BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003920
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus...   211   4e-53
ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloro...   210   1e-52
ref|NP_568299.1| 30S ribosomal protein S13 [Arabidopsis thaliana...   207   6e-52
ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|2...   207   8e-52
gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea bras...   206   1e-51

>ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis]
           gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 290

 Score =  211 bits (538), Expect = 4e-53
 Identities = 101/112 (90%), Positives = 109/112 (97%)
 Frame = -3

Query: 526 LSIRCARVGGVEIPNNKRVQYSLQYIHGIGRTRALEILNDLKMENKITKDLSEEELITLR 347
           LSIRCARVGGVEIPNNKR++YSLQYIHG+GR+RA +IL+DL MENKITK+LSEEELITLR
Sbjct: 164 LSIRCARVGGVEIPNNKRIEYSLQYIHGVGRSRARQILSDLSMENKITKELSEEELITLR 223

Query: 346 DEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 191
           DEVSKYMIEGDLRRFNAL IRRLKEIQCYRG+RHIQGLPCRGQRTKNNCRTL
Sbjct: 224 DEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTL 275



 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/109 (55%), Positives = 80/109 (73%)
 Frame = -3

Query: 520 IRCARVGGVEIPNNKRVQYSLQYIHGIGRTRALEILNDLKMENKITKDLSEEELITLRDE 341
           ++C RVG  EIP++K+++++LQ+I GIGR RA +IL DL +ENK TKDL+  EL TLR+E
Sbjct: 33  VQCLRVGNAEIPDDKQLRFALQHIRGIGRQRAHQILIDLSLENKRTKDLTGLELHTLRNE 92

Query: 340 VSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRT 194
           VSKY+I  +L R     I+RL +IQCYRG  H   LPCRGQ T+ N RT
Sbjct: 93  VSKYLIGEELTRCVRSDIQRLADIQCYRGYNHACLLPCRGQLTRTNART 141


>ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Vitis
           vinifera] gi|302141873|emb|CBI19076.3| unnamed protein
           product [Vitis vinifera]
          Length = 167

 Score =  210 bits (534), Expect = 1e-52
 Identities = 103/112 (91%), Positives = 109/112 (97%)
 Frame = -3

Query: 526 LSIRCARVGGVEIPNNKRVQYSLQYIHGIGRTRALEILNDLKMENKITKDLSEEELITLR 347
           LSI+CARVGGVEIPN+KRV+YSLQYIHGIGR+R+ +IL DL MENKITKDLSEEELITLR
Sbjct: 42  LSIKCARVGGVEIPNSKRVEYSLQYIHGIGRSRSKQILCDLGMENKITKDLSEEELITLR 101

Query: 346 DEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 191
           DEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL
Sbjct: 102 DEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 153


>ref|NP_568299.1| 30S ribosomal protein S13 [Arabidopsis thaliana]
           gi|1173194|sp|P42732.1|RR13_ARATH RecName: Full=30S
           ribosomal protein S13, chloroplastic; AltName:
           Full=CS13; Flags: Precursor gi|16767|emb|CAA79013.1|
           chloroplast 30S ribosomal protein S13 [Arabidopsis
           thaliana] gi|662869|emb|CAA88028.1| chloroplast
           ribosomal protein S13 [Arabidopsis thaliana]
           gi|1107483|emb|CAA63021.1| 30S ribosomal protein S13
           [Arabidopsis thaliana] gi|1515107|emb|CAA60413.1|
           plastid ribosomal protein S13 [Arabidopsis thaliana]
           gi|14517397|gb|AAK62589.1| AT5g14320/F18O22_110
           [Arabidopsis thaliana] gi|15450549|gb|AAK96452.1|
           AT5g14320/F18O22_110 [Arabidopsis thaliana]
           gi|332004633|gb|AED92016.1| 30S ribosomal protein S13
           [Arabidopsis thaliana]
          Length = 169

 Score =  207 bits (528), Expect = 6e-52
 Identities = 100/112 (89%), Positives = 108/112 (96%)
 Frame = -3

Query: 526 LSIRCARVGGVEIPNNKRVQYSLQYIHGIGRTRALEILNDLKMENKITKDLSEEELITLR 347
           LSIRCARVGGVEIP NKR++YSLQYIHGIGRTRA +IL DL+MENKITKD++EEELI LR
Sbjct: 43  LSIRCARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILR 102

Query: 346 DEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 191
           DEVSKYMIEGDLRRFNALAI+RLKEIQCYRG+RHIQGLPCRGQRTKNNCRTL
Sbjct: 103 DEVSKYMIEGDLRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTL 154


>ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|222856058|gb|EEE93605.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  207 bits (527), Expect = 8e-52
 Identities = 101/112 (90%), Positives = 108/112 (96%)
 Frame = -3

Query: 526 LSIRCARVGGVEIPNNKRVQYSLQYIHGIGRTRALEILNDLKMENKITKDLSEEELITLR 347
           LSIRCARVGGVEIPN+KRV+YSLQYIHGIGR+ A +IL+DL MENKITKDLSE+ELITLR
Sbjct: 42  LSIRCARVGGVEIPNSKRVEYSLQYIHGIGRSIARQILSDLTMENKITKDLSEDELITLR 101

Query: 346 DEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 191
           DEVSKYMIEGDLRRFNAL IRRLKEIQCYRG+RHIQGLPCRGQRTKNNCRTL
Sbjct: 102 DEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTL 153


>gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
          Length = 168

 Score =  206 bits (525), Expect = 1e-51
 Identities = 100/112 (89%), Positives = 108/112 (96%)
 Frame = -3

Query: 526 LSIRCARVGGVEIPNNKRVQYSLQYIHGIGRTRALEILNDLKMENKITKDLSEEELITLR 347
           LSI+CARVGGVEIPNNKRV+YSLQYIHG+GR+RA +IL+DL M+NKITKDLSEEELITLR
Sbjct: 42  LSIQCARVGGVEIPNNKRVEYSLQYIHGVGRSRARQILSDLSMQNKITKDLSEEELITLR 101

Query: 346 DEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 191
           DEVSKYMIEGDLRRFNAL IR LKEIQC+RGIRHIQGLPCRGQRTKNNCRTL
Sbjct: 102 DEVSKYMIEGDLRRFNALNIRGLKEIQCHRGIRHIQGLPCRGQRTKNNCRTL 153