BLASTX nr result
ID: Atractylodes22_contig00003896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00003896
(2190 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein lig... 644 0.0
emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera] 633 0.0
ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinu... 617 0.0
ref|XP_002316910.1| predicted protein [Populus trichocarpa] gi|2... 615 0.0
ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein lig... 604 0.0
>ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
vinifera] gi|302143037|emb|CBI20332.3| unnamed protein
product [Vitis vinifera]
Length = 492
Score = 644 bits (1661), Expect(2) = 0.0
Identities = 306/374 (81%), Positives = 338/374 (90%)
Frame = -2
Query: 1283 MQIRSGRYHTLLIKDSTVYSCGSSLCGVLGHGPETTQCVAFTPIKFPYPAHVTHVSASHN 1104
MQI +GRYHTLLIKDS+VYSCGSSLCGVLGHGPETTQCVAF+ I FP AHV VSASHN
Sbjct: 114 MQITTGRYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHN 173
Query: 1103 HAAFVTQSGKVFTCGDNSSFCCGHSDTSRPIFKPRLVEALKEVPCKQVAAGVSFTVFLTR 924
HAAFV QSG+VFTCGDNSSFCCGH DT RPIF+PRLVEALK VPCKQVAAG+SFTVFLT
Sbjct: 174 HAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTM 233
Query: 923 EGQVYTCGTSAHGQLGHGDTLDRPTPKLVEALVSVGPVVQIAAGPSYALAVTNDGTVYSF 744
+G VYTCGT+ HGQLGHGDT+DR TPK+VE L VGPVVQIAAGPSYA+AVT+DGTV+SF
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSF 293
Query: 743 GSGTNFCLGHGEQHNELRPRPLQSFRRKGIHVVRVSAGDEHVVALDSNGYVYTWGKGYCG 564
GSG+NFCLGHGEQHNELRPR +QSFRRK IHVVR+SAGDEHVVALDS+G+VYTWGKGYCG
Sbjct: 294 GSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCG 353
Query: 563 ALGHGDEIDKTTPELLSSLKNHLAVQVCASKRKTFVLVDNGCLYGFGWMGFGSLGFPDRG 384
ALGHGDEIDKTTPE+LSSLK+HLAVQVCA KRKTFVLVD G +YGFGWMGFGSLGFPDRG
Sbjct: 354 ALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
Query: 383 VSDKVLKPSMLYSLKDHHISQVSTGLYHSVVVTNRGRIFGFGDNERAQLGHDELRDCLNP 204
SDKV++P +L SL+ H+ISQ+STGLYH+V V N+G+IFGFGDNERAQLGHD LR C P
Sbjct: 414 ASDKVMRPWILDSLRGHYISQISTGLYHTVAVNNKGQIFGFGDNERAQLGHDTLRGCPVP 473
Query: 203 TEILVEEASDLANR 162
TEI V+EA+D A R
Sbjct: 474 TEIFVQEATDDAGR 487
Score = 152 bits (384), Expect(2) = 0.0
Identities = 78/112 (69%), Positives = 90/112 (80%)
Frame = -1
Query: 1674 MGDRLRSATLEDLPLHLILEILTSGGRLSGVDLVCLELTNKTFRGTHGLVPNKLKSLVDF 1495
M +R S + E+LP HLILEIL+SG RLS VDLVCLELT++TF +HGL P+K +SLVDF
Sbjct: 1 MANRYWSVSFEELPSHLILEILSSG-RLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDF 59
Query: 1494 AAFQLCGSHPIYTCLSYRAQEELLARCGGNWKRVLRFLQSVHQSSDMVETSA 1339
AAFQLCGSHPIY LS AQ++L RCG NWKRVLRFLQSV QSS + ETSA
Sbjct: 60 AAFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSA 111
>emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
Length = 511
Score = 633 bits (1633), Expect(2) = 0.0
Identities = 300/363 (82%), Positives = 330/363 (90%)
Frame = -2
Query: 1283 MQIRSGRYHTLLIKDSTVYSCGSSLCGVLGHGPETTQCVAFTPIKFPYPAHVTHVSASHN 1104
MQI +GRYHTLLIKDS+VYSCGSSLCGVLGHGPETTQCVAF+ I FP AHV VSASHN
