BLASTX nr result

ID: Atractylodes22_contig00003888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003888
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23720.3| unnamed protein product [Vitis vinifera]              320   3e-85
ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261...   310   4e-82
ref|XP_002311696.1| predicted protein [Populus trichocarpa] gi|1...   298   1e-78
ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ri...   294   3e-77
ref|XP_002314506.1| predicted protein [Populus trichocarpa] gi|2...   294   3e-77

>emb|CBI23720.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score =  320 bits (821), Expect = 3e-85
 Identities = 174/269 (64%), Positives = 201/269 (74%), Gaps = 6/269 (2%)
 Frame = -3

Query: 1047 KSKPWPSDPMFLRITSTVPRLQVSSSLYHSLVKTEPI--PLSGKWRVMRIXXXXXXXXXX 874
            +SK  PSD + LRI ST P  +V S + HS V   P+  P+S KWR  RI          
Sbjct: 24   RSKHCPSDAL-LRIIST-PIFKVPS-ISHSHVIDPPLSLPISHKWRAPRISAAVAQEEAA 80

Query: 873  XXXXXXXXXXXXXXXXXXXSGDGDQA----ETDTSVNTKLYFGNLPYLCDSAQLAGIIQD 706
                                 +G+Q       ++ VNTKLYFGNLPY CDSAQLAGIIQ+
Sbjct: 81   ATAPVEEEQQQGQE-------EGEQVLREEGAESPVNTKLYFGNLPYSCDSAQLAGIIQN 133

Query: 705  YGSPELVEVLYNRDTGKSRGFAFVTMSSIEDCKSVIENLDGREYGGRTLRVNFSDKPKPK 526
            YGSPELVEVLYNRDTG+SRGFAFVTMSS+EDC +VIENLDG EYGGRTLRVNFSDKPKPK
Sbjct: 134  YGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPK 193

Query: 525  EPLYPETEYKLFVGNLSWSVTSESLTEMFSQHGNVVGARVLYDGETGRSRGYGFVSYSTK 346
             PLYPETEYKLFVGNLSWSVTSESL ++F ++GNV+GARVLYDGETGRSRGYGFV YSTK
Sbjct: 194  LPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTK 253

Query: 345  SEMETALQVLDGAELEGRAVRVSLAEGKR 259
            +EM+TAL+ L+G ELEGRA+R+SLA+G+R
Sbjct: 254  AEMDTALESLNGVELEGRAIRISLAQGRR 282


>ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
          Length = 751

 Score =  310 bits (795), Expect = 4e-82
 Identities = 170/262 (64%), Positives = 194/262 (74%), Gaps = 6/262 (2%)
 Frame = -3

Query: 1047 KSKPWPSDPMFLRITSTVPRLQVSSSLYHSLVKTEPI--PLSGKWRVMRIXXXXXXXXXX 874
            +SK  PSD + LRI ST P  +V S + HS V   P+  P+S KWR  RI          
Sbjct: 24   RSKHCPSDAL-LRIIST-PIFKVPS-ISHSHVIDPPLSLPISHKWRAPRISAAVAQEEAA 80

Query: 873  XXXXXXXXXXXXXXXXXXXSGDGDQA----ETDTSVNTKLYFGNLPYLCDSAQLAGIIQD 706
                                 +G+Q       ++ VNTKLYFGNLPY CDSAQLAGIIQ+
Sbjct: 81   ATAPVEEEQQQGQE-------EGEQVLREEGAESPVNTKLYFGNLPYSCDSAQLAGIIQN 133

Query: 705  YGSPELVEVLYNRDTGKSRGFAFVTMSSIEDCKSVIENLDGREYGGRTLRVNFSDKPKPK 526
            YGSPELVEVLYNRDTG+SRGFAFVTMSS+EDC +VIENLDG EYGGRTLRVNFSDKPKPK
Sbjct: 134  YGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPK 193

Query: 525  EPLYPETEYKLFVGNLSWSVTSESLTEMFSQHGNVVGARVLYDGETGRSRGYGFVSYSTK 346
             PLYPETEYKLFVGNLSWSVTSESL ++F ++GNV+GARVLYDGETGRSRGYGFV YSTK
Sbjct: 194  LPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTK 253

Query: 345  SEMETALQVLDGAELEGRAVRV 280
            +EM+TAL+ L+G ELEGRA+RV
Sbjct: 254  AEMDTALESLNGVELEGRAIRV 275



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 36/110 (32%), Positives = 58/110 (52%)
 Frame = -3

Query: 597 ENLDGREYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSESLTEMFSQHGNVV 418
           E   G+E G + LR   ++ P            KL+ GNL +S  S  L  +   +G+  
Sbjct: 88  EQQQGQEEGEQVLREEGAESP---------VNTKLYFGNLPYSCDSAQLAGIIQNYGSPE 138

