BLASTX nr result

ID: Atractylodes22_contig00003881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003881
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_563951.1| ubiquitin-conjugating enzyme E2 1 [Arabidopsis ...   226   1e-57
ref|NP_565289.1| ubiquitin-conjugating enzyme E2 A [Arabidopsis ...   226   1e-57
gb|ABC01903.1| ubiquitin carrier-like protein [Solanum tuberosum...   226   2e-57
gb|ADX86831.1| ubiquitin-conjugating enzyme [Paeonia suffruticosa]    226   2e-57
gb|ADX86829.1| ubiquitin-conjugating enzyme [Nicotiana tabacum]       226   2e-57

>ref|NP_563951.1| ubiquitin-conjugating enzyme E2 1 [Arabidopsis thaliana]
           gi|42571469|ref|NP_973825.1| ubiquitin-conjugating
           enzyme E2 1 [Arabidopsis thaliana]
           gi|297849844|ref|XP_002892803.1| hypothetical protein
           ARALYDRAFT_471614 [Arabidopsis lyrata subsp. lyrata]
           gi|136636|sp|P25865.1|UBC1_ARATH RecName:
           Full=Ubiquitin-conjugating enzyme E2 1; AltName:
           Full=Ubiquitin carrier protein 1; AltName:
           Full=Ubiquitin-conjugating enzyme E2-17 kDa 1; AltName:
           Full=Ubiquitin-protein ligase 1 gi|157834522|pdb|2AAK|A
           Chain A, Ubiquitin Conjugating Enzyme From Arabidopsis
           Thaliana gi|7262682|gb|AAF43940.1|AC012188_17 Strong
           similarity to a Ubiquitin-conjugating Enzyme (E2-17 KD
           1) from Arabidopsis thaliana gi|136636 and contains a
           Ubiqutin-conjugating Enzyme PF|00179 domain. ESTs
           gb|AA728508, gb|H36735, gb|AI100736 come from this gene
           [Arabidopsis thaliana]
           gi|12083310|gb|AAG48814.1|AF332451_1 putative E2,
           ubiquitin-conjugating enzyme 1 [Arabidopsis thaliana]
           gi|166924|gb|AAA32903.1| ubiquitin carrier protein
           [Arabidopsis thaliana] gi|431260|gb|AAA32897.1|
           ubiquitin conjugating enzyme [Arabidopsis thaliana]
           gi|17979147|gb|AAL49769.1| putative E2,
           ubiquitin-conjugating enzyme UBC1 [Arabidopsis thaliana]
           gi|20259107|gb|AAM14269.1| putative
           ubiquitin-conjugating enzyme 1 (UBC1) [Arabidopsis
           thaliana] gi|21553917|gb|AAM63000.1| E2,
           ubiquitin-conjugating enzyme UBC1 [Arabidopsis thaliana]
           gi|66354398|gb|AAY44842.1| ubiquitinating enzyme
           [Arabidopsis thaliana] gi|110740882|dbj|BAE98537.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|297338645|gb|EFH69062.1| hypothetical protein
           ARALYDRAFT_471614 [Arabidopsis lyrata subsp. lyrata]
           gi|332191037|gb|AEE29158.1| ubiquitin-conjugating enzyme
           E2 1 [Arabidopsis thaliana] gi|332191038|gb|AEE29159.1|
           ubiquitin-conjugating enzyme E2 1 [Arabidopsis thaliana]
          Length = 152

 Score =  226 bits (577), Expect = 1e-57
 Identities = 106/110 (96%), Positives = 108/110 (98%)
 Frame = +2

Query: 233 MSTAARKRLMRDFKRLQTDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLALQFS 412
           MST ARKRLMRDFKRLQ DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQFS
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 413 EDYPNKPPTVRFISRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 562
           EDYPNKPPTVRF+SRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 110