Sbjct: 114 MQITTGRYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHN 173
Query: 1103 HAAFVTQSGKVFTCGDNSSFCCGHSDTSRPIFKPRLVEALKEVPCKQVAAGVSFTVFLTR 924
HAAFV QSG+VFTCGDNSSFCCGH DT RPIF+PRLVEALK VPCKQVAAG+SFTVFLT
Sbjct: 174 HAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTM 233
Query: 923 EGQVYTCGTSAHGQLGHGDTLDRPTPKLVEALVSVGPVVQIAAGPSYALAVTNDGTVYSF 744
+G VYTCGT+ HGQLGHGDT+DR TPK+VE L VGPVVQIAAGPSYA+AVT+DGTV+SF
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSF 293
Query: 743 GSGTNFCLGHGEQHNELRPRPLQSFRRKGIHVVRVSAGDEHVVALDSNGYVYTWGKGYCG 564
GSG+NFCLGHGEQHNELRPR +QSFRRK IHVVR+SAGDEHVVALDS+G+VYTWGKGYCG
Sbjct: 294 GSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCG 353
Query: 563 ALGHGDEIDKTTPELLSSLKNHLAVQVCASKRKTFVLVDNGCLYGFGWMGFGSLGFPDRG 384
ALGHGDEIDKTTPE+LSSLK+HLAVQVCA KRKTFVLVD G +YGFGWMGFGSLGFPDRG
Sbjct: 354 ALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
Query: 383 VSDKVLKPSMLYSLKDHHISQVSTGLYHSVVVTNRGRIFGFGDNERAQLGHDELRDCLNP 204
SDKV++P +L SL+ H+ISQ+STGLYH+V V N+G+IFGFGDNERAQLGHD LR C P
Sbjct: 414 ASDKVMRPWILDSLRGHYISQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVP 473
Query: 203 TEI 195
TEI
Sbjct: 474 TEI 476
Score = 152 bits (384), Expect(2) = 0.0
Identities = 78/112 (69%), Positives = 90/112 (80%)
Frame = -1
Query: 1674 MGDRLRSATLEDLPLHLILEILTSGGRLSGVDLVCLELTNKTFRGTHGLVPNKLKSLVDF 1495
M +R S + E+LP HLILEIL+SG RLS VDLVCLELT++TF +HGL P+K +SLVDF
Sbjct: 1 MANRYWSVSFEELPSHLILEILSSG-RLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDF 59
Query: 1494 AAFQLCGSHPIYTCLSYRAQEELLARCGGNWKRVLRFLQSVHQSSDMVETSA 1339
AAFQLCGSHPIY LS AQ++L RCG NWKRVLRFLQSV QSS + ETSA
Sbjct: 60 AAFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSA 111
>ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223532017|gb|EEF33828.1| Ran GTPase binding protein,
putative [Ricinus communis]
Length = 497
Score = 617 bits (1592), Expect(2) = 0.0
Identities = 284/367 (77%), Positives = 326/367 (88%)
Frame = -2
Query: 1283 MQIRSGRYHTLLIKDSTVYSCGSSLCGVLGHGPETTQCVAFTPIKFPYPAHVTHVSASHN 1104
MQI +GRYHTLLI +S+VYSCGSSLCGVLGHGPETTQCV+F+ I FP A V VSASHN
Sbjct: 114 MQITTGRYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHN 173
Query: 1103 HAAFVTQSGKVFTCGDNSSFCCGHSDTSRPIFKPRLVEALKEVPCKQVAAGVSFTVFLTR 924
HAA++ +SG+VFTCGDNSSFCCGH DTSRPIF+PR VEALK VPCKQVAAG++FTVFLTR
Sbjct: 174 HAAYILESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTR 233
Query: 923 EGQVYTCGTSAHGQLGHGDTLDRPTPKLVEALVSVGPVVQIAAGPSYALAVTNDGTVYSF 744
G VY+CGT+ HGQLGHGDTLDRPTPK++E+ +G V QIAAGPSY LAVT+ G VYSF
Sbjct: 234 TGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTDSGVVYSF 293
Query: 743 GSGTNFCLGHGEQHNELRPRPLQSFRRKGIHVVRVSAGDEHVVALDSNGYVYTWGKGYCG 564
GSG+NFCLGHGEQHNE PR +Q+FRRK +HVVRVSAGDEHVVALDS+G+VYTWGKGYCG
Sbjct: 294 GSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYCG 353
Query: 563 ALGHGDEIDKTTPELLSSLKNHLAVQVCASKRKTFVLVDNGCLYGFGWMGFGSLGFPDRG 384
ALGHGDEIDKT PE L+SLK+HLAVQVCA KRKTFVLVD GC++GFGWMGFGSLGFPDRG