Query: 417 GARVLYDGETGRSRGYGFVSYSTKSEMETALQVLDGAELEGRAVRVSLAE 268
              VLY+ +TGRSRG+ FV+ S+  +    ++ LDG+E  GR +RV+ ++
Sbjct: 139 LVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSD 188


>ref|XP_002311696.1| predicted protein [Populus trichocarpa] gi|118486835|gb|ABK95252.1|
           unknown [Populus trichocarpa]
           gi|222851516|gb|EEE89063.1| predicted protein [Populus
           trichocarpa]
          Length = 279

 Score =  298 bits (764), Expect = 1e-78
 Identities = 145/185 (78%), Positives = 167/185 (90%)
 Frame = -3

Query: 813 GDGDQAETDTSVNTKLYFGNLPYLCDSAQLAGIIQDYGSPELVEVLYNRDTGKSRGFAFV 634
           G+ DQ      VNTKLYFGNLPY  DSAQLAG+IQ+YG+PE+VEVLY+R+TG+SRGFAFV
Sbjct: 98  GEADQVP----VNTKLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFV 153

Query: 633 TMSSIEDCKSVIENLDGREYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSES 454
           TMSSIEDC++VIENLDG +Y GR LRVNF+DKPKPKEPLYPETEYKLF+GNLSWSVTSES
Sbjct: 154 TMSSIEDCETVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEYKLFIGNLSWSVTSES 213

Query: 453 LTEMFSQHGNVVGARVLYDGETGRSRGYGFVSYSTKSEMETALQVLDGAELEGRAVRVSL 274
           LT+ F ++GNVVGARVLYDGETG+SRGYGFV YSTK E+ETALQ L+G ELEGRA+RVSL
Sbjct: 214 LTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETALQSLNGVELEGRALRVSL 273

Query: 273 AEGKR 259
           AEG++
Sbjct: 274 AEGRK 278


>ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532218|gb|EEF34022.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 285

 Score =  294 bits (753), Expect = 3e-77
 Identities = 143/182 (78%), Positives = 165/182 (90%), Gaps = 1/182 (0%)
 Frame = -3

Query: 801 QAETDTS-VNTKLYFGNLPYLCDSAQLAGIIQDYGSPELVEVLYNRDTGKSRGFAFVTMS 625
           +AE + + +NTKLYFGNLPY  DSAQLAGIIQDYG+PELVEVLY+RDTG+SRGFAFVTMS
Sbjct: 103 EAEPEAAPINTKLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMS 162

Query: 624 SIEDCKSVIENLDGREYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSESLTE 445
           ++EDC +VIENLDG ++ GR LRVNFSDKPKPKEPLYPETE+KLFVGNLSWSVTSESL E
Sbjct: 163 TVEDCNAVIENLDGSQFMGRILRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLVE 222

Query: 444 MFSQHGNVVGARVLYDGETGRSRGYGFVSYSTKSEMETALQVLDGAELEGRAVRVSLAEG 265
            F ++GN+VGARVLYDGETGRSRGYGFV Y+T+SEME AL  L+G ELEGRA+RVSLA+G
Sbjct: 223 AFQEYGNIVGARVLYDGETGRSRGYGFVCYATRSEMENALVSLNGVELEGRAMRVSLAQG 282

Query: 264 KR 259
           K+
Sbjct: 283 KK 284


>ref|XP_002314506.1| predicted protein [Populus trichocarpa] gi|222863546|gb|EEF00677.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  294 bits (753), Expect = 3e-77
 Identities = 145/185 (78%), Positives = 166/185 (89%), Gaps = 3/185 (1%)
 Frame = -3

Query: 804 DQAETDTS---VNTKLYFGNLPYLCDSAQLAGIIQDYGSPELVEVLYNRDTGKSRGFAFV 634
           ++A+ +T+   VNTKLYFGNLPY  DSAQLAGIIQ+YGSPE+VEVLY+R+TG+SRGFAFV
Sbjct: 94  EEAKGETNEIPVNTKLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYHRETGRSRGFAFV 153

Query: 633 TMSSIEDCKSVIENLDGREYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSES 454
           TMSSIEDC +VIENLD  +Y GR LRVNFSD PKPKEPLYPETEYKLFVGNLSWS TSES
Sbjct: 154 TMSSIEDCNAVIENLDESQYMGRILRVNFSDNPKPKEPLYPETEYKLFVGNLSWSATSES 213

Query: 453 LTEMFSQHGNVVGARVLYDGETGRSRGYGFVSYSTKSEMETALQVLDGAELEGRAVRVSL 274
           LT+ F ++GNVVGARVLYDGETG+SRGYGFV YSTK+EM+TAL  LDG ELEGRA+RVSL
Sbjct: 214 LTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKAEMQTALVSLDGVELEGRALRVSL 273

Query: 273 AEGKR 259
           AEG++
Sbjct: 274 AEGRK 278


Top