BLASTX nr result

ID: Atractylodes22_contig00003877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003877
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39565.3| unnamed protein product [Vitis vinifera]              217   2e-54
ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like...   217   2e-54
emb|CAN74413.1| hypothetical protein VITISV_042394 [Vitis vinifera]   216   3e-54
ref|XP_003626171.1| DNA polymerase III polC-type [Medicago trunc...   210   2e-52
ref|XP_003554625.1| PREDICTED: DNA polymerase III polC-type-like...   203   3e-50

>emb|CBI39565.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  217 bits (552), Expect = 2e-54
 Identities = 105/169 (62%), Positives = 138/169 (81%), Gaps = 1/169 (0%)
 Frame = +1

Query: 4   GGVNSTFQTLVNPDKIVTNPQIHGISTYMVNRPGIPRMKDLIPILLRYVKSRQKPGGQTL 183
           GG NSTFQTLVNP++IV NP +HGI+TYMVNRP +PR KDLIPILL+YV+SRQKPGG  L
Sbjct: 155 GGENSTFQTLVNPERIVPNPHVHGITTYMVNRPDVPRWKDLIPILLQYVESRQKPGGLIL 214

Query: 184 LIAHNGKSFDVPFLISEFNRCSYEIPADWIFMDTMSLARELMKATGSKL-PSKSLQTLRV 360
            +AHNG+SFDVPFLI+EF+RC+ E+P +W F+DT+ LAREL+K+ GS L P  SLQ LR 
Sbjct: 215 WVAHNGRSFDVPFLINEFSRCNTEVPPNWRFLDTLPLARELIKSAGSDLPPGASLQALRE 274

Query: 361 YYEIQVIGKAHRAMADVSVLAMVLQRMTRDLKLTVPSLVENYTFTAAEI 507
           YY I ++G AHR ++DV  L+ VLQ +T +LK++V +L++  +FTA++I
Sbjct: 275 YYRIPLVGPAHRVLSDVYTLSQVLQMLTFNLKVSVANLLDR-SFTASDI 322


>ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like isoform 2 [Vitis
           vinifera] gi|225450651|ref|XP_002282855.1| PREDICTED:
           DNA polymerase III polC-type-like isoform 1 [Vitis
           vinifera]
          Length = 337

 Score =  217 bits (552), Expect = 2e-54
 Identities = 105/169 (62%), Positives = 138/169 (81%), Gaps = 1/169 (0%)
 Frame = +1

Query: 4   GGVNSTFQTLVNPDKIVTNPQIHGISTYMVNRPGIPRMKDLIPILLRYVKSRQKPGGQTL 183
           GG NSTFQTLVNP++IV NP +HGI+TYMVNRP +PR KDLIPILL+YV+SRQKPGG  L
Sbjct: 160 GGENSTFQTLVNPERIVPNPHVHGITTYMVNRPDVPRWKDLIPILLQYVESRQKPGGLIL 219

Query: 184 LIAHNGKSFDVPFLISEFNRCSYEIPADWIFMDTMSLARELMKATGSKL-PSKSLQTLRV 360
            +AHNG+SFDVPFLI+EF+RC+ E+P +W F+DT+ LAREL+K+ GS L P  SLQ LR 
Sbjct: 220 WVAHNGRSFDVPFLINEFSRCNTEVPPNWRFLDTLPLARELIKSAGSDLPPGASLQALRE 279

Query: 361 YYEIQVIGKAHRAMADVSVLAMVLQRMTRDLKLTVPSLVENYTFTAAEI 507
           YY I ++G AHR ++DV  L+ VLQ +T +LK++V +L++  +FTA++I
Sbjct: 280 YYRIPLVGPAHRVLSDVYTLSQVLQMLTFNLKVSVANLLDR-SFTASDI 327


>emb|CAN74413.1| hypothetical protein VITISV_042394 [Vitis vinifera]
          Length = 340

 Score =  216 bits (550), Expect = 3e-54
 Identities = 104/169 (61%), Positives = 138/169 (81%), Gaps = 1/169 (0%)
 Frame = +1

Query: 4   GGVNSTFQTLVNPDKIVTNPQIHGISTYMVNRPGIPRMKDLIPILLRYVKSRQKPGGQTL 183
           GG NSTFQTLVNP++IV NP +HGI+TYMVNRP +PR KDLIPILL+YV+SRQKPGG  L
Sbjct: 163 GGENSTFQTLVNPERIVPNPHVHGITTYMVNRPDVPRWKDLIPILLQYVESRQKPGGLIL 222