Sbjct: 354 ALGHGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRG 413
Query: 383 VSDKVLKPSMLYSLKDHHISQVSTGLYHSVVVTNRGRIFGFGDNERAQLGHDELRDCLNP 204
VSDKV++P +L SL+ H +SQ+STGLYH+V VT++G++FGFGDNERAQLGHD LR CL P
Sbjct: 414 VSDKVMRPRILDSLRAHRVSQISTGLYHTVAVTSQGQVFGFGDNERAQLGHDTLRGCLEP 473
Query: 203 TEILVEE 183
TEI ++E
Sbjct: 474 TEIFLQE 480
Score = 153 bits (386), Expect(2) = 0.0
Identities = 76/112 (67%), Positives = 91/112 (81%)
Frame = -1
Query: 1674 MGDRLRSATLEDLPLHLILEILTSGGRLSGVDLVCLELTNKTFRGTHGLVPNKLKSLVDF 1495
M D+ R ++++LP HLILEIL +G RLS DLVCLELT+KTF G+HGL P+K KSLVDF
Sbjct: 1 MADKYRLVSIDELPSHLILEILMTG-RLSATDLVCLELTSKTFGGSHGLYPHKFKSLVDF 59
Query: 1494 AAFQLCGSHPIYTCLSYRAQEELLARCGGNWKRVLRFLQSVHQSSDMVETSA 1339
AAFQLC SH +YT + + AQ+ELL RCGGNWKRVLRFL +V +SS MVETSA
Sbjct: 60 AAFQLCASHSVYTGMLWNAQKELLDRCGGNWKRVLRFLLAVEESSGMVETSA 111
>ref|XP_002316910.1| predicted protein [Populus trichocarpa] gi|222859975|gb|EEE97522.1|
predicted protein [Populus trichocarpa]
Length = 478
Score = 615 bits (1586), Expect(2) = 0.0
Identities = 286/365 (78%), Positives = 327/365 (89%)
Frame = -2
Query: 1283 MQIRSGRYHTLLIKDSTVYSCGSSLCGVLGHGPETTQCVAFTPIKFPYPAHVTHVSASHN 1104
MQ+ +GRYHTLLI+DS+VYSCGSSLCGVLGHG ETTQCVAFT I+FP A+V VSASHN
Sbjct: 114 MQVTTGRYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHN 173
Query: 1103 HAAFVTQSGKVFTCGDNSSFCCGHSDTSRPIFKPRLVEALKEVPCKQVAAGVSFTVFLTR 924
HAAFV QSG+VFTCGDNSSFCCGH+DT+RPIF+PRLVEALK VPCKQVA G++FTVFLTR
Sbjct: 174 HAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTR 233
Query: 923 EGQVYTCGTSAHGQLGHGDTLDRPTPKLVEALVSVGPVVQIAAGPSYALAVTNDGTVYSF 744
+GQ+YTCGT+ HGQLGHGDT DRPTPK++E L VG VVQIAAGPSY LAVT++G VYSF
Sbjct: 234 QGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSF 293
Query: 743 GSGTNFCLGHGEQHNELRPRPLQSFRRKGIHVVRVSAGDEHVVALDSNGYVYTWGKGYCG 564
GSG+N CLGHGEQH+E RPR +Q+FRRK IHVV VSAGDEH VALDS+G+VY+WGKGYCG
Sbjct: 294 GSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCG 353
Query: 563 ALGHGDEIDKTTPELLSSLKNHLAVQVCASKRKTFVLVDNGCLYGFGWMGFGSLGFPDRG 384
ALGHGDEIDKT P L++ LK+HLAVQVCA KRKTFVLVD G +YGFGWMGFGSLGFPDRG
Sbjct: 354 ALGHGDEIDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRG 413
Query: 383 VSDKVLKPSMLYSLKDHHISQVSTGLYHSVVVTNRGRIFGFGDNERAQLGHDELRDCLNP 204
+SDKV++P +L SL+ H+SQ+STGLYH+VVVTN+G++FGFGDNERAQLGHD LR CL P
Sbjct: 414 LSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQP 473
Query: 203 TEILV 189
TEI V
Sbjct: 474 TEIFV 478
Score = 146 bits (369), Expect(2) = 0.0
Identities = 72/112 (64%), Positives = 89/112 (79%)
Frame = -1
Query: 1674 MGDRLRSATLEDLPLHLILEILTSGGRLSGVDLVCLELTNKTFRGTHGLVPNKLKSLVDF 1495
M D+ RS ++EDLP HLI EILT+G RLS VDL CLELT++TF G+HGL P K +SLVDF
Sbjct: 1 MADKNRSVSIEDLPSHLIFEILTTG-RLSAVDLACLELTSRTFGGSHGLYPQKFRSLVDF 59
Query: 1494 AAFQLCGSHPIYTCLSYRAQEELLARCGGNWKRVLRFLQSVHQSSDMVETSA 1339
AA+QLC SH +Y+ + + AQ+ L RC GNWKRVLRFLQ+V +SS MV+TSA
Sbjct: 60 AAYQLCVSHRVYSGMGWNAQKGLFGRCEGNWKRVLRFLQAVEESSGMVKTSA 111
