BLASTX nr result

ID: Atractylodes22_contig00003885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003885
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269817.1| PREDICTED: ribonuclease H2 subunit A isoform...    82   1e-15
ref|XP_003536702.1| PREDICTED: ribonuclease H2 subunit A-like is...    80   1e-15
ref|XP_002269852.1| PREDICTED: ribonuclease H2 subunit A isoform...    82   1e-15
ref|XP_003536703.1| PREDICTED: ribonuclease H2 subunit A-like is...    80   1e-15
ref|XP_004152096.1| PREDICTED: ribonuclease H2 subunit A-like [C...    80   1e-15

>ref|XP_002269817.1| PREDICTED: ribonuclease H2 subunit A isoform 1 [Vitis vinifera]
           gi|296086584|emb|CBI32219.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score = 81.6 bits (200), Expect(2) = 1e-15
 Identities = 38/52 (73%), Positives = 42/52 (80%)
 Frame = -3

Query: 176 KVTRRDRALQNWYFDETAENMHRNFGSGYPGDPRTKGWLEHHKHSRHWFASL 21
           KVTR DRAL++W   ETAENMHRNFGSGYPGDP TK WL+HHKHS   F +L
Sbjct: 169 KVTR-DRALRDWVLVETAENMHRNFGSGYPGDPVTKSWLQHHKHSVFGFPTL 219



 Score = 26.2 bits (56), Expect(2) = 1e-15
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 42  PPLVCFTWGTCKSY 1
           P LV F+WGTC +Y
Sbjct: 217 PTLVRFSWGTCTAY 230


>ref|XP_003536702.1| PREDICTED: ribonuclease H2 subunit A-like isoform 1 [Glycine max]
          Length = 297

 Score = 80.1 bits (196), Expect(2) = 1e-15
 Identities = 38/52 (73%), Positives = 40/52 (76%)
 Frame = -3

Query: 176 KVTRRDRALQNWYFDETAENMHRNFGSGYPGDPRTKGWLEHHKHSRHWFASL 21
           KVTR DRAL+ W  DETAENM RNFGSGYPGDP+TK WLE HKH    F SL
Sbjct: 168 KVTR-DRALREWVLDETAENMQRNFGSGYPGDPQTKSWLEDHKHHIFGFPSL 218



 Score = 27.7 bits (60), Expect(2) = 1e-15
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 42  PPLVCFTWGTCKSY 1
           P LV F+WGTC SY
Sbjct: 216 PSLVRFSWGTCNSY 229


>ref|XP_002269852.1| PREDICTED: ribonuclease H2 subunit A isoform 2 [Vitis vinifera]
          Length = 278

 Score = 81.6 bits (200), Expect(2) = 1e-15
 Identities = 38/52 (73%), Positives = 42/52 (80%)
 Frame = -3

Query: 176 KVTRRDRALQNWYFDETAENMHRNFGSGYPGDPRTKGWLEHHKHSRHWFASL 21
           KVTR DRAL++W   ETAENMHRNFGSGYPGDP TK WL+HHKHS   F +L
Sbjct: 150 KVTR-DRALRDWVLVETAENMHRNFGSGYPGDPVTKSWLQHHKHSVFGFPTL 200



 Score = 26.2 bits (56), Expect(2) = 1e-15
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 42  PPLVCFTWGTCKSY 1
           P LV F+WGTC +Y
Sbjct: 198 PTLVRFSWGTCTAY 211


>ref|XP_003536703.1| PREDICTED: ribonuclease H2 subunit A-like isoform 2 [Glycine max]
          Length = 278

 Score = 80.1 bits (196), Expect(2) = 1e-15
 Identities = 38/52 (73%), Positives = 40/52 (76%)
 Frame = -3

Query: 176 KVTRRDRALQNWYFDETAENMHRNFGSGYPGDPRTKGWLEHHKHSRHWFASL 21
           KVTR DRAL+ W  DETAENM RNFGSGYPGDP+TK WLE HKH    F SL
Sbjct: 149 KVTR-DRALREWVLDETAENMQRNFGSGYPGDPQTKSWLEDHKHHIFGFPSL 199



 Score = 27.7 bits (60), Expect(2) = 1e-15
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 42  PPLVCFTWGTCKSY 1
           P LV F+WGTC SY
Sbjct: 197 PSLVRFSWGTCNSY 210


>ref|XP_004152096.1| PREDICTED: ribonuclease H2 subunit A-like [Cucumis sativus]
           gi|449529756|ref|XP_004171864.1| PREDICTED: ribonuclease
           H2 subunit A-like [Cucumis sativus]
          Length = 297

 Score = 80.1 bits (196), Expect(2) = 1e-15
 Identities = 38/52 (73%), Positives = 41/52 (78%)
 Frame = -3

Query: 176 KVTRRDRALQNWYFDETAENMHRNFGSGYPGDPRTKGWLEHHKHSRHWFASL 21
           KVTR DRAL+ W  +ETAENMHRNFGSGYPGDP TK WLE HKHS   F +L
Sbjct: 169 KVTR-DRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 219



 Score = 27.3 bits (59), Expect(2) = 1e-15
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 42  PPLVCFTWGTCKSY 1
           P LV F+WGTC SY
Sbjct: 217 PTLVRFSWGTCTSY 230


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