Query: 184 LIAHNGKSFDVPFLISEFNRCSYEIPADWIFMDTMSLARELMKATGSKLPS-KSLQTLRV 360
            +AHNG+SFDVPFLI+EF+RC+ E+P +W FMDT+ LARE +K+ GS LPS  SLQ LR 
Sbjct: 223 WVAHNGRSFDVPFLINEFSRCNTEVPPNWRFMDTLPLAREFIKSAGSDLPSGASLQALRE 282

Query: 361 YYEIQVIGKAHRAMADVSVLAMVLQRMTRDLKLTVPSLVENYTFTAAEI 507
           Y+ I ++G AHR ++DV  L+ +LQ +T +LK++V +L++  +FTA++I
Sbjct: 283 YFRIPLVGPAHRVLSDVYTLSQILQMLTFNLKVSVANLLDR-SFTASDI 330


>ref|XP_003626171.1| DNA polymerase III polC-type [Medicago truncatula]
           gi|355501186|gb|AES82389.1| DNA polymerase III polC-type
           [Medicago truncatula]
          Length = 332

 Score =  210 bits (535), Expect = 2e-52
 Identities = 101/168 (60%), Positives = 132/168 (78%)
 Frame = +1

Query: 4   GGVNSTFQTLVNPDKIVTNPQIHGISTYMVNRPGIPRMKDLIPILLRYVKSRQKPGGQTL 183
           GG NSTFQT VNP + V N  IHGI+T MV+RPG+PRM+DL+PIL  YVKSR+KP G  L
Sbjct: 156 GGPNSTFQTFVNPQRSVYNSHIHGITTQMVSRPGVPRMEDLVPILFHYVKSREKPRGYVL 215

Query: 184 LIAHNGKSFDVPFLISEFNRCSYEIPADWIFMDTMSLARELMKATGSKLPSKSLQTLRVY 363
            + HN + FDVPF+I+EF RCS +IP +W+F+DT+ LAR+LMK+ G+KLPS SL +LR +
Sbjct: 216 WVGHNARVFDVPFIINEFRRCSTQIPPNWLFVDTLPLARQLMKSEGTKLPSVSLDSLRKF 275

Query: 364 YEIQVIGKAHRAMADVSVLAMVLQRMTRDLKLTVPSLVENYTFTAAEI 507
           YEI+V G AHRAM DV+ L+++L ++T DLKLT+  LVE  +FT A+I
Sbjct: 276 YEIKVDGPAHRAMEDVNTLSLILPKLTCDLKLTLSGLVEK-SFTEADI 322


>ref|XP_003554625.1| PREDICTED: DNA polymerase III polC-type-like [Glycine max]
          Length = 329

 Score =  203 bits (516), Expect = 3e-50
 Identities = 99/168 (58%), Positives = 130/168 (77%)
 Frame = +1

Query: 4   GGVNSTFQTLVNPDKIVTNPQIHGISTYMVNRPGIPRMKDLIPILLRYVKSRQKPGGQTL 183
           GG NSTFQTLVNP   V N  IHGI+T+MVN+PG+PRM+DLIPILL+YV+SR+KPGG  +
Sbjct: 154 GGENSTFQTLVNPQCKVPNSHIHGITTHMVNKPGVPRMEDLIPILLQYVRSREKPGGDVI 213

Query: 184 LIAHNGKSFDVPFLISEFNRCSYEIPADWIFMDTMSLARELMKATGSKLPSKSLQTLRVY 363
            +AHN + FDVPF+I+E  R S EIP +W+F+DT+ LAREL+K+ G+ L S SL  LR  
Sbjct: 214 FVAHNARCFDVPFIINELRRYSVEIPPNWLFLDTLPLARELIKSGGTTLSSTSLAALRDL 273

Query: 364 YEIQVIGKAHRAMADVSVLAMVLQRMTRDLKLTVPSLVENYTFTAAEI 507
           Y I+V G AHRAM DV+ L+++L R+T DLKLT+  LV+  +FT ++I
Sbjct: 274 YGIKVDGSAHRAMVDVNALSLILSRLTSDLKLTLSDLVKK-SFTESDI 320


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