYDQMKVDIRMNVKTRNVELMTRRDTPDVSNLQKCADFVHAFMLGFDVIDAVA 634
           WMDIYTPIY+QMK+D+RMN+K R VEL TR DTPD+SNLQKCADFVHAFMLGFDVIDA+A
Sbjct: 60  WMDIYTPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAIA 119

Query: 635 LLRMDELYVDSFEIKDVKTLKGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTKIHI 814
           LLR+DELY++SFEIKDVKTL+G+HLSRAIGRLSGKGGKTKFAIEN++KTRIVIADTKIHI
Sbjct: 120 LLRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHI 179

Query: 815 LGSFANIKVARDSLCSLILGSPAGKVYSKLRAVTARLAE 931
           LGSFANIK+ARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 180 LGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 218


>ref|XP_003551374.1| PREDICTED: RNA-binding protein pno1-like [Glycine max]
          Length = 220

 Score =  365 bits (938), Expect = 8e-99
 Identities = 181/219 (82%), Positives = 205/219 (93%), Gaps = 1/219 (0%)
 Frame = +2

Query: 278 MQSNKGATSMEVEEAVPSETKVVS-KPNFKPLTAHEISDGQVQFRKISVPKHRYTPLKKA 454
           M+SN+ A+SMEVE  VPSE K++  KP F+PL  HE+SDGQVQFRK++VP HRYTPLKKA
Sbjct: 1   MESNQEASSMEVE-TVPSEAKLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKA 59

Query: 455 WMDIYTPIYDQMKVDIRMNVKTRNVELMTRRDTPDVSNLQKCADFVHAFMLGFDVIDAVA 634
           WMDIY+PIY+QMK+D+RMN+K R VEL TR DTPD+SNLQKCADFVHAFMLGFDVIDA+A
Sbjct: 60  WMDIYSPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAIA 119

Query: 635 LLRMDELYVDSFEIKDVKTLKGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTKIHI 814
           LLR+DELY++SFEIKDVKTL+G+HLSRAIGRLSGKGGKTKFAIEN++KTRIVIADTKIHI
Sbjct: 120 LLRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHI 179

Query: 815 LGSFANIKVARDSLCSLILGSPAGKVYSKLRAVTARLAE 931
           LGSFANIK+ARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 180 LGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 218


>gb|AFK42398.1| unknown [Lotus japonicus]
          Length = 220

 Score =  362 bits (930), Expect = 7e-98
 Identities = 179/219 (81%), Positives = 205/219 (93%), Gaps = 1/219 (0%)
 Frame = +2

Query: 278 MQSNKGATSMEVEEAVPSETKVVS-KPNFKPLTAHEISDGQVQFRKISVPKHRYTPLKKA 454
           MQSN+  ++MEVE A PSE KV+  KP F+PL  HE+SDGQVQFRK+SVP HRYTPLKKA
Sbjct: 1   MQSNEAPSTMEVE-ASPSEPKVLPPKPLFEPLKPHEMSDGQVQFRKVSVPPHRYTPLKKA 59

Query: 455 WMDIYTPIYDQMKVDIRMNVKTRNVELMTRRDTPDVSNLQKCADFVHAFMLGFDVIDAVA 634
           WMD++TPIY+QMK+D+RMN+K R VEL TRRDTPD+SNLQKCADFVHAFMLGFDVIDA+A
Sbjct: 60  WMDLHTPIYEQMKIDVRMNLKARKVELKTRRDTPDISNLQKCADFVHAFMLGFDVIDAIA 119

Query: 635 LLRMDELYVDSFEIKDVKTLKGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTKIHI 814
           LLR+DELY++SFEIKDVKTL+G+HLSRAIGRLSGKGGKTKFAIEN++KTRIVIAD+KIHI
Sbjct: 120 LLRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADSKIHI 179

Query: 815 LGSFANIKVARDSLCSLILGSPAGKVYSKLRAVTARLAE 931
           LGSFANIK+ARDSLCSLI+GSPAGKVYSKLRAVT+RLAE
Sbjct: 180 LGSFANIKIARDSLCSLIMGSPAGKVYSKLRAVTSRLAE 218


>ref|XP_004148267.1| PREDICTED: RNA-binding protein pno1-like [Cucumis sativus]
          Length = 224

 Score =  362 bits (929), Expect = 9e-98
 Identities = 182/222 (81%), Positives = 199/222 (89%), Gaps = 4/222 (1%)
 Frame = +2

Query: 278 MQSNKGATSMEVEEAVPSETKVVS----KPNFKPLTAHEISDGQVQFRKISVPKHRYTPL 445
           MQSN+ +TSM+VE        VVS    KP F PL  HE++DG+VQFRK+SVP HRY+PL
Sbjct: 1   MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 446 KKAWMDIYTPIYDQMKVDIRMNVKTRNVELMTRRDTPDVSNLQKCADFVHAFMLGFDVID 625
           KKAWMDIYTPIYDQMK+DIRMN+K R VEL TR DTPD+SNLQKCADFVHAFMLGFDVID
Sbjct: 61  KKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 120

Query: 626 AVALLRMDELYVDSFEIKDVKTLKGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTK 805
           A+ALLR+DELYV+SFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 806 IHILGSFANIKVARDSLCSLILGSPAGKVYSKLRAVTARLAE 931
           IHILGSFANIK+ARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 222


Top