Score = 67.0 bits (162), Expect = 2e-08
Identities = 60/215 (27%), Positives = 88/215 (40%), Gaps = 2/215 (0%)
Frame = -2
Query: 809 VQIAAGPSYALAVTNDGTVYSFGSGTNFCLGHGEQHNELRPRPLQSFRRKGIHVVRVSAG 630
+Q+ G + L + D +VYS GS LGHG + + F +V++VSA
Sbjct: 114 MQVTTGRYHTLLI-RDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLA-YVIQVSAS 171
Query: 629 DEHVVALDSNGYVYTWGKGYCGALGHGDEIDKT-TPELLSSLKNHLAVQVCASKRKTFVL 453
H + +G V+T G GH D P L+ +LK QV T L
Sbjct: 172 HNHAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFL 231
Query: 452 VDNGCLYGFGWMGFGSLGFPDRGVSDKVLKPSMLYSLKD-HHISQVSTGLYHSVVVTNRG 276
G LY G G LG D D+ P ++ L+ + Q++ G + + VT+ G
Sbjct: 232 TRQGQLYTCGTNTHGQLGHGD--TQDRPT-PKIIELLEGVGSVVQIAAGPSYVLAVTDNG 288
Query: 275 RIFGFGDNERAQLGHDELRDCLNPTEILVEEASDL 171
++ FG LGH E D P I D+
Sbjct: 289 VVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDI 323
>ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 485
Score = 604 bits (1558), Expect(2) = 0.0
Identities = 287/370 (77%), Positives = 325/370 (87%)
Frame = -2
Query: 1283 MQIRSGRYHTLLIKDSTVYSCGSSLCGVLGHGPETTQCVAFTPIKFPYPAHVTHVSASHN 1104
MQI +G+YHTLLI +S+VYSCGS LCGVLG G ETTQCVAFT I FP A V HVSAS N
Sbjct: 114 MQITTGKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFN 173
Query: 1103 HAAFVTQSGKVFTCGDNSSFCCGHSDTSRPIFKPRLVEALKEVPCKQVAAGVSFTVFLTR 924
HAAFV QSG+VFTCGDNSS CCGH DT+RPIF+PRLVE+LK +PCKQVAAG++FTVFLTR
Sbjct: 174 HAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTR 233
Query: 923 EGQVYTCGTSAHGQLGHGDTLDRPTPKLVEALVSVGPVVQIAAGPSYALAVTNDGTVYSF 744
+G VYTCGT+ HGQLGHGDT DRPTPK++E L SV VQIAAGPSY L+VT +GTVYSF
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSV---VQIAAGPSYILSVTENGTVYSF 290
Query: 743 GSGTNFCLGHGEQHNELRPRPLQSFRRKGIHVVRVSAGDEHVVALDSNGYVYTWGKGYCG 564
GSG NFCLGHGEQH+EL+PR +Q FRRKGIH+VRVSAGDEH VALDSNGYVYTWGKGYCG
Sbjct: 291 GSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCG 350
Query: 563 ALGHGDEIDKTTPELLSSLKNHLAVQVCASKRKTFVLVDNGCLYGFGWMGFGSLGFPDRG 384
ALGHGDEI+KTTPELL+SLKN L VQVCA KRKTFVLVD+G +YGFG MGFGSLGF DR
Sbjct: 351 ALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRR 410
Query: 383 VSDKVLKPSMLYSLKDHHISQVSTGLYHSVVVTNRGRIFGFGDNERAQLGHDELRDCLNP 204
VSDKVLKP +L +L+ HH+SQ+STGLYH+VV+T+RG+IFGFGDNERAQLGHD LR CL P
Sbjct: 411 VSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEP 470
Query: 203 TEILVEEASD 174
TEI +++ S+
Sbjct: 471 TEIFIKDVSE 480
Score = 148 bits (373), Expect(2) = 0.0
Identities = 76/112 (67%), Positives = 87/112 (77%)
Frame = -1
Query: 1674 MGDRLRSATLEDLPLHLILEILTSGGRLSGVDLVCLELTNKTFRGTHGLVPNKLKSLVDF 1495
MG+R R ++E+LP HL+LEIL SG RLS +DLVCLELT+KTF G+HGL P K KSLV F
Sbjct: 1 MGERCRHFSIEELPSHLVLEILCSG-RLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAF 59
Query: 1494 AAFQLCGSHPIYTCLSYRAQEELLARCGGNWKRVLRFLQSVHQSSDMVETSA 1339
AAFQLC SH Y + +Q EL RCGGNWKRVLRFLQSV QSS MVETS+
Sbjct: 60 AAFQLCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSS 111