BLASTX nr result

ID: Atractylodes22_contig00003863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003863
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   187   1e-45
ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223...   173   1e-41
ref|XP_003520482.1| PREDICTED: putative SWI/SNF-related matrix-a...   172   2e-41
ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula...   170   1e-40
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   170   1e-40

>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  187 bits (474), Expect = 1e-45
 Identities = 97/148 (65%), Positives = 108/148 (72%), Gaps = 4/148 (2%)
 Frame = +2

Query: 5    DCPICLSPPTEIIITSCAHIFCRTCIVRTLKHSICLCPLCRRRLSESDLFSPPPEYAD-- 178
            DCPIC+SPPT I+IT CAHIFCR CI++TLK +   CPLCR  LS+SDLFS PPE  +  
Sbjct: 629  DCPICISPPTNIVITCCAHIFCRVCILKTLKRTKPCCPLCRHPLSQSDLFSAPPESTETD 688

Query: 179  --EIGASSCKASSKVGTLLKLLEASRDENPSIKSVIFSQFRKXXXXXXXXXKAAGFKTLR 352
              EI +S C  SSKV TLLK L ASRD+NPS KSV+FSQFRK         KAAGFKTLR
Sbjct: 689  NSEIPSSEC-TSSKVLTLLKFLSASRDQNPSTKSVVFSQFRKMLLLLEQPLKAAGFKTLR 747

Query: 353  LDGVMTAKRRAHVIKEFGVATPGGPTVL 436
            LDG M AKRRA VI+EFG   P GPTVL
Sbjct: 748  LDGSMNAKRRAQVIEEFGAPGPNGPTVL 775


>ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223543548|gb|EEF45078.1|
           helicase, putative [Ricinus communis]
          Length = 363

 Score =  173 bits (439), Expect = 1e-41
 Identities = 87/148 (58%), Positives = 104/148 (70%), Gaps = 4/148 (2%)
 Frame = +2

Query: 5   DCPICLSPPTEIIITSCAHIFCRTCIVRTLKHSICLCPLCRRRLSESDLFSPPPEYAD-- 178
           DCPIC+SPP + +IT CAH+FCR CI++TL+     CPLCRR L+ SDLFS PPE +   
Sbjct: 118 DCPICISPPIDTVITRCAHVFCRPCILKTLQRMKPCCPLCRRSLTMSDLFSAPPESSHTD 177

Query: 179 --EIGASSCKASSKVGTLLKLLEASRDENPSIKSVIFSQFRKXXXXXXXXXKAAGFKTLR 352
             EI +S    SSKV  LL LL A+RD+NP+ KSVIFSQF+K         KAAGFK LR
Sbjct: 178 NTEISSSKRNTSSKVSALLNLLMAARDKNPTAKSVIFSQFQKMLVLLEEPLKAAGFKILR 237

Query: 353 LDGVMTAKRRAHVIKEFGVATPGGPTVL 436
           LDG M AK++A VIKEFG+  P GPTVL
Sbjct: 238 LDGTMNAKKKAQVIKEFGIPGPNGPTVL 265


>ref|XP_003520482.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Glycine max]
          Length = 823

 Score =  172 bits (437), Expect = 2e-41
 Identities = 89/149 (59%), Positives = 103/149 (69%), Gaps = 5/149 (3%)
 Frame = +2

Query: 5    DCPICLSPPTEIIITSCAHIFCRTCIVRTLKHSICLCPLCRRRLSESDLFSPPPEYADEI 184
            DCPICLSPP EI+IT CAHIFCR CI+R L++    CPLCRRRL ESDLFS PPE +   
Sbjct: 580  DCPICLSPPIEIVITRCAHIFCRICILRALQNKNPCCPLCRRRLKESDLFSAPPESSKVD 639

Query: 185  GASSCKAS-----SKVGTLLKLLEASRDENPSIKSVIFSQFRKXXXXXXXXXKAAGFKTL 349
             A  C +S     SKV TL+KLL  SRD++P+ KSV+FSQFRK          AAGFKTL
Sbjct: 640  SAGECSSSQTVLPSKVSTLIKLLTESRDQHPAAKSVVFSQFRKLLLLMEEPLNAAGFKTL 699

Query: 350  RLDGVMTAKRRAHVIKEFGVATPGGPTVL 436
            RLDG M AK RA+VI++F      GPTVL
Sbjct: 700  RLDGTMNAKHRANVIEQFQSQGIDGPTVL 728


>ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula]
            gi|124360542|gb|ABN08552.1| SNF2-related; Zinc finger,
            RING-type; ATP-requiring DNA helicase RecQ [Medicago
            truncatula] gi|355499950|gb|AES81153.1| DNA repair
            protein RAD5 [Medicago truncatula]
          Length = 844

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/152 (55%), Positives = 107/152 (70%), Gaps = 8/152 (5%)
 Frame = +2

Query: 5    DCPICLSPPTEIIITSCAHIFCRTCIVRTLKHSICLCPLCRRRLSESDLFSPPPE----- 169
            DCPICLSPPT+I+IT CAHIFCR CI++TL+ S   CPLCRR LSE++LFS PPE     
Sbjct: 594  DCPICLSPPTDIVITCCAHIFCRECILKTLQRSNSSCPLCRRSLSETELFSAPPESFKTD 653

Query: 170  ---YADEIGASSCKASSKVGTLLKLLEASRDENPSIKSVIFSQFRKXXXXXXXXXKAAGF 340
                  E+  +  ++S+KV TL+KLL  SRD+NP+ KSV+FSQFRK         KAAGF
Sbjct: 654  DTDVTTELCTAEVRSSTKVSTLIKLLTESRDQNPATKSVVFSQFRKMLLLLEEPLKAAGF 713

Query: 341  KTLRLDGVMTAKRRAHVIKEFGVATPGGPTVL 436
            KTLRLDG M AK+RA VI++F ++    P +L
Sbjct: 714  KTLRLDGTMNAKQRAQVIEQFQLSEVDEPMIL 745


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222854852|gb|EEE92399.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 799

 Score =  170 bits (430), Expect = 1e-40
 Identities = 88/147 (59%), Positives = 103/147 (70%), Gaps = 3/147 (2%)
 Frame = +2

Query: 5   DCPICLSPPTEIIITSCAHIFCRTCIVRTLKHSICLCPLCRRRLSESDLFSPPPEYADEI 184
           DCPIC+ PPTE +IT CAHIFCR CI++TL+ +   CPLCRR LS SDLFS PPE +   
Sbjct: 554 DCPICICPPTETVITRCAHIFCRPCILKTLQRAKQCCPLCRRPLSVSDLFSAPPESSGSD 613

Query: 185 GASSCK---ASSKVGTLLKLLEASRDENPSIKSVIFSQFRKXXXXXXXXXKAAGFKTLRL 355
            A++      SSKV  L+KLL ASR ENP+ KSV+FSQF+K         K AGFK LRL
Sbjct: 614 NANTSSRTTTSSKVSALIKLLIASRVENPARKSVVFSQFQKMLVLLEEPLKEAGFKILRL 673

Query: 356 DGVMTAKRRAHVIKEFGVATPGGPTVL 436
           DG M AK+RA VIK+FGV  P GPTVL
Sbjct: 674 DGSMNAKKRAQVIKQFGVPGPDGPTVL 700


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