>ref|NP_565289.1| ubiquitin-conjugating enzyme E2 A [Arabidopsis thaliana]
           gi|297814522|ref|XP_002875144.1| ubiquiting-conjugating
           enzyme 2 [Arabidopsis lyrata subsp. lyrata]
           gi|1174844|sp|P42745.1|UBC2_ARATH RecName:
           Full=Ubiquitin-conjugating enzyme E2 2; AltName:
           Full=Ubiquitin carrier protein 2; AltName:
           Full=Ubiquitin-conjugating enzyme E2-17 kDa 2; AltName:
           Full=Ubiquitin-protein ligase 2
           gi|13899127|gb|AAK48985.1|AF370558_1 putative
           ubiquitin-conjugating enzyme E2 [Arabidopsis thaliana]
           gi|431264|gb|AAA32899.1| ubiquitin conjugating enzyme
           [Arabidopsis thaliana] gi|2689243|emb|CAA73476.1|
           ubiquitin conjugating enzyme [Arabidopsis thaliana]
           gi|2947065|gb|AAC05346.1| E2, ubiquitin-conjugating
           enzyme 2 (UBC2) [Arabidopsis thaliana]
           gi|18377456|gb|AAL66894.1| putative
           ubiquitin-conjugating enzyme E2 [Arabidopsis thaliana]
           gi|66354400|gb|AAY44843.1| ubiquitinating enzyme
           [Arabidopsis thaliana] gi|118197458|gb|ABK78692.1|
           ubiquitin conjugating enzyme [Brassica rapa]
           gi|297320982|gb|EFH51403.1| ubiquiting-conjugating
           enzyme 2 [Arabidopsis lyrata subsp. lyrata]
           gi|312281529|dbj|BAJ33630.1| unnamed protein product
           [Thellungiella halophila] gi|330250527|gb|AEC05621.1|
           ubiquitin-conjugating enzyme E2 A [Arabidopsis thaliana]
          Length = 152

 Score =  226 bits (577), Expect = 1e-57
 Identities = 106/110 (96%), Positives = 108/110 (98%)
 Frame = +2

Query: 233 MSTAARKRLMRDFKRLQTDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLALQFS 412
           MST ARKRLMRDFKRLQ DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQFS
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 413 EDYPNKPPTVRFISRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 562
           EDYPNKPPTVRF+SRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 110


>gb|ABC01903.1| ubiquitin carrier-like protein [Solanum tuberosum]
           gi|352145207|gb|AEQ61924.1| ubiqutin-conjugating enzyme
           3 [Nelumbo nucifera] gi|388512951|gb|AFK44537.1| unknown
           [Lotus japonicus]
          Length = 152

 Score =  226 bits (576), Expect = 2e-57
 Identities = 106/110 (96%), Positives = 107/110 (97%)
 Frame = +2

Query: 233 MSTAARKRLMRDFKRLQTDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLALQFS 412
           MST ARKRLMRDFKRLQ DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL LQFS
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 60

Query: 413 EDYPNKPPTVRFISRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 562
           EDYPNKPPTVRF+SRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 110


>gb|ADX86831.1| ubiquitin-conjugating enzyme [Paeonia suffruticosa]
          Length = 152

 Score =  226 bits (576), Expect = 2e-57
 Identities = 106/110 (96%), Positives = 107/110 (97%)
 Frame = +2

Query: 233 MSTAARKRLMRDFKRLQTDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLALQFS 412
           MST ARKRLMRDFKRLQ DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL LQFS
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 60

Query: 413 EDYPNKPPTVRFISRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 562
           EDYPNKPPTVRF+SRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 110


>gb|ADX86829.1| ubiquitin-conjugating enzyme [Nicotiana tabacum]
          Length = 152

 Score =  226 bits (576), Expect = 2e-57
 Identities = 106/110 (96%), Positives = 107/110 (97%)
 Frame = +2

Query: 233 MSTAARKRLMRDFKRLQTDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLALQFS 412
           MST ARKRLMRDFKRLQ DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL LQFS
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 60

Query: 413 EDYPNKPPTVRFISRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 562
           EDYPNKPPTVRF+SRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 110


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