BLASTX nr result

ID: Atractylodes22_contig00003929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003929
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282194.2| PREDICTED: uncharacterized protein LOC100245...    73   2e-11
emb|CBI16818.3| unnamed protein product [Vitis vinifera]               73   2e-11
emb|CAN81849.1| hypothetical protein VITISV_036820 [Vitis vinifera]    65   6e-09
ref|XP_003601886.1| Nucleoporin GLE1 [Medicago truncatula] gi|35...    56   3e-06

>ref|XP_002282194.2| PREDICTED: uncharacterized protein LOC100245667 [Vitis vinifera]
          Length = 680

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
 Frame = +1

Query: 4   KLQASSLVPLAFAKPHSSSDLSVVSHAEKNRKSFVMHVSDDD----------EGNNSRSL 153
           KL +SS+ P+ F K  S      +S+ +K   +FVM VSDD+          EG   RSL
Sbjct: 63  KLNSSSIFPIPFTKTESRG----LSNVKKGPTAFVMRVSDDEMEDVEREGGVEGVYDRSL 118

Query: 154 AMGSRFVCEEVYLSDGADSDNESTTGAEWYLMDKGGVIEGA 276
             GSRF C+E+YLS   DSD+ES    +++LMDK GV EGA
Sbjct: 119 VAGSRFACDELYLS---DSDDESNLHDQFHLMDKAGVAEGA 156


>emb|CBI16818.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
 Frame = +1

Query: 4   KLQASSLVPLAFAKPHSSSDLSVVSHAEKNRKSFVMHVSDDD----------EGNNSRSL 153
           KL +SS+ P+ F K  S      +S+ +K   +FVM VSDD+          EG   RSL
Sbjct: 80  KLNSSSIFPIPFTKTESRG----LSNVKKGPTAFVMRVSDDEMEDVEREGGVEGVYDRSL 135

Query: 154 AMGSRFVCEEVYLSDGADSDNESTTGAEWYLMDKGGVIEGA 276
             GSRF C+E+YLS   DSD+ES    +++LMDK GV EGA
Sbjct: 136 VAGSRFACDELYLS---DSDDESNLHDQFHLMDKAGVAEGA 173


>emb|CAN81849.1| hypothetical protein VITISV_036820 [Vitis vinifera]
          Length = 745

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 14/104 (13%)
 Frame = +1

Query: 4   KLQASSLVPLAFAKPHSSSDLSVVSHAEKNRKSFVMHVSDDD----------EGNNSRSL 153
           KL +SS+ P+ F K  S      +S+ +K   +FVM VSDD+          E    RSL
Sbjct: 110 KLNSSSIFPIPFTKTESRG----LSNVKKGPTAFVMRVSDDEMEDVEREGGVEEVYDRSL 165

Query: 154 AMGSRFVCEEVYLS----DGADSDNESTTGAEWYLMDKGGVIEG 273
             GSRF C+E+YL       +DSD+ES    +++LMDK GV EG
Sbjct: 166 VAGSRFACDELYLRFCKWPFSDSDDESNLHDQFHLMDKAGVAEG 209


>ref|XP_003601886.1| Nucleoporin GLE1 [Medicago truncatula] gi|355490934|gb|AES72137.1|
           Nucleoporin GLE1 [Medicago truncatula]
          Length = 599

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
 Frame = +1

Query: 16  SSLVPLAFAKPHSSS-DLSVVSHAEKNRKSFVMHVSD---DDEGNNSRSLAM---GSRFV 174
           SS  PL F +  SS  +LS     EK R+ FV    +   D E ++ ++L +   G  F 
Sbjct: 41  SSTPPLHFHQTTSSRVNLSGRKEIEKGRR-FVFRAPEYETDSEDDDDKALVVSDTGKHFT 99

Query: 175 CEEVYLSDGADSDNESTTGAEWYLMDKGGVIEGAL 279
           C+E+YLSD  DSD ES    + YLM+K G +EGAL
Sbjct: 100 CDEIYLSDSDDSDVESALEVQPYLMNKVGEVEGAL 134


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