BLASTX nr result

ID: Atractylodes22_contig00003853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003853
         (1211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524867.1| cysteine synthase, putative [Ricinus communi...    66   2e-08
emb|CAA57498.1| cysteine synthase [Arabidopsis thaliana]               60   2e-08
ref|XP_003632085.1| PREDICTED: cysteine synthase, chloroplastic/...    64   6e-08
ref|XP_002277485.1| PREDICTED: cysteine synthase, chloroplastic/...    64   6e-08
ref|XP_002330649.1| predicted protein [Populus trichocarpa] gi|2...    64   8e-08

>ref|XP_002524867.1| cysteine synthase, putative [Ricinus communis]
            gi|223535830|gb|EEF37491.1| cysteine synthase, putative
            [Ricinus communis]
          Length = 408

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 31/47 (65%), Positives = 41/47 (87%)
 Frame = +3

Query: 1071 LSNVGADIVLTDSSMGIK*AVQKADKIVNSTPHAHMLQQFDDPANPK 1211
            L   GA++VLTDS+ G+K AVQKA++I+ STP+A+MLQQFD+PANPK
Sbjct: 195  LKAFGAELVLTDSAKGMKGAVQKAEEILKSTPNAYMLQQFDNPANPK 241


>emb|CAA57498.1| cysteine synthase [Arabidopsis thaliana]
          Length = 424

 Score = 60.1 bits (144), Expect(2) = 2e-08
 Identities = 28/47 (59%), Positives = 38/47 (80%)
 Frame = +3

Query: 1071 LSNVGADIVLTDSSMGIK*AVQKADKIVNSTPHAHMLQQFDDPANPK 1211
            L   GA++VLTD + G+  AVQKA++I+ +TP A+MLQQFD+PANPK
Sbjct: 210  LKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPK 256



 Score = 25.4 bits (54), Expect(2) = 2e-08
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 911  CLNSLDKDGNNMIVDAEEKGEEKGITTPGK 1000
            C +  D+ G +M+ DA    E+KG  +PGK
Sbjct: 144  CCSVKDRIGYSMVTDA----EQKGFISPGK 169


>ref|XP_003632085.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic isoform 2
            [Vitis vinifera]
          Length = 373

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 30/47 (63%), Positives = 40/47 (85%)
 Frame = +3

Query: 1071 LSNVGADIVLTDSSMGIK*AVQKADKIVNSTPHAHMLQQFDDPANPK 1211
            L   GA++VLTD + G+K AVQKA++I+ STP+A+MLQQFD+PANPK
Sbjct: 169  LKAFGAELVLTDPAKGMKGAVQKAEEILKSTPNAYMLQQFDNPANPK 215


>ref|XP_002277485.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic isoform 1
            [Vitis vinifera] gi|296084309|emb|CBI24697.3| unnamed
            protein product [Vitis vinifera]
          Length = 382

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 30/47 (63%), Positives = 40/47 (85%)
 Frame = +3

Query: 1071 LSNVGADIVLTDSSMGIK*AVQKADKIVNSTPHAHMLQQFDDPANPK 1211
            L   GA++VLTD + G+K AVQKA++I+ STP+A+MLQQFD+PANPK
Sbjct: 169  LKAFGAELVLTDPAKGMKGAVQKAEEILKSTPNAYMLQQFDNPANPK 215


>ref|XP_002330649.1| predicted protein [Populus trichocarpa] gi|222872253|gb|EEF09384.1|
            predicted protein [Populus trichocarpa]
          Length = 336

 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 29/43 (67%), Positives = 39/43 (90%)
 Frame = +3

Query: 1083 GADIVLTDSSMGIK*AVQKADKIVNSTPHAHMLQQFDDPANPK 1211
            GA++VLTD++ G+K AVQKA++IV  TP+A+MLQQFD+PANPK
Sbjct: 128  GAELVLTDAAKGMKGAVQKAEEIVKRTPNAYMLQQFDNPANPK 170


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